EWM25124.1, cds5556 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|585106762|gb|EWM25124.1| (beclin 1 [Nannochloropsis gaditana]) HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MPSEGDGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSARHVLL 280
MPSEGDGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSARHVLL
Sbjct: 1 MPSEGDGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSARHVLL 280
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|553196242|ref|XP_005856298.1| (beclin 1, partial [Nannochloropsis gaditana CCMP526] >gi|422292776|gb|EKU20078.1| beclin 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 342.043 bits (876), Expect = 1.888e-115 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MPSEGDGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDL 168
MPSEGDGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDL
Sbjct: 1 MPSEGDGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDL 168
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|298705864|emb|CBJ29009.1| (Beclin [Ectocarpus siliculosus]) HSP 1 Score: 170.244 bits (430), Expect = 1.346e-46 Identity = 98/257 (38.13%), Postives = 141/257 (54.86%), Query Frame = 0
Query: 24 ARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNK--IGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSARHV 278
+RRI L RR+ V + R+ + S +A + +L + R+ AL NDCFH+WH GPF T+NG +GRL V+W ++NAG+GQA ++L T+ G F + + P GSF+KI RS R+ S + DE + + FPRRN N AL AFL C+ E G HV+ DPT+RLP+ ++ + +GGLP+ L ED W RALKY+LTDLKW++AW+A+++
Sbjct: 205 SRRIALDSRRSDVAEARQNCR----------------------SRKALYSEQLVSAMRMGAL------NDCFHIWHQGPFGTINGFRVGRLNTHV-VDWQEVNAGVGQAAIVLVTVAMAMGVEFTKYLIAPCGSFTKIARS-------------EDGRVL----YSLHTDE-SFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGSSYED-WTRALKYMLTDLKWIAAWAAKYL 413
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|1026987182|ref|XP_016608509.1| (hypothetical protein SPPG_04786 [Spizellomyces punctatus DAOM BR117] >gi|907094726|gb|KND00470.1| hypothetical protein SPPG_04786 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 164.851 bits (416), Expect = 4.934e-44 Identity = 94/275 (34.18%), Postives = 144/275 (52.36%), Query Frame = 0
Query: 9 EAHILHLREK-------LKAVEARRITLHRRRALVEKKRRRLQGL-LDLWQSLNNSAAEALLDLSESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLA--FFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAW 273
EA ++ L+E+ LK +E ++ L + + + + L L+ WQ +N+ E +E E + +LE L + NV ND F +WH GPF T+NG +GRLP V+W++INA +GQA+LLLDT+ + F F+ LVP GSFS+I ++ D + Y +L F R + ALV+FL C+++ G + E DP RLP+R+ +KIG I L +++ W +ALKY+L DLKW+ A+
Sbjct: 208 EADVVMLKEQERNALDVLKDLEKEKVALKEELEVAKTELEEVDALKLNYWQEINSLQDELQKYYNERDSVNLNYEYVSN-QLEKLKKTNVYNDTFRIWHDGPFGTINGFRMGRLPN-QPVDWSEINAAMGQALLLLDTMASKLNFTFKGYRLVPMGSFSRIEKTDGD------------------KGVHELYGSGDLKGMLFWNRRFDNALVSFLNCLQQIGDYAEQRDPKFRLPYRISKDKIGDTSIRLQFNQDEAWTKALKYMLIDLKWILAF 462
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|953488727|emb|CEG47593.1| (beclin-1-like protein [Plasmopara halstedii]) HSP 1 Score: 167.162 bits (422), Expect = 6.200e-44 Identity = 106/278 (38.13%), Postives = 146/278 (52.52%), Query Frame = 0
Query: 6 DGPEAHILHLREKLKAVEARRITLHRRRALVEKKRRRLQGL-LDLWQSLNNSAAEA-----LLDLS-ESHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSAR 276
D PE L L+E+ + + A+ + V KRR L +DL Q ++ + AE LL LS + Q+ + A L L + NV ND FH+WH G F T+NG +GRLP VEW +INA LGQA+LLL T+ + F F R LVP GSFS+++ S Y D F RR N A++ FL+CVE+ G +P+++ P++V+ KIGGLPI L G ++ W RALKY+LT LKWL AW ++
Sbjct: 366 DDPE--FLALQEEERVLNAQLRAIEDETLQVTAKRRELWSTGMDLEQLIHGTFAEGAFLQHLLGLSRDERQSVSVFAVHASDMLRRLQRYNVCNDVFHIWHDGLFGTINGLRLGRLP-LKPVEWVEINAALGQAVLLLATIADRANFEFSRNRLVPRGSFSRVVN-------------------MYGKEYSLYSDG---GMFRRRGFNQAMILFLECVEDAGRRAMKEEPSLKFPYKVERGKIGGLPISL--GNDEQWTRALKYMLTHLKWLLAWISK 616
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|970659578|gb|KUF97206.1| (hypothetical protein AM588_10006678 [Phytophthora nicotianae]) HSP 1 Score: 162.925 bits (411), Expect = 2.743e-43 Identity = 99/248 (39.92%), Postives = 134/248 (54.03%), Query Frame = 0
Query: 36 VEKKRRRLQGL-LDLWQSLNNSAAEA-----LLDLSESHQATHGS-ELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSAR 276
V KRR L +DL Q ++ + AE LL LS + + G + A L L + NV ND FH+WH G F T+NG +GRLP+ VEW +INA LGQA+LLL T+ + F F R LVP GSFS+++ S Y D F RR N A++ FL+CVE+ G +P+++ P++V+ KIGGLPI L G ++ W RALKY+LT LKWL AW ++
Sbjct: 246 VTAKRRELWSTGMDLEQLIHGTFAEGAFLQHLLGLSRDERQSVGVFAVHASDMLRRLQRYNVCNDVFHIWHDGLFGTINGLRLGRLPS-KPVEWVEINAALGQAVLLLATIADRANFEFSRNRLVPRGSFSRVVN-------------------MYGKEYSLYSDG---GMFRRRGFNQAMILFLECVEDAGRRAMKEEPSLKFPYKVERGKIGGLPISL--GNDEQWTRALKYMLTHLKWLLAWISK 468
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|970639630|gb|KUF82566.1| (Beclin-1 protein [Phytophthora nicotianae]) HSP 1 Score: 162.925 bits (411), Expect = 9.884e-43 Identity = 99/248 (39.92%), Postives = 134/248 (54.03%), Query Frame = 0
Query: 36 VEKKRRRLQGL-LDLWQSLNNSAAEA-----LLDLSESHQATHGS-ELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSAR 276
V KRR L +DL Q ++ + AE LL LS + + G + A L L + NV ND FH+WH G F T+NG +GRLP+ VEW +INA LGQA+LLL T+ + F F R LVP GSFS+++ S Y D F RR N A++ FL+CVE+ G +P+++ P++V+ KIGGLPI L G ++ W RALKY+LT LKWL AW ++
Sbjct: 340 VTAKRRELWSTGMDLEQLIHGTFAEGAFLQHLLGLSRDERQSVGVFAVHASDMLRRLQRYNVCNDVFHIWHDGLFGTINGLRLGRLPS-KPVEWVEINAALGQAVLLLATIADRANFEFSRNRLVPRGSFSRVVN-------------------MYGKEYSLYSDG---GMFRRRGFNQAMILFLECVEDAGRRAMKEEPSLKFPYKVERGKIGGLPISL--GNDEQWTRALKYMLTHLKWLLAWISK 562
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|970618298|gb|KUF66358.1| (Beclin-1 protein [Phytophthora nicotianae]) HSP 1 Score: 162.925 bits (411), Expect = 1.081e-42 Identity = 102/268 (38.06%), Postives = 142/268 (52.99%), Query Frame = 0
Query: 16 REKLKAVEARRITLHRRRALVEKKRRRLQGL-LDLWQSLNNSAAEA-----LLDLSESHQATHGS-ELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSAR 276
+ +L+A+E + V KRR L +DL Q ++ + AE LL LS + + G + A L L + NV ND FH+WH G F T+NG +GRLP+ VEW +INA LGQA+LLL T+ + F F R LVP GSFS+++ S Y D F RR N A++ FL+CVE+ G +P+++ P++V+ KIGGLPI L G ++ W RALKY+LT LKWL AW ++
Sbjct: 314 KAELEAIEDETVQ-------VTAKRRELWSTGMDLEQLIHGTFAEGAFLQHLLGLSRDERQSVGVFAVHASDMLRRLQRYNVCNDVFHIWHDGLFGTINGLRLGRLPS-KPVEWVEINAALGQAVLLLATIADRANFEFSRNRLVPRGSFSRVVN-------------------MYGKEYSLYSDG---GMFRRRGFNQAMILFLECVEDAGRRAMKEEPSLKFPYKVERGKIGGLPISL--GNDEQWTRALKYMLTHLKWLLAWISK 549
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|568039367|gb|ETM36863.1| (hypothetical protein L914_16512 [Phytophthora parasitica]) HSP 1 Score: 162.925 bits (411), Expect = 2.321e-42 Identity = 102/268 (38.06%), Postives = 142/268 (52.99%), Query Frame = 0
Query: 16 REKLKAVEARRITLHRRRALVEKKRRRLQGL-LDLWQSLNNSAAEA-----LLDLSESHQATHGS-ELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSAR 276
+ +L+A+E + V KRR L +DL Q ++ + AE LL LS + + G + A L L + NV ND FH+WH G F T+NG +GRLP+ VEW +INA LGQA+LLL T+ + F F R LVP GSFS+++ S Y D F RR N A++ FL+CVE+ G +P+++ P++V+ KIGGLPI L G ++ W RALKY+LT LKWL AW ++
Sbjct: 389 KAELEAIEDETVQ-------VTAKRRELWSTGMDLEQLIHGTFAEGAFLQHLLGLSRDERQSVGVFAVHASDMLRRLQRYNVCNDVFHIWHDGLFGTINGLRLGRLPS-KPVEWVEINAALGQAVLLLATIADRANFEFSRNRLVPRGSFSRVVN-------------------MYGKEYSLYSDG---GMFRRRGFNQAMILFLECVEDAGRRAMKEEPSLKFPYKVERGKIGGLPISL--GNDEQWTRALKYMLTHLKWLLAWISK 624
BLAST of EWM25124.1 vs. NCBI_GenBank
Match: gi|570971579|gb|ETP34698.1| (hypothetical protein F442_17010 [Phytophthora parasitica P10297]) HSP 1 Score: 162.925 bits (411), Expect = 2.569e-42 Identity = 102/268 (38.06%), Postives = 142/268 (52.99%), Query Frame = 0
Query: 16 REKLKAVEARRITLHRRRALVEKKRRRLQGL-LDLWQSLNNSAAEA-----LLDLSESHQATHGS-ELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWTDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKLMPNSPRITASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQGNKIGGLPIVLTPGEEDTWNRALKYLLTDLKWLSAWSAR 276
+ +L+A+E + V KRR L +DL Q ++ + AE LL LS + + G + A L L + NV ND FH+WH G F T+NG +GRLP+ VEW +INA LGQA+LLL T+ + F F R LVP GSFS+++ S Y D F RR N A++ FL+CVE+ G +P+++ P++V+ KIGGLPI L G ++ W RALKY+LT LKWL AW ++
Sbjct: 389 KAELEAIEDETVQ-------VTAKRRELWSTGMDLEQLIHGTFAEGAFLQHLLGLSRDERQSVGVFAVHASDMLRRLQRYNVCNDVFHIWHDGLFGTINGLRLGRLPS-KPVEWVEINAALGQAVLLLATIADRANFEFSRNRLVPRGSFSRVVN-------------------MYGKEYSLYSDG---GMFRRRGFNQAMILFLECVEDAGRRAMKEEPSLKFPYKVERGKIGGLPISL--GNDEQWTRALKYMLTHLKWLLAWISK 624 The following BLAST results are available for this feature:
BLAST of EWM25124.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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