EWM30118.1, cds555 (CDS) Nannochloropsis gaditana

Overview
NameEWM30118.1
Unique Namecds555
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1381141..1381820 -
Alignment locationCM002455.1:1380096..1380960 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30118.1
Productserine threonine kinase
Orig transcript idgnl|cribi|Naga_101095g1.7262.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1381141..1381820 -
CM002455.1supercontigCM002455.1:1380096..1380960 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|585112764|gb|EWM30117.1| (serine threonine kinase [Nannochloropsis gaditana] >gi|585112765|gb|EWM30118.1| serine threonine kinase [Nannochloropsis gaditana])

HSP 1 Score: 1048.88 bits (2711), Expect = 0.000e+0
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0 
Query:    1 MEQNAGMTQRHPHGDGVVADRAAFESKYQFVRAIGDGGQAGVYEYRRREAPEERVAVKEFGSLTSREWRILAAVRHPHICGLVDAARYENPRVRTTKIVVDCMDMNLQSFLQARQRLAGKRGKPSVGENKENRSTACVSGNDKQEGRCMGKGNLPWFDKALLQQQEKEQRRLHKAKKGREGWDEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPEVDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDTLLGDLVDESEKAARVMLLSIRRGQGKTRASGKESRRSGVRGGATPWKWKGSKLVLRPPLLLPPPHPPRGFPPSPPPVPSPAPSWLRNPHRCPCTPPTWTWRRSTMFGPPW 514
            MEQNAGMTQRHPHGDGVVADRAAFESKYQFVRAIGDGGQAGVYEYRRREAPEERVAVKEFGSLTSREWRILAAVRHPHICGLVDAARYENPRVRTTKIVVDCMDMNLQSFLQARQRLAGKRGKPSVGENKENRSTACVSGNDKQEGRCMGKGNLPWFDKALLQQQEKEQRRLHKAKKGREGWDEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPEVDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDTLLGDLVDESEKAARVMLLSIRRGQGKTRASGKESRRSGVRGGATPWKWKGSKLVLRPPLLLPPPHPPRGFPPSPPPVPSPAPSWLRNPHRCPCTPPTWTWRRSTMFGPPW
Sbjct:    1 MEQNAGMTQRHPHGDGVVADRAAFESKYQFVRAIGDGGQAGVYEYRRREAPEERVAVKEFGSLTSREWRILAAVRHPHICGLVDAARYENPRVRTTKIVVDCMDMNLQSFLQARQRLAGKRGKPSVGENKENRSTACVSGNDKQEGRCMGKGNLPWFDKALLQQQEKEQRRLHKAKKGREGWDEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPEVDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDTLLGDLVDESEKAARVMLLSIRRGQGKTRASGKESRRSGVRGGATPWKWKGSKLVLRPPLLLPPPHPPRGFPPSPPPVPSPAPSWLRNPHRCPCTPPTWTWRRSTMFGPPW 514
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|553192347|ref|XP_005855556.1| (hypothetical protein NGA_0593900 [Nannochloropsis gaditana CCMP526] >gi|422293505|gb|EKU20805.1| hypothetical protein NGA_0593900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 273.092 bits (697), Expect = 2.003e-86
Identity = 152/201 (75.62%), Postives = 158/201 (78.61%), Query Frame = 0 
Query:    7 MTQRHPHGDGVVADRAAFESKYQFVRAIGDGGQAGVYEYRRREAPEERVAVKEFGSLTSREWRILAAVRHPHICGLVDAARYENPRVRTTKIVVDCMDMNLQSFLQARQRLAGKRGKPSVGENKENRSTACVSGNDKQEGRCMGKGNLPWFDKALLQQQEKEQRRLHKAKKGREGWDEGEGEDSNLLKAAMDVETVREILY 207
            MTQ+ PHGDGVVADRAAFE+KYQFVRAIGDGGQAGVYEYRRR APE+RVAVKEFGSLTSREWRILAAVRHPHICGLVD ARYENPRVRTTKIVVDCMDMNLQSFLQARQR AGK GKPSV ENK+N+S  C                           QEKEQRRLHK KK   GWD GEGE  NL KAAMDVETVREIL+
Sbjct:    1 MTQQRPHGDGVVADRAAFEAKYQFVRAIGDGGQAGVYEYRRRAAPEKRVAVKEFGSLTSREWRILAAVRHPHICGLVDEARYENPRVRTTKIVVDCMDMNLQSFLQARQRHAGKEGKPSVEENKKNKSADC---------------------------QEKEQRRLHKVKK--GGWDGGEGEGLNLPKAAMDVETVREILH 172
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1126199557|ref|XP_019633051.1| (PREDICTED: serine/threonine-protein kinase 33-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 83.5741 bits (205), Expect = 2.320e-13
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0 
Query:  183 DEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDT 404
            + GE +D    K +   E  + I+  +  A+ YLH    VH D+KL+NIL+R D   K       E   L++K++DFGL+++ G +               GS   + D            GT  YMAPEV  +  +  Q D++S+GV++++LL  G  P  A  E  +     +G+    E       +  +S++ +ML  DP  R  A  IL HP++  +  DG++
Sbjct:  132 ESGELKDYFDKKGSFSEEETKHIIKNLASAIAYLHKNDTVHRDLKLENILVRPDESSKEESEERAEQDLLNVKISDFGLSIVKGRS---------------GSDSMMQD----------VCGTPIYMAPEVLNNHDYSQQCDVWSIGVIMYMLL-AGHPPFFAKEEEKLYDLIKKGELDFSEPVWEDISEDAKSILSSMLRVDPAHRLTASQILDHPWVTGL--DGNS 331
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1126199563|ref|XP_019633054.1| (PREDICTED: serine/threonine-protein kinase 33-like isoform X5 [Branchiostoma belcheri])

HSP 1 Score: 83.1889 bits (204), Expect = 2.661e-13
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0 
Query:  183 DEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDT 404
            + GE +D    K +   E  + I+  +  A+ YLH    VH D+KL+NIL+R D   K       E   L++K++DFGL+++ G +               GS   + D            GT  YMAPEV  +  +  Q D++S+GV++++LL  G  P  A  E  +     +G+    E       +  +S++ +ML  DP  R  A  IL HP++  +  DG++
Sbjct:  109 ESGELKDYFDKKGSFSEEETKHIIKNLASAIAYLHKNDTVHRDLKLENILVRPDESSKEESEERAEQDLLNVKISDFGLSIVKGRS---------------GSDSMMQD----------VCGTPIYMAPEVLNNHDYSQQCDVWSIGVIMYMLL-AGHPPFFAKEEEKLYDLIKKGELDFSEPVWEDISEDAKSILSSMLRVDPAHRLTASQILDHPWVTGL--DGNS 308
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1126199559|ref|XP_019633052.1| (PREDICTED: serine/threonine-protein kinase 33-like isoform X3 [Branchiostoma belcheri])

HSP 1 Score: 83.1889 bits (204), Expect = 2.819e-13
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0 
Query:  183 DEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDT 404
            + GE +D    K +   E  + I+  +  A+ YLH    VH D+KL+NIL+R D   K       E   L++K++DFGL+++ G +               GS   + D            GT  YMAPEV  +  +  Q D++S+GV++++LL  G  P  A  E  +     +G+    E       +  +S++ +ML  DP  R  A  IL HP++  +  DG++
Sbjct:  145 ESGELKDYFDKKGSFSEEETKHIIKNLASAIAYLHKNDTVHRDLKLENILVRPDESSKEESEERAEQDLLNVKISDFGLSIVKGRS---------------GSDSMMQD----------VCGTPIYMAPEVLNNHDYSQQCDVWSIGVIMYMLL-AGHPPFFAKEEEKLYDLIKKGELDFSEPVWEDISEDAKSILSSMLRVDPAHRLTASQILDHPWVTGL--DGNS 344
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|290986167|ref|XP_002675796.1| (predicted protein [Naegleria gruberi] >gi|284089394|gb|EFC43052.1| predicted protein [Naegleria gruberi])

HSP 1 Score: 83.9593 bits (206), Expect = 3.217e-13
Identity = 77/236 (32.63%), Postives = 107/236 (45.34%), Query Frame = 0 
Query:  191 NLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAML-------LGGTSPCPPSPSPSPPRAPG----SPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE-------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDTLLGD 408
            N  +AA D++ VR+I+  + LAL  LH   IVH D+K DN+L  +DS            GRL  KL DFGL+ +          TS  P +P+PS P  P     SP +  + E++        GT  Y+APE+ F        D +SLG + + LL G   P  A     +  +   G    PE         G+   V+ +L  +P  R     I  HPFL P+  D DTLL +
Sbjct: 1167 NKHQAAFDIDKVRKIVAEIVLALLELHAAKIVHRDLKPDNML--VDSM-----------GRL--KLTDFGLSEIGIMDREEKAVTSSKPRTPNPSSPPHPASFVTSPNASIESESDSDDMVQVPGTPDYIAPEILFGEEHSYAVDYWSLGCITYELLFGVP-PFNADTVEDIFNNILSGSYEWPEELPEEFQTSGVEDFVKKLLDQNPKTRLGGEIIKEHPFLKPI--DWDTLLQE 1384
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1126199555|ref|XP_019633050.1| (PREDICTED: serine/threonine-protein kinase 33-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 82.8037 bits (203), Expect = 3.786e-13
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0 
Query:  183 DEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDT 404
            + GE +D    K +   E  + I+  +  A+ YLH    VH D+KL+NIL+R D   K       E   L++K++DFGL+++ G +               GS   + D            GT  YMAPEV  +  +  Q D++S+GV++++LL  G  P  A  E  +     +G+    E       +  +S++ +ML  DP  R  A  IL HP++  +  DG++
Sbjct:  145 ESGELKDYFDKKGSFSEEETKHIIKNLASAIAYLHKNDTVHRDLKLENILVRPDESSKEESEERAEQDLLNVKISDFGLSIVKGRS---------------GSDSMMQD----------VCGTPIYMAPEVLNNHDYSQQCDVWSIGVIMYMLL-AGHPPFFAKEEEKLYDLIKKGELDFSEPVWEDISEDAKSILSSMLRVDPAHRLTASQILDHPWVTGL--DGNS 344
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1126199561|ref|XP_019633053.1| (PREDICTED: serine/threonine-protein kinase 33-like isoform X4 [Branchiostoma belcheri])

HSP 1 Score: 82.4185 bits (202), Expect = 4.540e-13
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0 
Query:  183 DEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDT 404
            + GE +D    K +   E  + I+  +  A+ YLH    VH D+KL+NIL+R D   K       E   L++K++DFGL+++ G +               GS   + D            GT  YMAPEV  +  +  Q D++S+GV++++LL  G  P  A  E  +     +G+    E       +  +S++ +ML  DP  R  A  IL HP++  +  DG++
Sbjct:  145 ESGELKDYFDKKGSFSEEETKHIIKNLASAIAYLHKNDTVHRDLKLENILVRPDESSKEESEERAEQDLLNVKISDFGLSIVKGRS---------------GSDSMMQD----------VCGTPIYMAPEVLNNHDYSQQCDVWSIGVIMYMLL-AGHPPFFAKEEEKLYDLIKKGELDFSEPVWEDISEDAKSILSSMLRVDPAHRLTASQILDHPWVTGL--DGNS 344
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1126199565|ref|XP_019633056.1| (PREDICTED: serine/threonine-protein kinase 33-like isoform X6 [Branchiostoma belcheri])

HSP 1 Score: 82.4185 bits (202), Expect = 4.833e-13
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0 
Query:  183 DEGEGEDSNLLKAAMDVETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGGRFPQTALGEPAVLRDDAEGKGTIPE------VDGLRSLVQAMLHGDPYRRPHAFHILAHPFLAPVRRDGDT 404
            + GE +D    K +   E  + I+  +  A+ YLH    VH D+KL+NIL+R D   K       E   L++K++DFGL+++ G +               GS   + D            GT  YMAPEV  +  +  Q D++S+GV++++LL  G  P  A  E  +     +G+    E       +  +S++ +ML  DP  R  A  IL HP++  +  DG++
Sbjct:  145 ESGELKDYFDKKGSFSEEETKHIIKNLASAIAYLHKNDTVHRDLKLENILVRPDESSKEESEERAEQDLLNVKISDFGLSIVKGRS---------------GSDSMMQD----------VCGTPIYMAPEVLNNHDYSQQCDVWSIGVIMYMLL-AGHPPFFAKEEEKLYDLIKKGELDFSEPVWEDISEDAKSILSSMLRVDPAHRLTASQILDHPWVTGL--DGNS 344
[Close]
BLAST of EWM30118.1 vs. NCBI_GenBank
Match: gi|1101647155|ref|XP_018922833.1| (PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase 33-like [Cyprinus carpio])

HSP 1 Score: 80.1073 bits (196), Expect = 1.477e-12
Identity = 59/203 (29.06%), Postives = 100/203 (49.26%), Query Frame = 0 
Query:  200 ETVREILYAVTLALDYLHHKLIVHLDIKLDNILLRLDSQDKSSIARDPESGRLSIKLADFGLAMLLGGTSPCPPSPSPSPPRAPGSPPSLPDPETEHTPRFAAAGTCHYMAPEVEFDSRFGVQADIFSLGVVLHVLLTGG----RFPQTALGEPAVLRDDAEGKGTIPEV--DGLRSLVQAMLHGDPYRRPHAFHILAHPFLA 396
            E  R I+ +++ A+ YLH K IVH D+KL+NIL++       S  +  ++G ++IK+ DFGL++  GG                GS   L           A  GT  YMAPEV    ++  Q D++S+GV+++ LL G        +  L E  +++ +    G +     D  ++++Q +L  DP  R  A  +L +P+++
Sbjct:  141 EETRHIIKSLSEAIVYLHKKDIVHRDLKLENILVK-------SFLQGNDNGMVNIKITDFGLSVQKGGV---------------GSENMLQ----------ATCGTPIYMAPEVVNGHQYSQQCDLWSIGVIMYTLLCGEPPFISSSKERLSE-MIMKGELTFSGPVWHTISDAAKAVIQCLLKVDPAHRITANELLDNPWIS 310
The following BLAST results are available for this feature:
BLAST of EWM30118.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112764|gb|EWM30117.1|0.000e+0100.00serine threonine kinase [Nannochloropsis gaditana]... [more]
gi|553192347|ref|XP_005855556.1|2.003e-8675.62hypothetical protein NGA_0593900 [Nannochloropsis ... [more]
gi|1126199557|ref|XP_019633051.1|2.320e-1328.95PREDICTED: serine/threonine-protein kinase 33-like... [more]
gi|1126199563|ref|XP_019633054.1|2.661e-1328.95PREDICTED: serine/threonine-protein kinase 33-like... [more]
gi|1126199559|ref|XP_019633052.1|2.819e-1328.95PREDICTED: serine/threonine-protein kinase 33-like... [more]
gi|290986167|ref|XP_002675796.1|3.217e-1332.63predicted protein [Naegleria gruberi] >gi|28408939... [more]
gi|1126199555|ref|XP_019633050.1|3.786e-1328.95PREDICTED: serine/threonine-protein kinase 33-like... [more]
gi|1126199561|ref|XP_019633053.1|4.540e-1328.95PREDICTED: serine/threonine-protein kinase 33-like... [more]
gi|1126199565|ref|XP_019633056.1|4.833e-1328.95PREDICTED: serine/threonine-protein kinase 33-like... [more]
gi|1101647155|ref|XP_018922833.1|1.477e-1229.06PREDICTED: LOW QUALITY PROTEIN: serine/threonine-p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna555rna555Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications