EWM25127.1, cds5544 (CDS) Nannochloropsis gaditana

Overview
NameEWM25127.1
Unique Namecds5544
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:283993..284154 +
Alignment locationCM002466.1:284336..285991 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25127.1
Productviolaxanthin de-epoxidase
Orig transcript idgnl|cribi|Naga_100016g50.2936.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:283993..284154 +
CM002466.1supercontigCM002466.1:284336..285991 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0009507chloroplast
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0046422violaxanthin de-epoxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR011038Calycin-like
IPR012674Calycin
IPR010788VDE
Homology
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|553196165|ref|XP_005856280.1| (violaxanthin de-epoxidase, partial [Nannochloropsis gaditana CCMP526] >gi|422292758|gb|EKU20060.1| violaxanthin de-epoxidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1266.52 bits (3276), Expect = 0.000e+0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0
Query:    1 MPLLCPCSGENKKEVMRDKVHQGREEIIRTKRRRRGRRRTMLSYTLAINVVLSMVVFGLMLGGSAFVIPRCSIRVRPRIVSAMTMTMAENRARISKQNCAFREHDVGYEERKGKRSITQPARLSSDTSHTPDIAITIVHHLRSYLPKVALLILSGGWMGVSGGGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPGSAAGDTDGSAKTAGPAPPVNAATITAFTAQMEKGQSSSTDRGGFLPAFIDISAEKIPQ 605
            MPLLCPCSGENKKEVMRDKVHQGREEIIRTKRRRRGRRRTMLSYTLAINVVLSMVVFGLMLGGSAFVIPRCSIRVRPRIVSAMTMTMAENRARISKQNCAFREHDVGYEERKGKRSITQPARLSSDTSHTPDIAITIVHHLRSYLPKVALLILSGGWMGVSGGGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPGSAAGDTDGSAKTAGPAPPVNAATITAFTAQMEKGQSSSTDRGGFLPAFIDISAEKIPQ
Sbjct:   41 MPLLCPCSGENKKEVMRDKVHQGREEIIRTKRRRRGRRRTMLSYTLAINVVLSMVVFGLMLGGSAFVIPRCSIRVRPRIVSAMTMTMAENRARISKQNCAFREHDVGYEERKGKRSITQPARLSSDTSHTPDIAITIVHHLRSYLPKVALLILSGGWMGVSGGGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPGSAAGDTDGSAKTAGPAPPVNAATITAFTAQMEKGQSSSTDRGGFLPAFIDISAEKIPQ 645          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|585106765|gb|EWM25127.1| (violaxanthin de-epoxidase [Nannochloropsis gaditana])

HSP 1 Score: 1262.28 bits (3265), Expect = 0.000e+0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0
Query:    1 MPLLCPCSGENKKEVMRDKVHQGREEIIRTKRRRRGRRRTMLSYTLAINVVLSMVVFGLMLGGSAFVIPRCSIRVRPRIVSAMTMTMAENRARISKQNCAFREHDVGYEERKGKRSITQPARLSSDTSHTPDIAITIVHHLRSYLPKVALLILSGGWMGVSGGGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPGSAAGDTDGSAKTAGPAPPVNAATITAFTAQMEKGQSSSTDRGGFLPAFIDISAEKIPQ 605
            MPLLCPCSGENKKEVMRDKVHQGREEIIRTKRRRRGRRRTMLSYTLAINVVLSMVVFGLMLGGSAFVIPRCSIRVRPRIVSAMTMTMAENRARISKQNCAFREHDVGYEERKGKRSITQPARLSSDTSHTPDIAITIVHHLRSYLPKVALLILSGGWMGVSGGGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPGSAAGDTDGSAKTAGPAPPVNAATITAFTAQMEKGQSSSTDRGGFLPAFIDISAEKIPQ
Sbjct:    1 MPLLCPCSGENKKEVMRDKVHQGREEIIRTKRRRRGRRRTMLSYTLAINVVLSMVVFGLMLGGSAFVIPRCSIRVRPRIVSAMTMTMAENRARISKQNCAFREHDVGYEERKGKRSITQPARLSSDTSHTPDIAITIVHHLRSYLPKVALLILSGGWMGVSGGGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPGSAAGDTDGSAKTAGPAPPVNAATITAFTAQMEKGQSSSTDRGGFLPAFIDISAEKIPQ 605          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|873242008|emb|CEL92120.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 313.153 bits (801), Expect = 9.706e-94
Identity = 162/367 (44.14%), Postives = 217/367 (59.13%), Query Frame = 0
Query:  174 PARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPT--FEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDG-PGAR--RSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKS---WITARA--LWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMV 530
            PA A++EL ++A  GN V VDP CFV++C L T  C  +  C+KGL+CL++C+G+  CST+CF+++G+  LD FL C+VE++ CV+VPRD   ATWT P     D+   P   F++ S+ G WYKV+GM++RYDCFDCQ N FTP           V F +PRPR  G W N V+E+M  +  P  R  RS  + G MFGLTFWENWY+IG+    D G   YKFV+YTGHTLQGNY GAFVY RTP LP  ++P ++QVA    L  + FC I N                R     A   G          +   W T+R+  LW   +  +L   + +E  DWFEDP+ TS WL++QQ R+++ 
Sbjct:  168 PAYADDELRKFADNGNPVAVDPLCFVRRCQLQTKACAADRSCMKGLTCLARCRGDSMCSTSCFSRFGSSTLDAFLTCSVEKEGCVNVPRDLGPATWTSPKE---DQAPGPVDDFDVASMEGTWYKVLGMNSRYDCFDCQKNTFTPAEEPNKPWRVAVEFSLPRPRG-GAWNNRVSEDMFPEATPDMRKQRSYRTKGEMFGLTFWENWYIIGQ---RDEGPDPYKFVYYTGHTLQGNYRGAFVYVRTPTLPQSIVPELTQVAERAKLKLADFCVIDNDKVGRRQDGERERERERGGMRLARTTGKAAKEDIDRDANLRWFTSRSIPLW-NYRFFELTRLLAEEFSDWFEDPSITSQWLVEQQRRVILT 526          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|922852334|gb|KOO21030.1| (violaxanthin de-epoxidase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 247.284 bits (630), Expect = 1.935e-71
Identity = 125/292 (42.81%), Postives = 172/292 (58.90%), Query Frame = 0
Query:  174 PARAENELAQYAKEGNKVG-VDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRAT--WTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGA-----------PNIMLADVSFRMPRPR--APGF-WENHVTEEMLGD-GPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCF 447
            PA AENELAQ A + +    V P CF   C   T  C  + DC+KGL+C +KC G+  C+  CFA+YGN  LD  L C +E   C+ +      A   +  P A     +++P      ++G+WYKV+G +  YDCF+CQ N F+    A           P   + DV + MPR R  AP   ++ H+ E ++ D  PGA R+ H+ G MFGLTFWENWY+IG N P++   P+++FV+YTG TLQ  YEGAFVYAR PELP   MP++ ++AR  G+DP++ C I N+CF
Sbjct:   92 PALAENELAQLASQKSTAELVKPGCFATSCKAETEACGADRDCVKGLACSAKCMGDAQCTMGCFARYGNPTLDRVLQCTIEDAGCIQIATQAPGADSPYDAPKAPKALVKATPAM----MSGKWYKVLGFNPNYDCFECQKNSFSAGAVANTASVSAMTVGPQSAVVDVEYTMPRERVGAPTTTFQAHLVESLVFDSAPGAVRTAHTEGHMFGLTFWENWYLIGTNQPKE---PEFRFVYYTGKTLQNRYEGAFVYARKPELPTASMPSIYKLAREAGMDPTRACCIDNSCF 376          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|551555207|ref|XP_005764800.1| (Violaxanthin deepoxidase [Emiliania huxleyi CCMP1516] >gi|551622679|ref|XP_005791668.1| violaxanthin de-epoxidase [Emiliania huxleyi CCMP1516] >gi|485614589|gb|EOD12371.1| Violaxanthin deepoxidase [Emiliania huxleyi CCMP1516] >gi|485645626|gb|EOD39239.1| violaxanthin de-epoxidase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 245.743 bits (626), Expect = 6.187e-71
Identity = 134/330 (40.61%), Postives = 180/330 (54.55%), Query Frame = 0
Query:  174 PARAENELAQYAKEGNKVG-VDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVG-LDKRSSPTFEI----RSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLA--------DVSFRMPRPRA--PGFWENHVTEEMLGD-GPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFR------------PDSSSFVAASSVRESAGTAHKPGAPP 474
            P  AENELA  A+   K   +DP+CF + C L T  C  N DC+KGL+C +KC G+  C+  CFAK+GN VLDD L C +E Q C+ +           P A G LD    P   +    + + G+WYKVMG ++ YDC+DCQ N F P      + +A        DV + +PR RA  P  +   + E+++ D  PG+ R+ H+ G+MFGLTFWENWYVIG N   D G   ++ V+YTG TLQ  YEGAFVYAR P+LP   MP +  +AR  GL+P+ FC I N C+             P  ++  AA ++         P  PP
Sbjct:   93 PGYAENELADLAQGQFKSELIDPQCFAKSCKLQTKACAENGDCMKGLTCAAKCMGDTQCTVGCFAKFGNPVLDDVLSCTIEDQSCLKI-------AIVAPGADGPLDAPLPPKPLVAVTPQQMAGKWYKVMGWNSNYDCYDCQRNSFRPAARQQAMAIAADGSAVDVDVEYSLPRQRAGMPQDFHAQLHEKLVFDTTPGSHRTAHTEGKMFGLTFWENWYVIGAN---DRGEDAFRIVYYTGKTLQNKYEGAFVYARKPDLPASAMPHIYSIARQAGLEPTSFCAIDNRCYAAPAATAGETPQPPPFTNVAAADTIELDEAPLSAPATPP 412          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|1210518506|dbj|GAX22627.1| (hypothetical protein FisN_17Hh008 [Fistulifera solaris])

HSP 1 Score: 233.417 bits (594), Expect = 1.607e-67
Identity = 122/276 (44.20%), Postives = 168/276 (60.87%), Query Frame = 0
Query:  174 PARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARR--SMHSVGRMFGLTFWENWYVIGE-NSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTC 446
            P+ A +  A+YAKE      D  CFVQKC   T     NP  +KG++CL +CKGE  C+T CFA++G+  L+D+L C +E+ +CV VP++   +     + VG   +   TF+ RSL G WYK  G++  YD FDCQ N F         M   + FR+ RP   GFWEN +TE M+ +   ++   +MH+ G+M+GL+F ENWY++GE +  +DV  P +K V Y GHTLQGNYEGAFVYA+ P LP   +PAV + A   GLD  +F +I NTC
Sbjct:   61 PSVAYDGFAEYAKENQMEKSDVSCFVQKCGDQTKALFQNPRGIKGVTCLGRCKGEQACATQCFAEFGSEALNDWLSCTIEENECVKVPKNVDNSA----ETVGFPYKVE-TFDPRSLVGSWYKTDGLNPNYDLFDCQTNTFERVNDKELGM--GIFFRVRRPEG-GFWENSLTEHMVLEDTKSKDAPTMHTEGKMYGLSFSENWYILGESDGSKDV--PPFKLVAYKGHTLQGNYEGAFVYAKEPILPAAAVPAVREAAAKAGLDFGQFTRIDNTC 326          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|1210532106|dbj|GAX09265.1| (hypothetical protein FisN_17Lh008 [Fistulifera solaris])

HSP 1 Score: 230.72 bits (587), Expect = 2.262e-66
Identity = 120/275 (43.64%), Postives = 165/275 (60.00%), Query Frame = 0
Query:  174 PARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARR--SMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTC 446
            P+ A +  A+YAKE      D  CFVQKC   T     NP  +KG++CL +CKGE  C+T CFA++G+  L+D+L C +E+ +CV VP++   +     + VG   +    F+ RSL G WYK  G++  YD FDCQ N F         M   + FR+ RP   GFWEN +TE M+ +   ++   +MH+ G+M+GL+F ENWY++GE S     +P +K V Y GHTLQGNYEGAFVYA+ P LP   +PAV + A   GLD  +F +I NTC
Sbjct:   61 PSIAYDGFAEYAKENQMDKSDVSCFVQKCGDQTKALFQNPRGIKGVTCLGRCKGEQACATQCFAEFGSEALNDWLSCTIEENECVKVPKNVDNSA----ETVGFPYKVE-AFDPRSLVGSWYKTDGLNPNYDLFDCQTNTFERVNDKEVDM--GIFFRVRRPEG-GFWENSLTEHMVLEDTKSKDAPTMHTEGKMYGLSFSENWYILGE-SDGSKEVPPFKLVAYKGHTLQGNYEGAFVYAKEPILPSAAVPAVREAAAKAGLDFDQFTRIDNTC 326          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|223998935|ref|XP_002289140.1| (violaxanthin de-epoxidase-like 1 [Thalassiosira pseudonana CCMP1335] >gi|220974348|gb|EED92677.1| violaxanthin de-epoxidase-like 1 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 231.491 bits (589), Expect = 4.394e-66
Identity = 119/284 (41.90%), Postives = 163/284 (57.39%), Query Frame = 0
Query:  171 PLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPR--APGFWENHVTEEMLGDGPGAR------RSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTC 446
            P    +  +  A+YAKE      D  CF+ KC   T    +NP  +KG+SCL +CKGE +C+T CFA++G+  LD++L C +E  +CV VP++   +     + VG D  +   F+  +L G+WYK  G++  YD FDCQ N F         +   + FR+PRP     GFWEN +TE M+ D           R+MH+ G+M+GL F ENWY++GE S  D  +P +K V Y GHTLQGNYE AFVYA+   LP E + AV + A   GLD  KF +I NTC
Sbjct:  101 PASTTQKYDGFAEYAKENKMEQSDVGCFINKCGDQTKQLFSNPRGIKGVSCLGRCKGEQSCATRCFAEFGSEDLDNWLSCTIEDYECVKVPKNIDNSA----ENVGYDT-TVKKFDPSTLVGKWYKTDGLNPNYDLFDCQSNTFDFSDDTKKELDMGIFFRVPRPEEYGGGFWENSLTEHMIVDAVSPELDNPTGRTMHTAGKMYGLKFTENWYILGE-SNGDNDIPPFKLVAYKGHTLQGNYEEAFVYAKESVLPKEAVGAVREAAAKAGLDFDKFTRIDNTC 378          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|298709252|emb|CBJ31191.1| (violaxanthin de-epoxidase-like protein of unknown function [Ectocarpus siliculosus])

HSP 1 Score: 225.328 bits (573), Expect = 4.324e-64
Identity = 115/285 (40.35%), Postives = 161/285 (56.49%), Query Frame = 0
Query:  181 LAQYAKEGNKV-GVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRS-RATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFT-------PKPGAPNIMLA----------DVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTC 446
               YA +G ++   D  CF  +C   T  C  +  CLKG++CL +CKGE  C+T CFA+YG+  LD +L C +E   CV +P+D    A   DP  +         FE + L G WYK+MG++ +YDCFDCQ N F        P P   ++  A           V+FR+ +P +  FWEN +TE +  D   + R+ H+ G++FGL+F ENWYV G ++  D G  ++ FV Y GHTLQG+Y+G FVYAR P LP   +  V++VAR +G+DP     I NTC
Sbjct:   33 FEDYAAQGQQMENSDVGCFANECKRETASCFTDGSCLKGVTCLGRCKGEQECATRCFAQYGSNKLDSWLTCTLEDHSCVKIPKDMDFSAIDKDPPHI------VKGFEAKQLQGTWYKIMGVNKKYDCFDCQKNTFNVAQAVDAPVPAGGDVTAATATPRQVADIKVNFRLAKPDSDDFWENTITETLQVDPADSPRTFHTDGKLFGLSFKENWYVTGHST--DPG-EEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVARVAREHGIDPGSMLAIDNTC 308          
BLAST of EWM25127.1 vs. NCBI_GenBank
Match: gi|551657586|ref|XP_005831564.1| (hypothetical protein GUITHDRAFT_109359 [Guillardia theta CCMP2712] >gi|428175696|gb|EKX44584.1| hypothetical protein GUITHDRAFT_109359 [Guillardia theta CCMP2712])

HSP 1 Score: 222.631 bits (566), Expect = 3.089e-63
Identity = 116/276 (42.03%), Postives = 158/276 (57.25%), Query Frame = 0
Query:  191 VGVDPKCFVQK---CSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYK---------------VMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRA----PGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRN 444
            V V+  CF  +   C     +C  N DC KGLSCL++CKGE TCST CFA + +  + +FL CA+E ++C++ P+D     W D  A    K ++  F+I SL G W K               V+G+D RYDCF+CQ N F  + G   +   D +FR+PR R       + +N +TEE+  D   AR SMH+ G+ FGLTFWEN+Y++G+         D++FV Y GHTLQG Y+GAFV +RTPEL    +  V  VA   GLD S FC+I+N
Sbjct:  115 VSVNGPCFADEKTGCGKSFKECAENKDCQKGLSCLARCKGEPTCSTGCFAAFADDSMTNFLGCALEDKECINFPKDPKLLGWLDDGAAAPKKVAN--FDINSLKGDWIKKKWDGRECDGHLLLQVLGLDDRYDCFECQQNRFREENGQWRM---DTTFRLPRARGMSKDSNYLQNDLTEEVFVDSKDARPSMHTTGKTFGLTFWENYYIVGQGK-------DWQFVRYVGHTLQGGYKGAFVLSRTPELSASALEEVKAVATEQGLDLSGFCRIKN 378          
The following BLAST results are available for this feature:
BLAST of EWM25127.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196165|ref|XP_005856280.1|0.000e+0100.00violaxanthin de-epoxidase, partial [Nannochloropsi... [more]
gi|585106765|gb|EWM25127.1|0.000e+0100.00violaxanthin de-epoxidase [Nannochloropsis gaditan... [more]
gi|873242008|emb|CEL92120.1|9.706e-9444.14unnamed protein product [Vitrella brassicaformis C... [more]
gi|922852334|gb|KOO21030.1|1.935e-7142.81violaxanthin de-epoxidase [Chrysochromulina sp. CC... [more]
gi|551555207|ref|XP_005764800.1|6.187e-7140.61Violaxanthin deepoxidase [Emiliania huxleyi CCMP15... [more]
gi|1210518506|dbj|GAX22627.1|1.607e-6744.20hypothetical protein FisN_17Hh008 [Fistulifera sol... [more]
gi|1210532106|dbj|GAX09265.1|2.262e-6643.64hypothetical protein FisN_17Lh008 [Fistulifera sol... [more]
gi|223998935|ref|XP_002289140.1|4.394e-6641.90violaxanthin de-epoxidase-like 1 [Thalassiosira ps... [more]
gi|298709252|emb|CBJ31191.1|4.324e-6440.35violaxanthin de-epoxidase-like protein of unknown ... [more]
gi|551657586|ref|XP_005831564.1|3.089e-6342.03hypothetical protein GUITHDRAFT_109359 [Guillardia... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5558rna5558Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications