EWM25097.1, cds5540 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25097.1 vs. NCBI_GenBank
Match: gi|585106735|gb|EWM25097.1| (hypothetical protein Naga_100016g54 [Nannochloropsis gaditana]) HSP 1 Score: 3136.28 bits (8130), Expect = 0.000e+0 Identity = 1527/1527 (100.00%), Postives = 1527/1527 (100.00%), Query Frame = 0
Query: 1 MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKKAVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALSRLLSVRALPLLRRCSASQYSYFCSLFP 1527
MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKKAVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALSRLLSVRALPLLRRCSASQYSYFCSLFP
Sbjct: 1 MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKKAVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALSRLLSVRALPLLRRCSASQYSYFCSLFP 1527
BLAST of EWM25097.1 vs. NCBI_GenBank
Match: gi|553196200|ref|XP_005856289.1| (ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526] >gi|422292767|gb|EKU20069.1| ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 2261.88 bits (5860), Expect = 0.000e+0 Identity = 1104/1104 (100.00%), Postives = 1104/1104 (100.00%), Query Frame = 0
Query: 388 EWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGG 1491
EWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGG
Sbjct: 1 EWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGG 1104
BLAST of EWM25097.1 vs. NCBI_GenBank
Match: gi|299470743|emb|CBN79789.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.0106 bits (162), Expect = 2.980e-7 Identity = 106/482 (21.99%), Postives = 185/482 (38.38%), Query Frame = 0
Query: 457 LQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSR----------LIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHE-----LVAQYLLP--QSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKK 921
LQ EA + +WL LT + L + L + E S L + ++ YE S++ + + ++ R+ LR +Q + L + A + R +++ L KR + LH+ + A L P Q + + L D L+ER + V K E YN ++++Q Q + L+ V EWE L L +EL + +PQS + AL+ F A+W + + + Q ++ ++ +K RL+ + A +E RK +D R+ + N + + E D K + + SL QQ +Q+E CL +R+ AV + QR R +R A L + + R LCG A +++++ L++ + A W A E++L R+ Q K+
Sbjct: 478 LQEAEAAIVEWLTELTMALHGLT-FQFTLAFIGEDDGEDGSTGSSDLAESTALAEDLWTAYEDSVKRQLDLTLEARREQLR----EQSQPMGLALCFTA--QNRVLASELLGRKRTEMAALHQATIGVMAAPKLRPLLQRAERARQKWSSLLLPEDVYALDDLVERVLRARLQ------------VFKVESFAYN-------------ASSDVIQAEQMADAQLKTVVQEWEAMLDGLKARVECRVSEELNSTVYPQSPALTSALQTWLSTFQADWVGNETTQQLHAHIRQRQVHQLCQTLVAKKQRLKATKDEA----NEFGKQRRK--------RDARAASGNGMFSPSAEQAEDMAKQREFEERCQSLATAISLTQQ---EQIETCLTYRLFAVGQLHQRYRRLRLFFAQLGSRVGARESQATLLCGGEGQAEERIKMVGVCLMLGVVEEACLKWTAVQNERQLVEGMNREDASQDAKR 912 The following BLAST results are available for this feature:
BLAST of EWM25097.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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