EWM25097.1, cds5540 (CDS) Nannochloropsis gaditana

Overview
NameEWM25097.1
Unique Namecds5540
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:272643..277226 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25097.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g54.2906.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:272643..277226 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
BLAST of EWM25097.1 vs. NCBI_GenBank
Match: gi|585106735|gb|EWM25097.1| (hypothetical protein Naga_100016g54 [Nannochloropsis gaditana])

HSP 1 Score: 3136.28 bits (8130), Expect = 0.000e+0
Identity = 1527/1527 (100.00%), Postives = 1527/1527 (100.00%), Query Frame = 0
Query:    1 MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKKAVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALSRLLSVRALPLLRRCSASQYSYFCSLFP 1527
            MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKKAVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALSRLLSVRALPLLRRCSASQYSYFCSLFP
Sbjct:    1 MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKKAVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALSRLLSVRALPLLRRCSASQYSYFCSLFP 1527          
BLAST of EWM25097.1 vs. NCBI_GenBank
Match: gi|553196200|ref|XP_005856289.1| (ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526] >gi|422292767|gb|EKU20069.1| ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 2261.88 bits (5860), Expect = 0.000e+0
Identity = 1104/1104 (100.00%), Postives = 1104/1104 (100.00%), Query Frame = 0
Query:  388 EWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGG 1491
            EWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGG
Sbjct:    1 EWLREKLASLVQHYRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAVNGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRMEGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQSPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRALTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKGQHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAPPSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVRGGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEEDEDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPIDVETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDVEMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLPDVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGG 1104          
BLAST of EWM25097.1 vs. NCBI_GenBank
Match: gi|299470743|emb|CBN79789.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 67.0106 bits (162), Expect = 2.980e-7
Identity = 106/482 (21.99%), Postives = 185/482 (38.38%), Query Frame = 0
Query:  457 LQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSR----------LIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHE-----LVAQYLLP--QSTDESPLAAGQGLANYDGRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKGGKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQEERDKQQQLLKK 921
            LQ  EA + +WL  LT  +  L   +  L  +     E  S           L + ++  YE S++  + + ++ R+  LR      +Q   + L + A  + R +++  L  KR  +  LH+     + A  L P  Q  + +       L   D      L+ER +                 V K E   YN               ++++Q  Q  +  L+  V EWE  L  L         +EL  + +PQS  +  AL+     F A+W  +    +    + Q ++ ++      +K RL+   + A    +E     RK        +D R+ + N + +   E   D  K  +      +     SL QQ   +Q+E CL +R+ AV  + QR R +R   A L + +  R      LCG    A  +++++   L++  +  A   W A   E++L     R+   Q  K+
Sbjct:  478 LQEAEAAIVEWLTELTMALHGLT-FQFTLAFIGEDDGEDGSTGSSDLAESTALAEDLWTAYEDSVKRQLDLTLEARREQLR----EQSQPMGLALCFTA--QNRVLASELLGRKRTEMAALHQATIGVMAAPKLRPLLQRAERARQKWSSLLLPEDVYALDDLVERVLRARLQ------------VFKVESFAYN-------------ASSDVIQAEQMADAQLKTVVQEWEAMLDGLKARVECRVSEELNSTVYPQSPALTSALQTWLSTFQADWVGNETTQQLHAHIRQRQVHQLCQTLVAKKQRLKATKDEA----NEFGKQRRK--------RDARAASGNGMFSPSAEQAEDMAKQREFEERCQSLATAISLTQQ---EQIETCLTYRLFAVGQLHQRYRRLRLFFAQLGSRVGARESQATLLCGGEGQAEERIKMVGVCLMLGVVEEACLKWTAVQNERQLVEGMNREDASQDAKR 912          
The following BLAST results are available for this feature:
BLAST of EWM25097.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585106735|gb|EWM25097.1|0.000e+0100.00hypothetical protein Naga_100016g54 [Nannochlorops... [more]
gi|553196200|ref|XP_005856289.1|0.000e+0100.00ubiquitin specific peptidase 54, partial [Nannochl... [more]
gi|299470743|emb|CBN79789.1|2.980e-721.99conserved unknown protein [Ectocarpus siliculosus][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5554rna5554Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications