EWM25158.1, cds5537 (CDS) Nannochloropsis gaditana

Overview
NameEWM25158.1
Unique Namecds5537
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:266605..266682 -
Alignment locationCM002466.1:266095..266371 -
Alignment locationCM002466.1:265243..265992 -
Alignment locationCM002466.1:264071..264855 -

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Properties
Property NameValue
Protein idEWM25158.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g58.2967.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:266605..266682 -
CM002466.1supercontigCM002466.1:266095..266371 -
CM002466.1supercontigCM002466.1:265243..265992 -
CM002466.1supercontigCM002466.1:264071..264855 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25158.1 vs. NCBI_GenBank
Match: gi|585106796|gb|EWM25158.1| (hypothetical protein Naga_100016g58 [Nannochloropsis gaditana])

HSP 1 Score: 1269.22 bits (3283), Expect = 0.000e+0
Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0 
Query:    1 MALRRRNGVRQTSEELSSEIFTERVLTVYSQQAQRIQESFNLAMESNNKAFDNALKTIIAVLGRNHPSQCVEAVDESSGRQHVGPSLESGDSGTRRNRPAARLSRTSRRVRASPFHIKDNAEPMGVRGIFVNDNMEVEEQQGGPYASSARRRSSYPTRLRTRMAPLRGAGGEAEDKALKSADAAQLEGSDVGIRGLSPVRVTRRGSTLGRPPQRSADGRQHAEAVLPVSKKRSRLGHHSVPSRDTEAGLGEYEELGDVSGVDGEKGHPTKGEGSSPALPAPSRWEVTAAVQAFLRGFERYLSLEHVSSHTGQPLAPLTVSNRVSQAHRLLFRAGLEEPTEEGLERLRVDVGPDRNAYNLAGDMLGFLQHMLRALGCQVSDLGGAEELRRYVLTHKREMEALVPPNRVPYPRERAAWKKVWEWASGKRIWEGEAGHHRLGLGASSSSAGSFRQQARALVSDKAESMETHSFEGEANRGLGGGQEEGDVSDEEAGMGEGEEEAEEEDKVLKDVIKWMGENNTKKRRKESEGILDKRVEDAVEETGGTGAVEEEKRGENEETREENQGLRRRTDAPKQARTNALCFDDSNGLIRRDGEGEGVKASDWGIPRHRLLREERDSSKDCLDARASL 629
            MALRRRNGVRQTSEELSSEIFTERVLTVYSQQAQRIQESFNLAMESNNKAFDNALKTIIAVLGRNHPSQCVEAVDESSGRQHVGPSLESGDSGTRRNRPAARLSRTSRRVRASPFHIKDNAEPMGVRGIFVNDNMEVEEQQGGPYASSARRRSSYPTRLRTRMAPLRGAGGEAEDKALKSADAAQLEGSDVGIRGLSPVRVTRRGSTLGRPPQRSADGRQHAEAVLPVSKKRSRLGHHSVPSRDTEAGLGEYEELGDVSGVDGEKGHPTKGEGSSPALPAPSRWEVTAAVQAFLRGFERYLSLEHVSSHTGQPLAPLTVSNRVSQAHRLLFRAGLEEPTEEGLERLRVDVGPDRNAYNLAGDMLGFLQHMLRALGCQVSDLGGAEELRRYVLTHKREMEALVPPNRVPYPRERAAWKKVWEWASGKRIWEGEAGHHRLGLGASSSSAGSFRQQARALVSDKAESMETHSFEGEANRGLGGGQEEGDVSDEEAGMGEGEEEAEEEDKVLKDVIKWMGENNTKKRRKESEGILDKRVEDAVEETGGTGAVEEEKRGENEETREENQGLRRRTDAPKQARTNALCFDDSNGLIRRDGEGEGVKASDWGIPRHRLLREERDSSKDCLDARASL
Sbjct:    1 MALRRRNGVRQTSEELSSEIFTERVLTVYSQQAQRIQESFNLAMESNNKAFDNALKTIIAVLGRNHPSQCVEAVDESSGRQHVGPSLESGDSGTRRNRPAARLSRTSRRVRASPFHIKDNAEPMGVRGIFVNDNMEVEEQQGGPYASSARRRSSYPTRLRTRMAPLRGAGGEAEDKALKSADAAQLEGSDVGIRGLSPVRVTRRGSTLGRPPQRSADGRQHAEAVLPVSKKRSRLGHHSVPSRDTEAGLGEYEELGDVSGVDGEKGHPTKGEGSSPALPAPSRWEVTAAVQAFLRGFERYLSLEHVSSHTGQPLAPLTVSNRVSQAHRLLFRAGLEEPTEEGLERLRVDVGPDRNAYNLAGDMLGFLQHMLRALGCQVSDLGGAEELRRYVLTHKREMEALVPPNRVPYPRERAAWKKVWEWASGKRIWEGEAGHHRLGLGASSSSAGSFRQQARALVSDKAESMETHSFEGEANRGLGGGQEEGDVSDEEAGMGEGEEEAEEEDKVLKDVIKWMGENNTKKRRKESEGILDKRVEDAVEETGGTGAVEEEKRGENEETREENQGLRRRTDAPKQARTNALCFDDSNGLIRRDGEGEGVKASDWGIPRHRLLREERDSSKDCLDARASL 629
The following BLAST results are available for this feature:
BLAST of EWM25158.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106796|gb|EWM25158.1|0.000e+0100.00hypothetical protein Naga_100016g58 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5551rna5551Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications