EWM25087.1, cds5530 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|585106725|gb|EWM25087.1| (transmembrane protein 14 [Nannochloropsis gaditana]) HSP 1 Score: 207.608 bits (527), Expect = 9.059e-68 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
Query: 1 MGGSAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEWL 106
MGGSAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEWL
Sbjct: 1 MGGSAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEWL 106
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|1069936536|ref|XP_018298401.1| (hypothetical protein PHYBLDRAFT_55743 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026596011|gb|OAD80361.1| hypothetical protein PHYBLDRAFT_55743 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 87.8113 bits (216), Expect = 1.744e-20 Identity = 46/104 (44.23%), Postives = 71/104 (68.27%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQ--KVVPTAIALQGLVSGVYQGRKVWEW 105
S+H ++ + + GG+AG+ RT+S PSL AGVG+GSL V+G +I+ D+ GH A++AS L+ GG +PRAIKTQ K VP A+++ + +G Y +KV ++
Sbjct: 2 SSHTAFTMAALSATGGIAGFARTRSFPSLIAGVGIGSLYGVAGYLIKENKDY-GHETAVVASTLLAGGMIPRAIKTQFKKPVPVALSVISIAAGAYYVKKVIDY 104
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|727140681|emb|CEG76851.1| (Putative UPF0136 domain protein [Rhizopus microsporus] >gi|727147238|emb|CEG70328.1| Putative UPF0136 domain protein [Rhizopus microsporus] >gi|729698118|emb|CEJ04563.1| Putative UPF0136 domain protein [Rhizopus microsporus] >gi|729713080|emb|CEI90588.1| Putative UPF0136 domain protein [Rhizopus microsporus] >gi|1178056247|gb|ORE11617.1| TMEM14-domain-containing protein [Rhizopus microsporus var. microsporus] >gi|1178067740|gb|ORE22139.1| TMEM14-domain-containing protein [Rhizopus microsporus]) HSP 1 Score: 86.6557 bits (213), Expect = 4.655e-20 Identity = 47/102 (46.08%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H SY + + AGG+AG+VRT+S PSL AG+G+G+L +G +IQ D+ GH A+ AS ++ G +PRAIKT+K VP A+++ L +G Y +KV E+
Sbjct: 2 SHHPSYTMAGLCAAGGIAGFVRTRSVPSLAAGLGVGALYGAAGYLIQQNRDY-GHETAVAASVILGGAMIPRAIKTRKPVPVALSVISLAAGTYYVKKVIEY 102
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|1043305613|gb|OBZ90268.1| (hypothetical protein A0J61_01677 [Choanephora cucurbitarum]) HSP 1 Score: 84.7297 bits (208), Expect = 2.878e-19 Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H SY + + AGG+AG+ RT+S PSL AG+G+G+L +G ++Q D+ GH A+ AS ++ G +PRA+KT+K VP A++L L +G Y +KV E+
Sbjct: 2 SHHPSYTMAGLCAAGGIAGFARTRSVPSLVAGLGVGALYGTAGYLMQENKDY-GHETAVAASVILGGAMIPRAVKTRKPVPIALSLISLAAGSYYVKKVIEY 102
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|1183499798|gb|ORZ23440.1| (transmembrane proteins 14C-domain-containing protein [Absidia repens]) HSP 1 Score: 83.9593 bits (206), Expect = 6.415e-19 Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H +YA+ + AGG+ G+ RT+S PSL AGVGLG+L +G + Q ++ G+ LA+ +S ++ G +PRAIKT+K VP A+AL L +G Y +KV ++
Sbjct: 2 SHHPAYAMSALCFAGGIGGFARTRSLPSLIAGVGLGTLYGAAGYISQ--ENVNGYKLAVGSSVVLAGAMIPRAIKTKKPVPIALALTSLAAGAYYTKKVIDY 101
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|1021061181|emb|SAM02906.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 82.8037 bits (203), Expect = 1.526e-18 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H +Y++ + GG+AG+ RT+S PSL+AG+G+G L V+G +I + GH LA+ S L+ G LPRAIKT+K +P A+A+ L +G Y +KV ++
Sbjct: 2 SHHTAYSMSALCVTGGIAGFARTKSLPSLFAGIGIGGLYGVAGYLIGENAN-GGHELAVGTSVLLTGAMLPRAIKTRKPLPIALAVTSLAAGAYYTKKVIDY 102
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|384499465|gb|EIE89956.1| (hypothetical protein RO3G_14667 [Rhizopus delemar RA 99-880]) HSP 1 Score: 82.0333 bits (201), Expect = 3.532e-18 Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H SY + + AGG+ G+ RT+S PSL AG+G+G+L +G +IQ D+ GH A+ AS ++ G +PRAIKT+K +P A+++ L +G Y +K+ E+
Sbjct: 2 SHHPSYTMAGLCVAGGVIGFARTRSVPSLVAGLGVGALYGAAGRLIQQNKDY-GHETAVAASAILGGAMIPRAIKTKKPLPIALSVISLTAGSYYVKKIIEY 102
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|511008060|gb|EPB89332.1| (hypothetical protein HMPREF1544_03841 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 80.4925 bits (197), Expect = 1.292e-17 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H SY + + GG+AG+ +T+S PSL AG+G+G+L +G +IQ D+ GH A+ AS L+ G +PRA+KT+K VP A+++ L +G Y +KV E+
Sbjct: 2 SQHPSYTMAGLCAVGGVAGFAKTRSVPSLVAGLGVGALYGAAGYLIQQNRDY-GHETAVAASTLLGGAMIPRALKTRKPVPIALSVISLAAGGYYVKKVIEY 102
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|758362776|emb|CEP14760.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 80.1073 bits (196), Expect = 1.678e-17 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 4 SAHASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEW 105
S H SY + + GG+AG+ +T+S PSL AG+G+G+L +G +IQ D+ GH A+ AS L+ G +PRA+KT+K VP A+++ L +G Y +KV E+
Sbjct: 2 SHHPSYTLAGLCAVGGVAGFAKTRSVPSLVAGLGVGALYGAAGYLIQQNRDY-GHETAVAASTLLGGAMIPRALKTRKPVPIALSVISLAAGGYYVKKVIEY 102
BLAST of EWM25087.1 vs. NCBI_GenBank
Match: gi|301117838|ref|XP_002906647.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107996|gb|EEY66048.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 79.7221 bits (195), Expect = 2.559e-17 Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = 0
Query: 6 HASYAVGTILCAGGLAGYVRTQSKPSLYAGVGLGSLMVVSGMVIQSGDDFRGHTLALIASGLVVGGTLPRAIKTQKVVPTAIALQGLVSGVYQGRKVWEWL 106
HA+Y + +L AGG+ GY++T+S PSL AGV LG+ V+G ++Q G+ GH + L+ S + +G RA++T+K +P +IA G +S Y + EWL
Sbjct: 4 HATYTMAGVLTAGGVFGYLKTKSVPSLVAGVTLGAGFGVAGYLLQKGEMTNGHGMGLLMSSITMGAMGVRAVRTKKPLPVSIASLGALSAAYHAHRFTEWL 104 The following BLAST results are available for this feature:
BLAST of EWM25087.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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