EWM25096.1, cds5528 (CDS) Nannochloropsis gaditana

Overview
NameEWM25096.1
Unique Namecds5528
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:245801..245895 +
Alignment locationCM002466.1:246260..246917 +
Alignment locationCM002466.1:247126..247269 +
Alignment locationCM002466.1:247450..247926 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25096.1
Producteukaryotic peptide chain release factor subunit 1
Orig transcript idgnl|cribi|Naga_100016g67.2905.mrna
GeneeRF1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:245801..245895 +
CM002466.1supercontigCM002466.1:246260..246917 +
CM002466.1supercontigCM002466.1:247126..247269 +
CM002466.1supercontigCM002466.1:247450..247926 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0016149translation release factor activity, codon specific
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006415translational termination
Vocabulary: INTERPRO
TermDefinition
IPR005142eRF1_3
IPR005141eRF1_2
IPR005140eRF1_1_Pelota
IPR029064L30e-like
IPR024049Release_factor_eRF1/aRF1_N
IPR004403Peptide_chain-rel_eRF1/aRF1
Homology
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|585106734|gb|EWM25096.1| (eukaryotic peptide chain release factor subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 946.036 bits (2444), Expect = 0.000e+0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query:    1 MASAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYADMGEDSDEEGGATEEDYEDPF 457
            MASAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYADMGEDSDEEGGATEEDYEDPF
Sbjct:    1 MASAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYADMGEDSDEEGGATEEDYEDPF 457          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|298705462|emb|CBJ28737.1| (eukaryotic peptide chain release factor 1 [Ectocarpus siliculosus])

HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0
Identity = 332/428 (77.57%), Postives = 376/428 (87.85%), Query Frame = 0
Query:   11 GNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYADM 438
            G+R V+ WKVKKLIKSLQ+A+GNGTSMISL+IPP DQI+RV KMLADEYGTATNIKSR N+LSVL AITSTQQRLKLYS+VPPNGLV+YCGTI+TDEGKE+R+ +DFEPFK INTSLYLCDNKFHTEAL ELL+DD++FGFI+MDGNG+LYGTLQG+TR VLHKFSVDLPKKHGRGGQSA+RFARLR+E RHNYVRKVAE A  +FITDNK N  GLV+AGSA+FK ELQ SDLFDPRLLK V+K VDVSYGGE GFNQAIEL+AETLGSVKLVQEK+LLQKYFDEI+QDTGKYCFMVDDTLKGL+LGAVETLIVW+ L+  R  VR+N+TGEE+VLH+  EQ  N     +TH  D +TG ELEV DK SLVEW A+NY  FG  LEF+TNRSQEG+QFCKGFGG+GG+LRW+VDFAE  E  Y D+
Sbjct:   12 GDRQVEIWKVKKLIKSLQKARGNGTSMISLVIPPGDQIARVGKMLADEYGTATNIKSRVNKLSVLSAITSTQQRLKLYSRVPPNGLVIYCGTIVTDEGKEKRMNLDFEPFKAINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQGSTRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCAGLVLAGSAEFKNELQGSDLFDPRLLKNVIKMVDVSYGGEAGFNQAIELSAETLGSVKLVQEKRLLQKYFDEINQDTGKYCFMVDDTLKGLDLGAVETLIVWDNLDINRLEVRNNSTGEEKVLHLTPEQENN-----DTHFHDTETGVELEVTDKQSLVEWIANNYKNFGAALEFITNRSQEGSQFCKGFGGIGGILRWRVDFAEMDESNYEDV 434          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|676395013|ref|XP_009040784.1| (hypothetical protein AURANDRAFT_32373 [Aureococcus anophagefferens] >gi|323448635|gb|EGB04531.1| hypothetical protein AURANDRAFT_32373 [Aureococcus anophagefferens])

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 331/429 (77.16%), Postives = 375/429 (87.41%), Query Frame = 0
Query:   12 NRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF--AEHSEETYADM 438
            ++ V+ WKVKKL+KSL  A+GNGTSMISL+IPPRDQISRV KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLYS+VP NGLV+YCGTIMTDEGKERR+ IDFEPFKPINTSLYLCDNKFHTEAL ELLEDDDKFGFIIMDGNGSLYGTLQGN R VLHKFSVDLPKKHGRGGQSA+RFARLRME RHNYVRKVAELAV  FI+ +K NV GLV+AGSADFK+EL  SD+FD RL +VV+KTVDVSYGGE GFNQAIEL+AETLGSVKLVQEK+LLQKYFDEISQDTGKYCFMV+DTLK LELGAVETL+VWE L+  R  +R++  GE++VLH+ KEQ A+       +  DA +G ELEV +K+SLVE+ A+NY  FGT LEFVTNRSQEG+QFC+GFGG+GG+LRW+VDF   E +EE+ A+M
Sbjct:   14 DKQVEIWKVKKLVKSLTLARGNGTSMISLVIPPRDQISRVAKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYSRVPLNGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDDKFGFIIMDGNGSLYGTLQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQMFISADKPNVAGLVLAGSADFKSELHTSDMFDQRLARVVIKTVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQKYFDEISQDTGKYCFMVEDTLKALELGAVETLVVWENLDIDRLTLRNHAAGEDKVLHLSKEQQAH-----EEYFHDAASGVELEVTEKVSLVEFLANNYKSFGTTLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFLEMEMAEESAAEM 437          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|552935918|gb|ESA19233.1| (hypothetical protein GLOINDRAFT_136813 [Rhizophagus irregularis DAOM 181602] >gi|595492637|gb|EXX75906.1| hypothetical protein RirG_037880 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 656.366 bits (1692), Expect = 0.000e+0
Identity = 313/416 (75.24%), Postives = 361/416 (86.78%), Query Frame = 0
Query:   12 NRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            +R V+ WKVKKLIKSL+ A+GNGTSMISLIIPP+DQISR+ KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLY+KVP NGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL ELLE D+KFGFI+MDGNG+L+GTL GNTR V+HKF+V+LPKKHGRGGQSA+RFARLR E RHNYVRKVAELAV ++IT++K NV GL++AGSADFKTEL  SD+FD RL   V+K VDVSYGGENGFNQAIELAAE+L +VK +QEKKL+QKYFDEISQDTGKYCF VDDTLKGLELGAVETLIVWE L+T RYV++ N+ G E V+H+ KEQ       D     D +TG E+EVVD+  L+EWFAD+Y  FG  LEFVTNRSQEG+QF KGFGG+GGLLR+KVDF
Sbjct:   12 DRNVEIWKVKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEYGTASNIKSRVNRLSVLAAITSTQQRLKLYTKVPTNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSELLESDNKFGFIVMDGNGALFGTLSGNTREVIHKFAVELPKKHGRGGQSALRFARLREEKRHNYVRKVAELAVQFYITNDKVNVTGLILAGSADFKTELSQSDMFDNRLQTKVIKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIQKYFDEISQDTGKYCFGVDDTLKGLELGAVETLIVWENLDTTRYVLK-NSAGSEVVVHMTKEQ-----EKDRALYTDKETGSEMEVVDRTPLLEWFADHYKDFGANLEFVTNRSQEGSQFVKGFGGIGGLLRYKVDF 421          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|675856942|ref|XP_009014031.1| (hypothetical protein HELRODRAFT_75596 [Helobdella robusta] >gi|555705009|gb|ESO08242.1| hypothetical protein HELRODRAFT_75596 [Helobdella robusta])

HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0
Identity = 310/443 (69.98%), Postives = 366/443 (82.62%), Query Frame = 0
Query:    1 MASAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYADMGEDSD 443
            M++A +     +R V+ WK+KKLIKSL+ A+GNGTSMISLIIPP+DQISRV KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLY+KVPPNGLV YCGTI+TDEGKE+++ IDFEPF+PINTSLYLCDNKFHTEAL  LL DD KFGFI+MDGN +L+GTL GNTR VLHKFSVDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+AV  FI +++ N+ GLVMAGSADFKTEL  SD+FD RL   ++K VDVSYGGENGFNQAIELAAE LG+VK +QEKKL+ +YFDEISQD+GKYCF V DTLK LE+GAVE LIVWE L+ +RYV+++N T EE+VLH+  EQ       D T+  DA+TG ELE+VD +SL+EWFA+NY  FG  LE +T++SQEG QF KGFGG+GG+LR++VDF     E   D+G D D
Sbjct:    1 MSAAAEGETSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVTKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYTKVPPNGLVSYCGTIVTDEGKEKKVNIDFEPFRPINTSLYLCDNKFHTEALTALLADDSKFGFIVMDGNCALFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQLFIVNDRPNIAGLVMAGSADFKTELSQSDMFDQRLQAKIIKIVDVSYGGENGFNQAIELAAEALGNVKFIQEKKLIGRYFDEISQDSGKYCFGVADTLKALEMGAVEILIVWENLDIIRYVLKNNATNEEKVLHLKPEQ-----EKDKTYFTDAETGVELELVDSVSLLEWFANNYKGFGATLEIITDKSQEGAQFVKGFGGIGGILRYQVDF--QGLEALDDLGVDFD 436          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|675375284|gb|KFM68186.1| (Eukaryotic peptide chain release factor subunit 1, partial [Stegodyphus mimosarum])

HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0
Identity = 304/429 (70.86%), Postives = 364/429 (84.85%), Query Frame = 0
Query:    1 MASAGQ--QSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            M+S G   + +  +R V+ WK+KKLIKSL+ A+GNGTSMISLIIPP+DQISRV+KMLADE+GTA+NIKSR NRLSVL AITS Q RLKLY+KVPPNGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTLQGNTR VLHKF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+A   FIT++K N+ GL++AGSADFKTEL  SD+FDPRL   VLK VDVSYGGENGFNQAIEL+AE L +VK +QEKKL+ +YFDEISQDTGKYCF V+DTLK LE+G+VE LI WE L+ +RYV++++TT EE+VLH+  EQ       D TH  D +TG ELE+VD + L+EW A+NY  FG  LE +T+RSQEG+QF KGFGG+GG+LR++VDF
Sbjct:    1 MSSTGYNLEESSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQAKVLKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGSVEILIAWENLDIVRYVLKNHTTDEEKVLHLTPEQ-----EKDKTHFTDRETGVELELVDSVPLLEWLANNYKSFGATLEIITDRSQEGSQFVKGFGGIGGILRYRVDF 424          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|926618486|ref|XP_013774450.1| (PREDICTED: eukaryotic peptide chain release factor subunit 1 [Limulus polyphemus])

HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0
Identity = 304/421 (72.21%), Postives = 360/421 (85.51%), Query Frame = 0
Query:    7 QSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            + +  +R V+ WKVKKLIKSL+ A+GNGTSMISLIIPP+DQISRV+KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLY+KVPPNGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTLQGNTR VLHKF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+A   FIT++K N+ GL++AGSADFKTEL  SD+FDPRL   VLK VDVSYGGENGFNQAIEL+AE L +VK +QEKKL+ +YFDEISQDTGKYCF V+DTLK LE+G+VE LI WE LE  R+V++++ + EE+VLH+  EQ       D TH  D +TG ELE+VD I L+EW A+NY  FGT LE +T+RSQEG+QF KGFGG+GGLLR++VDF
Sbjct:    6 EDSSADRNVEVWKVKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSALLADDNKFGFIVMDGNGALFGTLQGNTRDVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQAKVLKLVDVSYGGENGFNQAIELSAEVLANVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGSVEILICWENLEINRFVLKNHASEEEKVLHLTPEQ-----EKDKTHFVDKETGVELELVDSIPLLEWLANNYKSFGTTLEIITDRSQEGSQFVKGFGGIGGLLRYRVDF 421          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|15213995|sp|Q9GR88.1|ERF1_POLMI (RecName: Full=Eukaryotic peptide chain release factor subunit 1; Short=Eukaryotic release factor 1; Short=eRF1 >gi|11995043|dbj|BAB20047.1| putative eukaryotic petide chain release factor subunit 1 [Polyandrocarpa misakiensis])

HSP 1 Score: 650.973 bits (1678), Expect = 0.000e+0
Identity = 305/417 (73.14%), Postives = 360/417 (86.33%), Query Frame = 0
Query:   11 GNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
             +R V+ WK+KKLIKSL+ A+GNGTSMISLIIPP+DQ+SRV KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLY+KVPPNGLV+YCGTI+TDEGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTLQGNTR VLHKF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE AV  FIT+++ NV GLV+AGSADFKTEL  SD+FD RL   +LK VDVSYGGENGFNQAIEL+AE L +VK +QEKKL+ +YFDEISQDTGKYCF VDDTLK LE+GAVE LIVWE L+TMRYV++++TT EE++L +  +Q       D TH  D  TG E+E+V+  SL+EWFA+NY KFG+ LE VT+RSQEG+QF KGFGG+GG+LR+++DF
Sbjct:    8 ADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFITNDRPNVTGLVLAGSADFKTELSQSDMFDQRLQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLKALEMGAVEILIVWENLDTMRYVLKNHTTDEEKILFLKPDQ-----EKDKTHFTDKDTGVEMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDF 419          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|1009532699|ref|XP_015903448.1| (eukaryotic peptide chain release factor subunit 1 [Parasteatoda tepidariorum])

HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0
Identity = 304/429 (70.86%), Postives = 362/429 (84.38%), Query Frame = 0
Query:    1 MASAGQ--QSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            M+S G   + +  +R V+ WK+KKLIKSL+ A+GNGTSMISLIIPP+DQISRV+KMLADE+GTA+NIKSR NRLSVL AITS Q RLKLY+KVPPNGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTLQGNTR VLHKF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+A   FIT++K N+ GL++AGSADFKTEL  SD+FDPRL   VLK VDVSYGGENGFNQAIEL+AE L +VK +QEKKL+ +YFDEISQDTGKYCF VDDTLK LE+G+VE LI WE L+ +RYV++++ T EE+VLH+  EQ       D TH  D  TG ELE+VD + L+EW A+NY  FG  LE +T+RSQEG+QF KGFGG+GG+LR++VDF
Sbjct:    1 MSSTGYTVEESSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQVKVLKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLKALEMGSVEILIAWENLDIVRYVLKNHATDEEKVLHLTPEQ-----EKDKTHFTDRDTGVELELVDSVPLLEWLANNYKSFGATLEIITDRSQEGSQFVKGFGGIGGILRYRVDF 424          
BLAST of EWM25096.1 vs. NCBI_GenBank
Match: gi|1126166633|ref|XP_019615145.1| (PREDICTED: eukaryotic peptide chain release factor subunit 1 [Branchiostoma belcheri])

HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0
Identity = 306/424 (72.17%), Postives = 361/424 (85.14%), Query Frame = 0
Query:    4 AGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            +G  S   +R V+ WK+KKLIKSL+ A+GNGTSMISLIIPP+DQISRV+KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLYSKVPPNGLV+YCGTI+TDEGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTL GNTR VLHKF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+A   FIT++K N+ GL++AGSADFKTEL  SD+FD RL   VLK VDVSYGGENGFNQAIEL+AE L +VK +QEKKL+ KYFDEISQDTGKYCF VDDTLK LE+GAVETLIVWE L+  RYV++D+   EE++L++  EQ       D T+  D  TG ELE+++ + L+EWFA+NY KFG  LE +T+RSQEG+QFCKGFGG+GG+LR++VDF
Sbjct:    2 SGDSSDQADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLAAITSVQQRLKLYSKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSALLTDDNKFGFIVMDGNGALFGTLCGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNITGLILAGSADFKTELSQSDMFDQRLQVKVLKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTGKYCFGVDDTLKALEMGAVETLIVWENLDYTRYVLKDHQKDEEKLLYLRPEQ-----EKDKTYFTDKDTGVELELMESMPLLEWFANNYKKFGATLEIITDRSQEGSQFCKGFGGIGGILRYRVDF 420          
The following BLAST results are available for this feature:
BLAST of EWM25096.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106734|gb|EWM25096.1|0.000e+0100.00eukaryotic peptide chain release factor subunit 1 ... [more]
gi|298705462|emb|CBJ28737.1|0.000e+077.57eukaryotic peptide chain release factor 1 [Ectocar... [more]
gi|676395013|ref|XP_009040784.1|0.000e+077.16hypothetical protein AURANDRAFT_32373 [Aureococcus... [more]
gi|552935918|gb|ESA19233.1|0.000e+075.24hypothetical protein GLOINDRAFT_136813 [Rhizophagu... [more]
gi|675856942|ref|XP_009014031.1|0.000e+069.98hypothetical protein HELRODRAFT_75596 [Helobdella ... [more]
gi|675375284|gb|KFM68186.1|0.000e+070.86Eukaryotic peptide chain release factor subunit 1,... [more]
gi|926618486|ref|XP_013774450.1|0.000e+072.21PREDICTED: eukaryotic peptide chain release factor... [more]
gi|15213995|sp|Q9GR88.1|ERF1_POLMI0.000e+073.14RecName: Full=Eukaryotic peptide chain release fac... [more]
gi|1009532699|ref|XP_015903448.1|0.000e+070.86eukaryotic peptide chain release factor subunit 1 ... [more]
gi|1126166633|ref|XP_019615145.1|0.000e+072.17PREDICTED: eukaryotic peptide chain release factor... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5542rna5542Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications