EWM25113.1, cds5519 (CDS) Nannochloropsis gaditana

Overview
NameEWM25113.1
Unique Namecds5519
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:226977..226979 -
Alignment locationCM002466.1:226507..226591 -
Alignment locationCM002466.1:226197..226436 -
Alignment locationCM002466.1:225941..226150 -
Alignment locationCM002466.1:225648..225856 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25113.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g76.2922.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:226977..226979 -
CM002466.1supercontigCM002466.1:226507..226591 -
CM002466.1supercontigCM002466.1:226197..226436 -
CM002466.1supercontigCM002466.1:225941..226150 -
CM002466.1supercontigCM002466.1:225648..225856 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25113.1 vs. NCBI_GenBank
Match: gi|585106751|gb|EWM25113.1| (hypothetical protein Naga_100016g76 [Nannochloropsis gaditana])

HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0 
Query:    1 MLYSSLHHPSEIHCCSHTKSRLTLILFNHGSKGYTQNLHHCYSAICSCVLQDKTFATSQNSAEYQENSPSEGPCRRQRLTNASGLNRFGNYIWMRWAMNMDLVPFYTFESLFTTPSQTLQVYMVRVEATLDKVKGTSRLPEQSGDFKAKDINYGVYTKLIKIQELFTFARDDNSVHIGTPVFGHKIFTDVPLVLVCKIFHQAERGKCGKKGCRLRNDIESLLSRFVFPSFIPNIRRVTRQNSLLSLKK 248
            MLYSSLHHPSEIHCCSHTKSRLTLILFNHGSKGYTQNLHHCYSAICSCVLQDKTFATSQNSAEYQENSPSEGPCRRQRLTNASGLNRFGNYIWMRWAMNMDLVPFYTFESLFTTPSQTLQVYMVRVEATLDKVKGTSRLPEQSGDFKAKDINYGVYTKLIKIQELFTFARDDNSVHIGTPVFGHKIFTDVPLVLVCKIFHQAERGKCGKKGCRLRNDIESLLSRFVFPSFIPNIRRVTRQNSLLSLKK
Sbjct:    1 MLYSSLHHPSEIHCCSHTKSRLTLILFNHGSKGYTQNLHHCYSAICSCVLQDKTFATSQNSAEYQENSPSEGPCRRQRLTNASGLNRFGNYIWMRWAMNMDLVPFYTFESLFTTPSQTLQVYMVRVEATLDKVKGTSRLPEQSGDFKAKDINYGVYTKLIKIQELFTFARDDNSVHIGTPVFGHKIFTDVPLVLVCKIFHQAERGKCGKKGCRLRNDIESLLSRFVFPSFIPNIRRVTRQNSLLSLKK 248
The following BLAST results are available for this feature:
BLAST of EWM25113.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106751|gb|EWM25113.1|0.000e+0100.00hypothetical protein Naga_100016g76 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5533rna5533Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications