EWM25186.1, cds5487 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25186.1 vs. NCBI_GenBank
Match: gi|585106848|gb|EWM25186.1| (hypothetical protein Naga_100146g7 [Nannochloropsis gaditana]) HSP 1 Score: 1010.36 bits (2611), Expect = 0.000e+0 Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0 Query: 1 MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLAEDAAIQKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTSTTRGTSLPASPPLPASLSPPLSDITGVSSSFRPPHSQFSSSFLTRASGKRQMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHPSFPSFATVAGTRGAVDRNNYLGNGMGGYYSHGYPGSTQPNRPYSTPLRDMSLGTTDRVSYVPPNDIFLDPVFPRCPPSAHFSTLQHPCYMGKPVTPPFVPSMGAPPSHPPLHSSWAPALQPGGKFVPVGAPMTISEWLGKGMDGWRQR 493 MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLAEDAAIQKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTSTTRGTSLPASPPLPASLSPPLSDITGVSSSFRPPHSQFSSSFLTRASGKRQMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHPSFPSFATVAGTRGAVDRNNYLGNGMGGYYSHGYPGSTQPNRPYSTPLRDMSLGTTDRVSYVPPNDIFLDPVFPRCPPSAHFSTLQHPCYMGKPVTPPFVPSMGAPPSHPPLHSSWAPALQPGGKFVPVGAPMTISEWLGKGMDGWRQR Sbjct: 1 MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLAEDAAIQKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTSTTRGTSLPASPPLPASLSPPLSDITGVSSSFRPPHSQFSSSFLTRASGKRQMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHPSFPSFATVAGTRGAVDRNNYLGNGMGGYYSHGYPGSTQPNRPYSTPLRDMSLGTTDRVSYVPPNDIFLDPVFPRCPPSAHFSTLQHPCYMGKPVTPPFVPSMGAPPSHPPLHSSWAPALQPGGKFVPVGAPMTISEWLGKGMDGWRQR 493
BLAST of EWM25186.1 vs. NCBI_GenBank
Match: gi|553184335|ref|XP_005854071.1| (hypothetical protein NGA_0504600 [Nannochloropsis gaditana CCMP526] >gi|422294989|gb|EKU22288.1| hypothetical protein NGA_0504600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 320.087 bits (819), Expect = 7.621e-105 Identity = 160/168 (95.24%), Postives = 162/168 (96.43%), Query Frame = 0 Query: 1 MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVKCDKVQPRCT 168 MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKV+ + CT Sbjct: 1 MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVRDARQSGGCT 168
BLAST of EWM25186.1 vs. NCBI_GenBank
Match: gi|585106850|gb|EWM25188.1| (c6 finger domain protein [Nannochloropsis gaditana]) HSP 1 Score: 116.316 bits (290), Expect = 1.052e-24 Identity = 69/189 (36.51%), Postives = 96/189 (50.79%), Query Frame = 0 Query: 34 DIKLQKDSKENGVQEEDERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGAT-------VLSAGKEAALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTCLECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLAEDAAIQKEGDLWNAHSKALL 215 D+ + +E G + E++ +V + + R + E KGG GR+ +G T V GK A ES+ A + +N++DK K Y+ PRG CLECK SKVKCD+ QP CTRC HGFLCIPQ RG GRPAKWR+YLA++ A+ LW ++ ++ Sbjct: 15 DVPRSQSKREGGENPQKEKENSNDHKVDREKLIASLDRSVGGLHEVKGGKEGRDDLQGDTRPMTSEAVFPEGKHADEWDDESQHAALQGVATENKDDKK-----KPKYQ--------GPRGRACLECKMSKVKCDRKQPHCTRCVSHGFLCIPQNRGPGRPAKWRLYLADEDALDSSS-LWAGQARTMI 189
BLAST of EWM25186.1 vs. NCBI_GenBank
Match: gi|585106849|gb|EWM25187.1| (hypothetical protein Naga_100146g5 [Nannochloropsis gaditana]) HSP 1 Score: 67.0106 bits (162), Expect = 3.417e-8 Identity = 78/221 (35.29%), Postives = 105/221 (47.51%), Query Frame = 0 Query: 191 RMYLAEDAAIQKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTSTTRGTSLPASPPLPASLSPPLSDITGVSSSFRPP------HSQFSSSFLTRASGKRQMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHP--SFPSFATVAG-------TRGAVDRNNYLGNGMGG-YYSHGYPGSTQPNRPYSTPLRDM 395 R+YLA D A+Q D+ SKALLLS++Q S SAS +P LPPS LP S+ PP PAS+ P L + ++ PP S + GKR+ P +E E +++AARSLK LK+G AS FP S+S P + SFPS A G+++ N L +G GG + SH P Q Y +R+M Sbjct: 158 RLYLAADDAVQDGKDVLATQSKALLLSSSQLPPPPTSNSASYEPA----LPPSLLPSFPSSF--------PPNPASVGPLLQLSSAATT---PPLSSISSAPSVSPPYYPNPLGKREEHPVNEVESQMLAARSLKHLKDGHAS-FP-------SSSTPAYASSSFPSRGPPASEGRLYGPMHGSMNPN--LSSGYGGNFQSHLLPPGYQSYPSYGN-IREM 352
BLAST of EWM25186.1 vs. NCBI_GenBank
Match: gi|585106853|gb|EWM25191.1| (c6 finger domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 65.4698 bits (158), Expect = 1.183e-7 Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 147 GGTCLECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLA 195 G TCLECK SKVKCD+ QP CTRCAR C+PQ R GRP +W Y++ Sbjct: 75 GRTCLECKRSKVKCDRKQPSCTRCARSNLKCLPQKRKPGRP-RWGPYIS 122 The following BLAST results are available for this feature:
BLAST of EWM25186.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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