EWM25209.1, cds5469 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|585106886|gb|EWM25209.1| (n-glycosylase dna lyase [Nannochloropsis gaditana]) HSP 1 Score: 999.579 bits (2583), Expect = 0.000e+0 Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query: 1 MMNLVRSIGANCCKLDLHDLRYVIRLRFIISNSILSYATKGLNDVSGCERGFASTYYPSFAQHRRLCLSRHQPAPNTPLRYKNKIQVVTPTGGIIAAPFRSISAVHFSPSSCPIPAASLGAVSMAPKRKLASTRLNLEEREYSAKGWMDLDVPPHELRPEFSLTMGQCFNWRRQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLGKGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEKAEKGEEERATVIIEKTTEETIKDEILRTEERIVELEEEEGKVLRDVKTKAMSKRTKRQKVSISEEKNSCARTSMEAQGGGKHVKKEEKDS 484
MMNLVRSIGANCCKLDLHDLRYVIRLRFIISNSILSYATKGLNDVSGCERGFASTYYPSFAQHRRLCLSRHQPAPNTPLRYKNKIQVVTPTGGIIAAPFRSISAVHFSPSSCPIPAASLGAVSMAPKRKLASTRLNLEEREYSAKGWMDLDVPPHELRPEFSLTMGQCFNWRRQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLGKGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEKAEKGEEERATVIIEKTTEETIKDEILRTEERIVELEEEEGKVLRDVKTKAMSKRTKRQKVSISEEKNSCARTSMEAQGGGKHVKKEEKDS
Sbjct: 1 MMNLVRSIGANCCKLDLHDLRYVIRLRFIISNSILSYATKGLNDVSGCERGFASTYYPSFAQHRRLCLSRHQPAPNTPLRYKNKIQVVTPTGGIIAAPFRSISAVHFSPSSCPIPAASLGAVSMAPKRKLASTRLNLEEREYSAKGWMDLDVPPHELRPEFSLTMGQCFNWRRQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLGKGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEKAEKGEEERATVIIEKTTEETIKDEILRTEERIVELEEEEGKVLRDVKTKAMSKRTKRQKVSISEEKNSCARTSMEAQGGGKHVKKEEKDS 484
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|298713786|emb|CBJ27158.1| (endonuclease III/similar to 8-oxoguanine DNA glycosylase isoform 1b [Ectocarpus siliculosus]) HSP 1 Score: 255.758 bits (652), Expect = 1.079e-76 Identity = 132/248 (53.23%), Postives = 166/248 (66.94%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPL---GKG-----------------------YHAFPPLSSLAS-ASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKE 393
RQDPVEC+FSFICSSNNNIPRI ML +LR+TYG+ L GKG H+FP + +LA+ A+E +LR +G GYRA++I +A + GG W + +R K R+E + L GVG KVADC+ALFSLDQ IPVDVHVWRIACRDY P L E KSLTP VY VG++FR++FG AGWAHSLLFAAELP ++A+L +Q +M FK+EE KA + +A+KA+RKE
Sbjct: 150 RQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNITECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLMHSNGGAGWALDMRNKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGNLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDEFKREEREAKA-ESKAEKARRKE 396
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|873240079|emb|CEL93771.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 236.113 bits (601), Expect = 7.299e-69 Identity = 127/273 (46.52%), Postives = 160/273 (58.61%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPL----------------------------------------------------GKGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLRE--KSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKR 391
+QD ECLF+FICSSNNNI RI LM+DRL++ YG+ + G +++FP + LA+ASE+ LR +GLGYRA+ + TA L +LGG +L L+ +R+E Q+ L F GVGRKVADCV LFSLD+ AIPVD HVWRIACRD L+ KSLTPAVY+ VGD+FR+++GS AGWAHSLLF AELP +RARLP LQ EM F E K +R A+K +R
Sbjct: 145 QQDATECLFTFICSSNNNISRITLMIDRLKRHYGDLIATITSPTPTLTGAALQEHQDSISRDGSGGGLRSSSDERRAEEEGGGGEHAGSGYSWYSFPTIDRLAAASEQGLRSIGLGYRAKSVVETAKALKELGGEAFLQKLKSPTMTRQEVQKELLQFRGVGRKVADCVGLFSLDRFDAIPVDTHVWRIACRDLDRSLQSAKSLTPAVYDRVGDLFRDRYGSRAGWAHSLLFTAELPAFRARLPASLQQEMSEFAVSEKEAKKTERAARKRRR 417
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|922854702|gb|KOO23215.1| (endonuclease iii 8-oxoguanine DNA glycosylase isoform 1b [Chrysochromulina sp. CCMP291]) HSP 1 Score: 229.95 bits (585), Expect = 7.925e-68 Identity = 133/262 (50.76%), Postives = 166/262 (63.36%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE-----------------------PLGKG----YHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLR-EKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEKAE-KGEEERATV 405
RQDP ECLFSFICSSNNNI RI ML +R+ YG P+G G ++ FP +++A+ASEEELR LGLGYRA +++ TA Q L G WL SLR E+ + L PGVG KVADCVALFSLDQH +PVDVHVW IACR++ P L + KSLTP VY VG+ FR +GSHAGWAHS LFAAELP +R +LP ++ +M F + E +KA+ R +KA+ + KAE K E+E T+
Sbjct: 15 RQDPEECLFSFICSSNNNIKRIGGMLQSIRQQYGTKIPLATLGAEAASEQAAATELSAPVGHGGAADFYTFPSAAAMAAASEEELRKLGLGYRAPYLRQTA-QRLTREGASWLKSLRMERDPNVVRATLTELPGVGPKVADCVALFSLDQHSCVPVDVHVWEIACREFDPTLAQEKSLTPKVYARVGEQFRRAYGSHAGWAHSYLFAAELPTFRDQLPEAMRQKMALFAEHEREKKAVARAEKKARAEAKAEIKDEDENKTL 275
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|676386323|ref|XP_009036440.1| (hypothetical protein AURANDRAFT_3135, partial [Aureococcus anophagefferens] >gi|323452587|gb|EGB08460.1| hypothetical protein AURANDRAFT_3135, partial [Aureococcus anophagefferens]) HSP 1 Score: 221.476 bits (563), Expect = 7.975e-65 Identity = 116/213 (54.46%), Postives = 139/213 (65.26%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE----PLGKGYHA-----FPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEE 376
RQDP+ECL SFICSSNNNIPRI LML RLR+ G+ P G G A FP L L E LR LG GYRA ++ TA + D GG WL LR R + + AL GVG KVADCVALFSLDQ A+PVD HVWRIA RD+ P L + S+TP VY+ VGD+FR++F +AGWAH++LFAAELP + +LP + EM AF+ E
Sbjct: 107 RQDPLECLISFICSSNNNIPRITLMLGRLRELCGDVAAVPGGAGMEASEPRTFPTLERLCGVEERTLRDLGFGYRAPYVAKTARHVRDKGGDAWLAGLRNADRADVKVALLECAGVGPKVADCVALFSLDQADAVPVDTHVWRIARRDFDPTLDDVASITPKVYDRVGDLFRDRF-DNAGWAHTVLFAAELPLFADKLPEDVAAEMRAFRVLE 318
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|673030250|ref|XP_008869086.1| (hypothetical protein H310_05982 [Aphanomyces invadans] >gi|574475481|gb|ETW02481.1| hypothetical protein H310_05982 [Aphanomyces invadans]) HSP 1 Score: 221.09 bits (562), Expect = 4.080e-64 Identity = 109/194 (56.19%), Postives = 136/194 (70.10%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLGK----GYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREK-SREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARL 361
RQDPVECLFSFICSSNNNI RI ++D+LR YG+ L + AFP + LAS E +LR LG GYRA++I +A+ L DLGG E+L+SLR Q AL F GVGRKVADCVALFSLD+ AIPVD HVW+I+CRD+ KSLTP +Y VG +++N+F +AGWAHS+LFAA+L ++A L
Sbjct: 126 RQDPVECLFSFICSSNNNIARIQQLVDKLRVNYGDKLAAIDDMTWFAFPTVDQLASIDESQLRELGFGYRAQYIVKSAAILSDLGGEEYLLSLRANPDAAHVQTALTQFSGVGRKVADCVALFSLDKLEAIPVDTHVWQISCRDFQFKKAATKSLTPTIYAEVGKLYQNRFQPYAGWAHSILFAADLTKFKAIL 319
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|567990042|gb|ETL40279.1| (hypothetical protein L916_08506 [Phytophthora parasitica]) HSP 1 Score: 222.631 bits (566), Expect = 4.450e-64 Identity = 120/243 (49.38%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE---PLGKG------YHAFPPLSSLASASEE-ELRGLGLGYRARFIKLTASQLLDLGGREWLMSLR-----------EKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEK 394
RQDPVECLFSFICSSNNNI RI M+D+L+ TYG+ LG+G ++AFP + +LA+ EE LR LG GYRA FI TA QL +LGG +L ++R E S Q L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ L + KS+TP+VY VGD+FR +F AGWAHS+LFA +L ++ +P G+EK K + + +KRK K
Sbjct: 164 RQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP--------------GVEKKPKEKQKSSKRKFK 392
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|570327727|gb|ETO75675.1| (hypothetical protein F444_08802 [Phytophthora parasitica P1976]) HSP 1 Score: 222.631 bits (566), Expect = 4.497e-64 Identity = 120/243 (49.38%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE---PLGKG------YHAFPPLSSLASASEE-ELRGLGLGYRARFIKLTASQLLDLGGREWLMSLR-----------EKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEK 394
RQDPVECLFSFICSSNNNI RI M+D+L+ TYG+ LG+G ++AFP + +LA+ EE LR LG GYRA FI TA QL +LGG +L ++R E S Q L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ L + KS+TP+VY VGD+FR +F AGWAHS+LFA +L ++ +P G+EK K + + +KRK K
Sbjct: 164 RQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP--------------GVEKKPKEKQKSSKRKFK 392
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|567961321|gb|ETK86866.1| (hypothetical protein L915_08576 [Phytophthora parasitica]) HSP 1 Score: 222.631 bits (566), Expect = 4.692e-64 Identity = 120/243 (49.38%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE---PLGKG------YHAFPPLSSLASASEE-ELRGLGLGYRARFIKLTASQLLDLGGREWLMSLR-----------EKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEK 394
RQDPVECLFSFICSSNNNI RI M+D+L+ TYG+ LG+G ++AFP + +LA+ EE LR LG GYRA FI TA QL +LGG +L ++R E S Q L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ L + KS+TP+VY VGD+FR +F AGWAHS+LFA +L ++ +P G+EK K + + +KRK K
Sbjct: 164 RQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLNNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP--------------GVEKKPKEKQKSSKRKFK 392
BLAST of EWM25209.1 vs. NCBI_GenBank
Match: gi|570985543|gb|ETP44804.1| (hypothetical protein F442_08681 [Phytophthora parasitica P10297]) HSP 1 Score: 222.246 bits (565), Expect = 6.516e-64 Identity = 120/243 (49.38%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGE---PLGKG------YHAFPPLSSLASASEE-ELRGLGLGYRARFIKLTASQLLDLGGREWLMSLR-----------EKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKALKREAQKAKRKEK 394
RQDPVECLFSFICSSNNNI RI M+D+L+ TYG+ LG+G ++AFP + +LA+ EE LR LG GYRA FI TA QL +LGG +L ++R E S Q L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ L + KS+TP+VY VGD+FR +F AGWAHS+LFA +L ++ +P G+EK K + + +KRK K
Sbjct: 164 RQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP--------------GVEKKPKEKQKSSKRKFK 392 The following BLAST results are available for this feature:
BLAST of EWM25209.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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