EWM25215.1, cds5458 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|585106898|gb|EWM25215.1| (Forkhead-associated domain containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MLAAIASQHEKVEASMKIPPSFPAFLSASPCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEYTAPPGEDGPGDDGEDAEATLPFQEGRENVAPTTHVRKSGNRPSPTATHQVSACDKENLSCPSKNLRDANTGPLPLKLKNSEKYSSPIKQKGKDPPPPPTGISLRPKNLPNRSLPAIAKDVAASPPPSLPRSAPMKVATIPPSLRAAINARRQSYNQQPVQEEVECAEEY 310
MLAAIASQHEKVEASMKIPPSFPAFLSASPCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEYTAPPGEDGPGDDGEDAEATLPFQEGRENVAPTTHVRKSGNRPSPTATHQVSACDKENLSCPSKNLRDANTGPLPLKLKNSEKYSSPIKQKGKDPPPPPTGISLRPKNLPNRSLPAIAKDVAASPPPSLPRSAPMKVATIPPSLRAAINARRQSYNQQPVQEEVECAEEY
Sbjct: 1 MLAAIASQHEKVEASMKIPPSFPAFLSASPCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEYTAPPGEDGPGDDGEDAEATLPFQEGRENVAPTTHVRKSGNRPSPTATHQVSACDKENLSCPSKNLRDANTGPLPLKLKNSEKYSSPIKQKGKDPPPPPTGISLRPKNLPNRSLPAIAKDVAASPPPSLPRSAPMKVATIPPSLRAAINARRQSYNQQPVQEEVECAEEY 310
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|919027981|ref|XP_013397823.1| (PREDICTED: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like [Lingula anatina] >gi|919027983|ref|XP_013397824.1| PREDICTED: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like [Lingula anatina]) HSP 1 Score: 116.316 bits (290), Expect = 3.357e-25 Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 33 GKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEYTAPPG 146
GK++V++RNG DG HFPLT IGR +CDIRI LP VS++H + ID + G+ + +TN S VNPT VNGT L K T + H DVF V DRSFRFE+ PPG
Sbjct: 4 GKIVVIKRNGADGAHFPLTATSCLIGRSNDCDIRIQLPNVSKEHCK---IDVNQEGQ------IFVTNLSTVNPTMVNGTSLTK----TMLIGHNDVFTVIDRSFRFEF--PPG 102
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|558154471|ref|XP_006121434.1| (PREDICTED: antigen KI-67 [Pelodiscus sinensis] >gi|558154480|ref|XP_006121436.1| PREDICTED: antigen KI-67 [Pelodiscus sinensis] >gi|946643934|ref|XP_014428163.1| PREDICTED: antigen KI-67 [Pelodiscus sinensis]) HSP 1 Score: 105.916 bits (263), Expect = 8.198e-25 Identity = 54/112 (48.21%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEY 141
P GK+IV++RNG DG HFPLT GR CDIRI LP VS++H + I+ E EA L N S +NPT +NG Q+ L+HGDVF + DRSFRFEY
Sbjct: 2 PLFGKIIVIKRNGTDGIHFPLTASSCLFGRKTECDIRIQLPQVSKEHCK---IEVNENKEA------ILFNLSTLNPTHLNGNSFQQ----PVHLKHGDVFTIVDRSFRFEY 100
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|1072239219|ref|XP_018413316.1| (PREDICTED: antigen KI-67 [Nanorana parkeri]) HSP 1 Score: 114.39 bits (285), Expect = 1.870e-24 Identity = 55/111 (49.55%), Postives = 68/111 (61.26%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFE 140
PC GK+IV++R+G DG HFPLT GR CDIRI LP VS++H ++ V E GE V +TN S VNP +NG L K T RL+HGD+ + DRSFRFE
Sbjct: 2 PCRGKIIVIKRSGADGTHFPLTAATCLFGRKSECDIRIQLPHVSKEHCKVEV---KENGE------VLVTNLSSVNPAQLNGNAL----KQTVRLKHGDIITIIDRSFRFE 99
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|697417839|gb|KGL78864.1| (Antigen KI-67, partial [Tinamus guttatus]) HSP 1 Score: 104.76 bits (260), Expect = 3.587e-24 Identity = 56/112 (50.00%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEY 141
P GKVIV++RNG DG HFPLT GR CDIRI LP VS++H + I+ E EA LTN S VNPT +NG Q+ L+HGDV + DRSFRFEY
Sbjct: 2 PLFGKVIVIKRNGADGIHFPLTASSCLFGRKTECDIRIQLPQVSKEHCK---IEVNENKEA------VLTNLSAVNPTQLNGGCFQQPVP----LKHGDVLTIIDRSFRFEY 100
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|678212051|gb|KFV79030.1| (Antigen KI-67, partial [Struthio camelus australis]) HSP 1 Score: 104.76 bits (260), Expect = 3.943e-24 Identity = 54/112 (48.21%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEY 141
P GK++V++R G DG HFPLT GR CDIRI LP VS++H + I+ E EA LTN S VNPT +NG Q+ L+HGDVF + DRSFRFEY
Sbjct: 2 PLFGKIVVIKRTGTDGIHFPLTASSCLFGRKIECDIRIQLPQVSKEHCK---IEVNENKEA------ILTNLSTVNPTQLNGGCFQQ----PVALKHGDVFTIIDRSFRFEY 100
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|597783375|ref|XP_007255212.1| (PREDICTED: antigen KI-67-like isoform X1 [Astyanax mexicanus]) HSP 1 Score: 113.235 bits (282), Expect = 4.311e-24 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEYTAPP 145
P GK++V++RNG DG FPLT GR CDIRI LP VS++H ++ + + E + LTN S VNPT +NG KLQ+ + RL+HGD+ + DRSFRFEY +PP
Sbjct: 2 PLHGKIVVIKRNGADGVEFPLT-ASCLFGRKPECDIRIQLPQVSKEHCKIELNENKE---------LILTNLSSVNPTCINGEKLQQ----SERLKHGDLITIIDRSFRFEYPSPP 103
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|597783377|ref|XP_007255213.1| (PREDICTED: antigen KI-67-like isoform X2 [Astyanax mexicanus]) HSP 1 Score: 113.235 bits (282), Expect = 4.391e-24 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEYTAPP 145
P GK++V++RNG DG FPLT GR CDIRI LP VS++H ++ + + E + LTN S VNPT +NG KLQ+ + RL+HGD+ + DRSFRFEY +PP
Sbjct: 2 PLHGKIVVIKRNGADGVEFPLT-ASCLFGRKPECDIRIQLPQVSKEHCKIELNENKE---------LILTNLSSVNPTCINGEKLQQ----SERLKHGDLITIIDRSFRFEYPSPP 103
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|530620044|ref|XP_005299707.1| (PREDICTED: antigen KI-67 [Chrysemys picta bellii]) HSP 1 Score: 113.235 bits (282), Expect = 4.403e-24 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEY 141
P GK++V++RNG DG HFPLT GR CDIRI LP VS++H ++ V + E L N S VNPT +NG Q+ A L+HGDVF + DRSFRFEY
Sbjct: 2 PLFGKIVVIKRNGTDGIHFPLTASSCLFGRKTECDIRIQLPQVSKEHCKIEVNENKEA---------ILINLSTVNPTQLNGNSFQQ----PAHLKHGDVFTIVDRSFRFEY 100
BLAST of EWM25215.1 vs. NCBI_GenBank
Match: gi|591377690|ref|XP_007053101.1| (PREDICTED: antigen KI-67-like [Chelonia mydas]) HSP 1 Score: 112.849 bits (281), Expect = 5.167e-24 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 0
Query: 30 PCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTKGTARLRHGDVFVVADRSFRFEY 141
P GK++V++RNG DG HFPLT GR CDIRI LP VS++H ++ V + E L N S VNPT +NG Q+ A L+HGDVF + DRSFRFEY
Sbjct: 2 PLFGKIVVIKRNGTDGIHFPLTASSCLFGRKTECDIRIQLPQVSKEHCKIEVNENKEA---------ILINLSTVNPTQLNGNSFQQ----PAHLKHGDVFTIVDRSFRFEY 100 The following BLAST results are available for this feature:
BLAST of EWM25215.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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