EWM25216.1, cds5457 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|585106899|gb|EWM25216.1| (hypothetical protein Naga_100751g2 [Nannochloropsis gaditana]) HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query: 1 MPQSPTRKAPLNSSTSSPSSSALYSSLTQQRCVKYENSFSATLSSVSNEQSQTNVVVEEGTQSRREEMKGEEDAEEEEEEEEEEEEEEEEEEEEERRRKKNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFPEQAPEGSLEPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQSHRQGIDIFGDEARKARIRGLAIVNKEEQETKHASM 371
MPQSPTRKAPLNSSTSSPSSSALYSSLTQQRCVKYENSFSATLSSVSNEQSQTNVVVEEGTQSRREEMKGEEDAEEEEEEEEEEEEEEEEEEEEERRRKKNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFPEQAPEGSLEPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQSHRQGIDIFGDEARKARIRGLAIVNKEEQETKHASM
Sbjct: 1 MPQSPTRKAPLNSSTSSPSSSALYSSLTQQRCVKYENSFSATLSSVSNEQSQTNVVVEEGTQSRREEMKGEEDAEEEEEEEEEEEEEEEEEEEEERRRKKNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFPEQAPEGSLEPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQSHRQGIDIFGDEARKARIRGLAIVNKEEQETKHASM 371
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|566034516|gb|ETI57427.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|568029639|gb|ETM03560.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568060304|gb|ETM56843.1| hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 105.145 bits (261), Expect = 1.429e-21 Identity = 70/240 (29.17%), Postives = 118/240 (49.17%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQ 335
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K PH++
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPVYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRI-KVPHYE 410
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|567972191|gb|ETK97179.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568000507|gb|ETL50522.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570962210|gb|ETP27189.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 105.145 bits (261), Expect = 1.457e-21 Identity = 70/240 (29.17%), Postives = 118/240 (49.17%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQ 335
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K PH++
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPVYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRI-KVPHYE 410
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|570999065|gb|ETP55152.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 105.145 bits (261), Expect = 1.560e-21 Identity = 70/240 (29.17%), Postives = 118/240 (49.17%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQ 335
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K PH++
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPVYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRI-KVPHYE 410
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|301112513|ref|XP_002998027.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112321|gb|EEY70373.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 103.605 bits (257), Expect = 8.938e-21 Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 0
Query: 111 LQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKS------IDTPFPEQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGK 330
L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S +DT E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K
Sbjct: 215 LEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKMMVATSSTLHEPLDT---ENSPQYSADEPFRPTMHKWNQRPVYRRLLTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRIKK 407
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|570999064|gb|ETP55151.1| (hypothetical protein F442_00267 [Phytophthora parasitica P10297]) HSP 1 Score: 103.219 bits (256), Expect = 1.084e-20 Identity = 68/235 (28.94%), Postives = 114/235 (48.51%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGK 330
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPVYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRIKK 406
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|567972190|gb|ETK97178.1| (hypothetical protein L915_00245 [Phytophthora parasitica] >gi|568000506|gb|ETL50521.1| hypothetical protein L916_00248 [Phytophthora parasitica] >gi|570962209|gb|ETP27188.1| hypothetical protein F441_00269 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 103.219 bits (256), Expect = 1.115e-20 Identity = 68/235 (28.94%), Postives = 114/235 (48.51%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGK 330
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPVYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRIKK 406
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|566034515|gb|ETI57426.1| (hypothetical protein F443_00284 [Phytophthora parasitica P1569] >gi|568029638|gb|ETM03559.1| hypothetical protein L917_00234 [Phytophthora parasitica] >gi|568060303|gb|ETM56842.1| hypothetical protein L914_00252 [Phytophthora parasitica]) HSP 1 Score: 103.219 bits (256), Expect = 1.148e-20 Identity = 68/235 (28.94%), Postives = 114/235 (48.51%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGK 330
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ V++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPVYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRIKK 406
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|298710175|emb|CBJ26250.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.7525 bits (247), Expect = 2.862e-20 Identity = 73/251 (29.08%), Postives = 118/251 (47.01%), Query Frame = 0
Query: 107 RHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGAL--QAMKFLLAKSIDT--------PFPEQAPEGSLEPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQSHRQGIDIFGDE 347
R V+++ALV KR Y++K H+ G +WL+ V L++ +++ S R L F+LGV + LL++ L +R + QL EE EYH + + ++K +LAK+ID E+ E I R+ +F+NEVV++N P +PF LDYLEV+ SLC + +Y + ++A +++ LVK+D K+ HH I++F E
Sbjct: 69 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLE------------------------------LIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNLDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFSLDYLEVVFSLCEVMCRIYAKFVEEECY---KNAFVYDGLVKVDNKI---KHHI-----INVFAKE 278
BLAST of EWM25216.1 vs. NCBI_GenBank
Match: gi|675161921|ref|XP_008889845.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568109070|gb|ETN23677.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 101.679 bits (252), Expect = 3.149e-20 Identity = 68/240 (28.33%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 100 KNASLHTRHVQLQALVEKRILNLDYIRKVHKGGQYWLHTVLLSQNVIHHYVRSQVPSSRALVFFHLGVSVFPLLEAPSALRPHPHSGGESESTTVSEGEERRLSGKEECISQLRSLAQLFEEMEYHTSTGALQAMKFLLAKSIDTPFP---EQAPEGSL-EPINPRIVRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGRRHAASLERDAALFEVLVKIDAKVGKAPHHQ 335
+ S R L+ LV+ R + +Y++ +H+G YWL+ LL + + ++V + R FF+LG+ + L V E L + C QL EE+E++ S+ +Q MK ++A S P E +P+ S EP P + +++ ++ P IPFPLDY E+L SLC LAL+Y +L ++AS + LF+ +++ D ++ K P+++
Sbjct: 203 RQVSAQQRMRILEDLVQHRRSDWNYLKAMHEGSNYWLNVALLREQQVMNHVGYKQSIRRGAQFFYLGIGLGRL---------------------VGESTHPELLAMDCC--------QLLEELEFYFSSSTVQGMKLMVATSSTLHEPLGKENSPQYSADEPFRPTMHKWNQRPAYRRLMTPPIPFPLDYREILLSLCDILALIYSKLVEDNSAS--ENLNLFQSIIRFDDRI-KVPYYE 410 The following BLAST results are available for this feature:
BLAST of EWM25216.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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