EWM25220.1, cds5454 (CDS) Nannochloropsis gaditana

Overview
NameEWM25220.1
Unique Namecds5454
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:15144..15449 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25220.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100790g2.7584.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:15144..15449 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25220.1 vs. NCBI_GenBank
Match: gi|585106908|gb|EWM25220.1| (hypothetical protein Naga_100790g2 [Nannochloropsis gaditana])

HSP 1 Score: 212.231 bits (539), Expect = 9.887e-70
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 
Query:    1 MGYLQGFWCQVNIERRNTSPTKIAGMYNEAIRGLSTKPLVVSHEVPEMDWRQLSAPVKILIPPSAHSLRRKCGKLSAHISLEESTRFFFLSLKEFVSTNTK 101
            MGYLQGFWCQVNIERRNTSPTKIAGMYNEAIRGLSTKPLVVSHEVPEMDWRQLSAPVKILIPPSAHSLRRKCGKLSAHISLEESTRFFFLSLKEFVSTNTK
Sbjct:    1 MGYLQGFWCQVNIERRNTSPTKIAGMYNEAIRGLSTKPLVVSHEVPEMDWRQLSAPVKILIPPSAHSLRRKCGKLSAHISLEESTRFFFLSLKEFVSTNTK 101
The following BLAST results are available for this feature:
BLAST of EWM25220.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106908|gb|EWM25220.1|9.887e-70100.00hypothetical protein Naga_100790g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5467rna5467Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications