EWM25224.1, cds5434 (CDS) Nannochloropsis gaditana

Overview
NameEWM25224.1
Unique Namecds5434
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:1026550..1026723 -
Alignment locationCM002465.1:1026120..1026206 -
Alignment locationCM002465.1:1025691..1025825 -
Alignment locationCM002465.1:1025371..1025467 -
Alignment locationCM002465.1:1025197..1025273 -
Alignment locationCM002465.1:1025011..1025087 -
Alignment locationCM002465.1:1024613..1024709 -
Alignment locationCM002465.1:1024341..1024443 -
Alignment locationCM002465.1:1023973..1024180 -
Alignment locationCM002465.1:1023380..1023716 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25224.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100089g2.9633.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:1026550..1026723 -
CM002465.1supercontigCM002465.1:1026120..1026206 -
CM002465.1supercontigCM002465.1:1025691..1025825 -
CM002465.1supercontigCM002465.1:1025371..1025467 -
CM002465.1supercontigCM002465.1:1025197..1025273 -
CM002465.1supercontigCM002465.1:1025011..1025087 -
CM002465.1supercontigCM002465.1:1024613..1024709 -
CM002465.1supercontigCM002465.1:1024341..1024443 -
CM002465.1supercontigCM002465.1:1023973..1024180 -
CM002465.1supercontigCM002465.1:1023380..1023716 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|585106916|gb|EWM25224.1| (hypothetical protein Naga_100089g2 [Nannochloropsis gaditana])

HSP 1 Score: 964.526 bits (2492), Expect = 0.000e+0
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query:    1 MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGTRLQSSERHSEYTPLDRIKFILYPHPGTSGWVYLCFSLK 463
            MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGTRLQSSERHSEYTPLDRIKFILYPHPGTSGWVYLCFSLK
Sbjct:    1 MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGTRLQSSERHSEYTPLDRIKFILYPHPGTSGWVYLCFSLK 463          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|585106917|gb|EWM25225.1| (hypothetical protein Naga_100089g2 [Nannochloropsis gaditana])

HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0
Identity = 411/425 (96.71%), Postives = 414/425 (97.41%), Query Frame = 0
Query:    1 MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGT 425
            MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFE           +L+G+
Sbjct:    1 MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEDPAHSVNLTATELQGS 425          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|585106918|gb|EWM25226.1| (hypothetical protein Naga_100089g2 [Nannochloropsis gaditana])

HSP 1 Score: 851.277 bits (2198), Expect = 0.000e+0
Identity = 411/425 (96.71%), Postives = 414/425 (97.41%), Query Frame = 0
Query:    1 MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGT 425
            MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFE           +L+G+
Sbjct:    1 MRFQYSSTMAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEDPAHSVNLTATELQGS 425          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|585111630|gb|EWM29110.1| (hypothetical protein Naga_100007g53 [Nannochloropsis gaditana])

HSP 1 Score: 315.464 bits (807), Expect = 3.777e-98
Identity = 164/406 (40.39%), Postives = 239/406 (58.87%), Query Frame = 0
Query:   17 LAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRF-----SPSVWFPAAELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRG------AKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAY-ASKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGW-PSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFE 409
            +  TV   E  I CDTT  +R  ++  ALG L +   +++ +G L+F+    GNPAG+YG V F     P  L ++       P+P     ++F +GP+DA+ W GCTPPP  YFSIRSY+A+RF     + S + P AELGDP N+  + +TGGP DPF KTT+  STGD+     V+ AFA+AG P  ++NLDV+P+EL RFR+   T  W  D+SD  AWQFRV++F +P    AY D+ WPV+ LRA+P    RG      A P+  P  + RGTG+ E +L  +L+KL E +       +G  L++ FP+   +PD  RC++D  Y P+  P+P W+     P+CDWF+ D+LY+  P  +D      P +R  +V+GVN   L K+ ++N ++T + + E
Sbjct:   37 IIQTVASEEDGIVCDTTGAKRHKVLAQALGTLFDQ--YEIHEGNLSFHMG--GNPAGKYGVVKFDEALIPKALKRAAKATAGFPVPI---EVSFLMGPQDAVFWYGCTPPPTRYFSIRSYLAYRFPGEGRNISGYMPGAELGDPVNNAVIRTTGGPTDPFGKTTLFVSTGDKVAFHRVREAFAQAGLPGEAANLDVLPSELVRFRD--TTLPWAVDRSDTIAWQFRVNEFINPAEGSAYLDKVWPVFLLRAKPSEGGRGDGGVAPAMPLTAPPLKTRGTGESEEWLRSALEKLVEAVKTRMEVDRGLVLTHSFPLAPCMPDAIRCISDLDYCPVAMPIPQWNLTACNPTCDWFTRDSLYSTPPADSDFINFMIPRDRVLIVVGVNHVLLGKAAFTNFLVTGIRNPE 433          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|585100673|gb|EWM20787.1| (hypothetical protein Naga_100423g2 [Nannochloropsis gaditana])

HSP 1 Score: 296.204 bits (757), Expect = 1.318e-90
Identity = 191/493 (38.74%), Postives = 251/493 (50.91%), Query Frame = 0
Query:    1 MRFQYSSTMAVFLVL-LLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFP-TWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTG-----GP-------------EDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEY-------------------------------------------EKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYA-SKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGL-PDTT---DLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGT 425
            MRF      A FL+L +++          +CDTT  ER  ++   L +L    +++ + G+L+F       PAGRYG V+F      P  LC+ T+   T P     CN +F LGPRDA+V L CTPPP  YFS+RSY  FRF P  W PA EL DP N++T N+TG     GP               PF +T    STGD  TAR V+RA A AG+   ++NLDV+ AE A FR+ +    W  D+SDAF   +RVSQ  D  A   YF  ++P Y LR RPE                                            E    +P+  P  RPRGTGQDE+YL P+L +LEE +      S+G+ L  R+ M+HI+PD +RCLT+P Y PI   VP W+  G+ +C +FS D LYT L P TT   D   LTFP NR+FV +G NQ  L+K  YSN+ +TA A  +          + L G+
Sbjct:    5 MRFH-----ACFLLLNVISGFQAYARQTTKCDTTEAERAEVMRRTLESLE--NEYEFLPGSLSFP--PFAQPAGRYGLVAFDGKVVNPPALCEITSRVDT-PYGPGLCNYSFVLGPRDAVVGLFCTPPPVKYFSLRSYTGFRFRPQAWLPAVELADPDNNLTFNTTGRLPREGPYLQGKREGSAESDAAPFCRTAAFVSTGDGVTARDVRRALANAGWAATATNLDVVSAEKAYFRDVRRP--WAIDRSDAFVINYRVSQPIDSAAVAPYFASSYPFYMLRHRPEVSSATSNRELGNASGAPAQATLPTSGYLNMAPGGNLGHLPDIEDENAPREPLTTPPLRPRGTGQDESYLLPTLARLEEAVTAYMGRSRGAVLHARWEMEHILPDTQRCLTEPDYFPIAASVPEWNLTGFATCGFFSRDCLYTFLSPPTTGKVDYGDLTFPRNRSFVFLGANQVGLEKVTYSNIFMTATAEPQKQGRTVNFSAQALEGS 485          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|553189245|ref|XP_005854962.1| (hypothetical protein NGA_0379900 [Nannochloropsis gaditana CCMP526] >gi|422294102|gb|EKU21402.1| hypothetical protein NGA_0379900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 267.7 bits (683), Expect = 6.166e-80
Identity = 157/369 (42.55%), Postives = 197/369 (53.39%), Query Frame = 0
Query:  105 FCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAAELGDPANHMTLNSTG-----GP-------------EDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEY-------------------------------------------EKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYA-SKGSKLSYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGL-PDTT---DLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAH 407
             CN +F LGPRDA+V L CTPPP  YFS+RSY  FRF P  W PA EL DP N++T N+TG     GP               PF +T    STGD  TAR V+RA A AG+   ++NLDV+ AE A FR+ +    W  D+SDAF   +RVSQ  D  A   YF  ++P Y LR RPE                                            E    +P+  P  RPRGTGQDE+YL P+L +LEE +      S+G+ L  R+ M+HI+PD +RCLT+P Y PI   VP W+  G+ +C +FS D LYT L P TT   D   LTFP NR+FV +G NQ  L+K  YSN+ +TA A 
Sbjct:   21 LCNYSFVLGPRDAVVGLFCTPPPVKYFSLRSYTGFRFRPQAWLPAVELADPDNNLTFNTTGRLPREGPYLQGKREGSAESDAAPFCRTAAFVSTGDGVTARDVRRALANAGWAATATNLDVVSAEKAYFRDVRRP--WAIDRSDAFVINYRVSQPIDSAAVAPYFASSYPFYMLRHRPEVSSATSNRELGNASSAPAQATLPTSGYLNMAPGGNLGHLPDIEDENAPREPLTTPHLRPRGTGQDESYLLPTLARLEEAVTAYMGRSRGAVLHARWEMEHILPDTQRCLTEPDYFPIAASVPEWNLTGFATCGFFSRDCLYTFLSPPTTGKVDYGDLTFPRNRSFVFLGANQVGLEKVTYSNIFMTATAE 387          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|922868226|gb|KOO34667.1| (hypothetical protein Ctob_009281 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 114.005 bits (284), Expect = 3.822e-24
Identity = 88/296 (29.73%), Postives = 131/296 (44.26%), Query Frame = 0
Query:  150 AELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPE--YEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKL-----SYRFPMDHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACKGHKNKKLRGTRLQSSERHSEYTP 438
            +E GD  NH+ LN++     P+  T+ +  + D  T +    A   AG    + N DVI A L    ER      V D+ D      RV++    E    Y + +WPV  LRAR E  +E+    P+     R   TG +E+ L P L +L E ++  Y ++   L       ++ +D  + D  RCL DP + P   P+          C   + D LYTG+      S L   + R  V++GVN  R +KS Y NLML+A   + G K      +  +  T +Q S    +Y P
Sbjct:   45 SEYGDTLNHVVLNTSA--RRPWNSTSAIIVSADVRTIQQTSAALVAAGLESSAHNFDVINASLLHL-ERPHVPGLV-DRPDFLQTFVRVAEPASAEQLTEYLNVSWPVLLLRAREEAAFEQHAVPPL-----RNLKTGVNESALAPPLAQLREAVLAHYGARNRSLLSAEPVQQYHLDADLSDDLRCLVDPSFDPEPLPLDPNATTNRTGCGAATRDCLYTGVMAP---STLFLTSGRVLVLLGVNHRRTRKSAYGNLMLSA---YVGAKFTDYKYSVTINETDMQGSAH--QYVP 323          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|1084604694|gb|OGO58434.1| (hypothetical protein A2025_03095, partial [Chloroflexi bacterium RBG_19FT_COMBO_47_15])

HSP 1 Score: 107.457 bits (267), Expect = 6.501e-22
Identity = 81/309 (26.21%), Postives = 145/309 (46.93%), Query Frame = 0
Query:   12 FLVLLLAMTVVVIEGVIRCD------TTAKEREMIVEDALGNLRESQDFQVIQGTLTFNHRQIGNPAGRYGTVSFPTWSQP-LGLCKSTTFNQTSPIPFSFCN---IAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRFSPSVWFPAA---ELGDPANHMTLNSTGGPEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYA 307
             L++L+  T+++   ++ C       T+A + ++   + L ++ +   F V +G  ++        AG   T        P L         QT+P  F+       ++ L P +AI+ +G TPP + YF+ +SY++FR++ +          LGD  N +T+N+ G  ++PF++  +  +T D+     V+ A   AG+P G  N DVIP+ +            +++  D F +  RV+  +D ++ +AY +       LR  P+   +   P P PE R RGTG  E  L P++D L   I+  Y+
Sbjct:    7 LLLVLIVSTLLIFTTIVSCTVNEPSPTSATDGDI---ETLLDVLDKAGFYVQEGEYSYTDAIALCNAGVIKTCQGNNVGAPYLAYKLPPAPEQTTPNMFADSRGWAYSYRLRPDEAILQIGRTPPESRYFAYQSYLSFRYNATTKHYIQMFDSLGDTVNPLTINTKGKEDNPFDQPVIFITTADKGIDTRVRTAVENAGYPSGIINTDVIPSSVVN--------MGLENDDDLFQFLSRVALPKDKDSLDAYINNPGST-VLRLTPKTPPK-LDPFPTPELRVRGTGNTEMDLLPAVDDLRAAILAKYS 302          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|585108095|gb|EWM26101.1| (hypothetical protein Naga_100014g81 [Nannochloropsis gaditana])

HSP 1 Score: 107.842 bits (268), Expect = 1.664e-21
Identity = 89/324 (27.47%), Postives = 140/324 (43.21%), Query Frame = 0
Query:  116 DAIVWLGCTPPPAAYFSIRSYVAFRF------------SPSVWFPAAELGDPANHMTLNSTGG---------PEDPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRA--RPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSKLSYRFPMDHIVPDI----ERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMK 412
            +AIV L CTPPPA YF + SYV  R             S  V  P AE+ +P N++ +N+T G         P   F   ++   +  RE  + +  AF +AG    +SN   + A+  R  +R +   W  +  D  +   RVS FED  AA+A+    WP +F++A   P Y++     +P        +G+ E    P++  L   II    + G     R      VP+      +CL +  +     P+      G   C + + D  Y     T+      F  ++ F+V+GV   RL  S YS++MLT+   +E + 
Sbjct:  144 EAIVLLFCTPPPAKYFGLTSYVTNRVLFNDTGGGRGDASLVVHMPLAEISNPLNYLVMNTTKGTATAARKVDPSSFFNSLSLAVFSPSREVYQTITEAFVQAGLAERASNFYPLSAQTIRLHDRSKPFEW--NYPDRLSVLCRVSYFEDKAAADAWASHPWPAFFIKAPDLPHYQRS----VPEQRLLSDISGESEQTYLPTIHSLLAAIIANKTASGHARLLRQEQIVAVPNDRGTRNQCLNNNSFIAAVDPL---MMAG--GCGFGTTDCRY----GTSAALDQPFGLDKFFIVVGVQHERLGHSSYSSIMLTSQLGYEEIN 452          
BLAST of EWM25224.1 vs. NCBI_GenBank
Match: gi|805360968|gb|AKB40757.1| (hypothetical protein MSMAW_1766 [Methanosarcina mazei WWM610] >gi|814746906|gb|KKG28776.1| hypothetical protein DU52_05975 [Methanosarcina mazei] >gi|814749548|gb|KKG31286.1| hypothetical protein DU30_16650 [Methanosarcina mazei] >gi|814786182|gb|KKG66148.1| hypothetical protein DU67_06330 [Methanosarcina mazei] >gi|814788101|gb|KKG67955.1| hypothetical protein DU43_13215 [Methanosarcina mazei] >gi|814795624|gb|KKG75033.1| hypothetical protein DU63_17255 [Methanosarcina mazei] >gi|814808419|gb|KKG87125.1| hypothetical protein DU69_09470 [Methanosarcina mazei] >gi|814854050|gb|KKH30520.1| hypothetical protein DU58_10725 [Methanosarcina mazei] >gi|814866445|gb|KKH42331.1| hypothetical protein DU71_03315 [Methanosarcina mazei] >gi|814874705|gb|KKH50117.1| hypothetical protein DU72_09500 [Methanosarcina mazei] >gi|814880117|gb|KKH55201.1| hypothetical protein DU74_07520 [Methanosarcina mazei])

HSP 1 Score: 102.064 bits (253), Expect = 1.104e-19
Identity = 115/442 (26.02%), Postives = 178/442 (40.27%), Query Frame = 0
Query:    9 MAVFLVLLLAMTVVVIEGVIRCDTTAKEREMIVEDALGNLRESQDFQVIQGTLTF--NHRQI----------GNPAGRYGTVSFP------------TWSQPLGLCKSTTFNQTSPIPFSFCNIAFTLGPRDAIVWLGCTPPPAAYFSIRSYVAFRF--SPSVWFPAAELGDPANHMTLNSTGGPE----DPFEKTTMVFSTGDRETARHVKRAFAKAGFPRGSSNLDVIPAELARFRERQETAFWVQDKSDAFAWQFRVSQFEDPEAAEAYFDQTWPVYFLRARPEYEKRGAKPIPRPEARPRGTGQDEAYLHPSLDKLEEEIIVAYASKGSK---LSYRFPM--DHIVPDIERCLTDPQYAPIFKPVPAWHFPGWPSCDWFSADALYTGLPDTTDLSALTFPTNRTFVVMGVNQPRLQKSIYSNLMLTAVAHFEGMKACK 415
            M  +LV++LA+ + +  G       A++ E    +A     E   F V +G L F    R +           NP  +Y     P              +  LG+  +TT       PF      + LGP +A+V++G TPP   YFS  +YV  R   +   W   A   DP N++ + + G P+    DPF +TT++  T DR   + ++ A   AG+   + N  V+P+ +            V++ SD FA   R + F D +A E Y + T P    R  P        P   PE R RGTG+ E  L   L++L   I+  Y    +    +S   P+  D I   I     +   A ++        P  P   +F     Y  L D      L   +N + +V GVN     K++YSN  +     + G++A  
Sbjct:    1 MKNYLVVILAVLLTMSIGT----ALAQDMETNDTEAFQQALEQDGFTVQEGDLGFFDTIRLLEEGVLPSAYGNNPTTKYLIYFVPPAPGYEVDERISGLTNTLGIGGNTT-------PF------WNLGPDEAVVFVGRTPPECRYFSYDNYVIHRTVGNERRWV-FANFADPINNLVIKTEGTPDGASGDPFNQTTIIIITADRGIDQRIRDAAESAGYSNNTINTQVLPSVMLN--------MGVENDSDTFASFIRPALFNDTQAEENYINNT-PATIFRITPNNTTE-LDPYDYPELRVRGTGKTEFDLMDDLEELRVAILERYNESNATELPISVWAPVGTDAIQRGINVLGPNNDAAYLWTANQTISSPTPP---FFDTSEYYPFLRDPA--ITLGNDSNESIIVYGVNHVATGKAMYSNFAIYGADTWNGVRAIS 409          
The following BLAST results are available for this feature:
BLAST of EWM25224.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106916|gb|EWM25224.1|0.000e+0100.00hypothetical protein Naga_100089g2 [Nannochloropsi... [more]
gi|585106917|gb|EWM25225.1|0.000e+096.71hypothetical protein Naga_100089g2 [Nannochloropsi... [more]
gi|585106918|gb|EWM25226.1|0.000e+096.71hypothetical protein Naga_100089g2 [Nannochloropsi... [more]
gi|585111630|gb|EWM29110.1|3.777e-9840.39hypothetical protein Naga_100007g53 [Nannochlorops... [more]
gi|585100673|gb|EWM20787.1|1.318e-9038.74hypothetical protein Naga_100423g2 [Nannochloropsi... [more]
gi|553189245|ref|XP_005854962.1|6.166e-8042.55hypothetical protein NGA_0379900 [Nannochloropsis ... [more]
gi|922868226|gb|KOO34667.1|3.822e-2429.73hypothetical protein Ctob_009281 [Chrysochromulina... [more]
gi|1084604694|gb|OGO58434.1|6.501e-2226.21hypothetical protein A2025_03095, partial [Chlorof... [more]
gi|585108095|gb|EWM26101.1|1.664e-2127.47hypothetical protein Naga_100014g81 [Nannochlorops... [more]
gi|805360968|gb|AKB40757.1|1.104e-1926.02hypothetical protein MSMAW_1766 [Methanosarcina ma... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5447rna5447Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications