EWM25294.1, cds5377 (CDS) Nannochloropsis gaditana

Overview
NameEWM25294.1
Unique Namecds5377
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:887156..887158 +
Alignment locationCM002465.1:887287..887402 +
Alignment locationCM002465.1:887676..887775 +
Alignment locationCM002465.1:888021..888260 +
Alignment locationCM002465.1:888529..888722 +
Alignment locationCM002465.1:888890..889093 +
Alignment locationCM002465.1:889282..889456 +
Alignment locationCM002465.1:889824..890012 +
Alignment locationCM002465.1:890212..890220 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25294.1
Productmyb domain-containing protein
Orig transcript idgnl|cribi|Naga_100240g3.2372.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:887156..887158 +
CM002465.1supercontigCM002465.1:887287..887402 +
CM002465.1supercontigCM002465.1:887676..887775 +
CM002465.1supercontigCM002465.1:888021..888260 +
CM002465.1supercontigCM002465.1:888529..888722 +
CM002465.1supercontigCM002465.1:888890..889093 +
CM002465.1supercontigCM002465.1:889282..889456 +
CM002465.1supercontigCM002465.1:889824..890012 +
CM002465.1supercontigCM002465.1:890212..890220 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR027417P-loop_NTPase
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|585107044|gb|EWM25294.1| (myb domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 850.507 bits (2196), Expect = 0.000e+0
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQKFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQYE 409
            MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQKFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQYE
Sbjct:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQKFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQYE 409          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|219120207|ref|XP_002180847.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407563|gb|EEC47499.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 509.605 bits (1311), Expect = 4.035e-176
Identity = 249/417 (59.71%), Postives = 316/417 (75.78%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRF----PQKFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRE-RFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFL-LGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPA----SPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKT+QTV  V+ + ++    G FLVIAPLSTL HW REF  WTDL TIVYHGS +DR + R+ E+ +    P+   V+ITTPEM +A D   L  ++W  ++VDEAHRLKN +S+L++ LR+ RF +   +LLTGTP+QND+ E + LL+F+DP  F D+++F   YG+++ +  +  L E IRP++LRR+KEDVEK +PPKEET+I+VELT  QKQYYRA+YEKNV+FL    +KA+DGPSL NL M+LRKCCNH FL KGVE + R+     G +  S+AD LVQ SGKL+LLDKLLPRL++ GHRVL+FSQFKIMLDILEDY   R+  F RIDG++TG++RQQ +D FQ P      P F+M+LSTRAGGVGINLT+ADT IIFDSDWNPQND+QAQARCHRIGQ K V+
Sbjct:   54 MGLGKTLQTVGTVNIMATRLNGNGVFLVIAPLSTLSHWEREFKRWTDLNTIVYHGSGDDRRLIRELEFAYEDDRPKNTVVVITTPEMIVADDFVELTAVDWDAVIVDEAHRLKNHNSKLAINLRDNRFKFDHIILLTGTPIQNDVQEFWTLLNFIDPNGFDDVDKFMTKYGDMKSKERVDELHEEIRPFILRRLKEDVEKSVPPKEETLIEVELTLSQKQYYRALYEKNVKFLHKNNKKALDGPSLNNLAMQLRKCCNHVFLLKGVEEEFRN----KGSLTLSEADFLVQGSGKLILLDKLLPRLKSEGHRVLVFSQFKIMLDILEDYFSMREMKFERIDGSITGKRRQQAIDRFQAPEIDGRKPPFIMMLSTRAGGVGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQTKEVK 466          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|299115203|emb|CBN74034.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 494.582 bits (1272), Expect = 8.140e-159
Identity = 252/431 (58.47%), Postives = 312/431 (72.39%), Query Frame = 0
Query:    1 MGLGKTVQTVAFV---HSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ------------------KFQVLITTPEMCLAADASFLMD--LEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRK-AVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKT+QTVAF+   H+++ K    GPFLVIAPLST+ HW REF  W+D+  +V+HG  EDR +   YE  F                    K  V+ITTPE+C+  D   L+   + W +LVVDEAHRLKN+ SRL++ L++ + + S+LLLTGTPLQN+  EL+ LL+ VD   F D + F   YG+LQ+   ++ LQEAI+PYLLRRMKE VEK +PPKEE II+VELT +QKQYYRAIY++N  FLL G+K A D PSLMNL M+LRKCCNHPFL  GVE D+   ++  G   TS  + LV++SGKLVLLDKLLPRL+  GHRVLLFSQFKIMLDILEDYL     S+GRIDG + G +RQ+++D FQ P S + VMLLSTRAGGVGI LT+ADT II+DSDWNPQND+QAQARCHRIGQ K+V+
Sbjct:  437 MGLGKTLQTVAFLSILHNVYGKR---GPFLVIAPLSTVPHWLREFQTWSDMNAVVFHGDPEDREILEGYEMEFAGDKGRAEKDKTRIKGKRVWKSTVVITTPELCIRKDVKTLLQRRIAWDVLVVDEAHRLKNSASRLNVVLKD-YTFESSLLLTGTPLQNNTEELWTLLNLVDEPKFRDQQGFVEKYGDLQEAEDVSELQEAIKPYLLRRMKEGVEKAVPPKEEIIIEVELTEIQKQYYRAIYDRNTTFLLQGKKQAKDAPSLMNLAMQLRKCCNHPFLITGVEDDV---SQQLGGNKTS-KEHLVKHSGKLVLLDKLLPRLKTQGHRVLLFSQFKIMLDILEDYLIASDISYGRIDGDIQGRQRQKEIDSFQAPDSDMLVMLLSTRAGGVGITLTAADTCIIYDSDWNPQNDVQAQARCHRIGQTKSVK 859          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|1173958328|gb|OQS04706.1| (chromodomain protein [Thraustotheca clavata])

HSP 1 Score: 501.901 bits (1291), Expect = 2.502e-158
Identity = 248/425 (58.35%), Postives = 304/425 (71.53%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ----------------KFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSD--ADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKTVQTV +++ L + E L GP+++IAPLSTL HW REF  WTDL  IVYHG+ EDR +  +YE+  P                 +F+VLITT EMC+ +D S L  + W ++ VDEAHRLKN  S+L+  L   + Y + LLLTGTPLQN++ EL+ LL F+D   FS  E F   YGNL+D   +  LQ  +RP+LLRRMKEDVE  L PKEETII+VELT +QKQYYRAIYE+N EFL+ G K  + PSLMN+ MELRKCCNHP+L +G E    + A+      T D   + LVQ  GKL+LLDKLLPRL+  GHRVL+FSQFKIMLDILEDYL  R++S  RIDG++TG  RQ  +D F +P S  F+MLLSTRAGGVGINLT+ADT II+DSDWNPQND+QAQARCHRIGQ K+V+
Sbjct:  364 MGLGKTVQTVTYINHLVTVENLRGPYIIIAPLSTLMHWQREFNNWTDLNAIVYHGNQEDRRILEEYEFYLPHPNDKAPGDKKKKKITYRFEVLITTYEMCVGSDCSKLSKIPWQVMAVDEAHRLKNRKSKLASMLLANYTYKNLLLLTGTPLQNNIEELWTLLHFLDGDKFSSQEDFVEEYGNLKDSEQVEKLQAELRPFLLRRMKEDVETSLAPKEETIIEVELTVLQKQYYRAIYERNTEFLVRGNKKSNMPSLMNIVMELRKCCNHPYLIQGAEDRELARAQKENPNMTRDELQEQLVQSCGKLILLDKLLPRLREQGHRVLIFSQFKIMLDILEDYLRIRRYSHERIDGSITGNSRQAAIDRFCEPNSSSFIMLLSTRAGGVGINLTAADTCIIYDSDWNPQNDLQAQARCHRIGQTKSVK 788          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|299471324|emb|CBN79280.1| (CHROMODOMAIN HELICASE DNA BINDING [Ectocarpus siliculosus])

HSP 1 Score: 500.745 bits (1288), Expect = 2.613e-157
Identity = 248/428 (57.94%), Postives = 310/428 (72.43%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ------------------KFQVLITTPEMCLAADASFLM--DLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRK-AVDGPSLMNLCMELRKCCNHPFLNKGVELDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKT+QTV F+  L +     GPFLVIAPLST+ HW REF  W+D+ TIV+HG  +DR +  +YE  F +                  K  V++TTPE+C+  + S L+   + W  LVVDEAHRLK++ S+L++ L+E F + S LLLTGTPLQN+  EL+ LL+ VD   F + ++F   YG+LQ    ++ LQE I+PYLLRRMKEDVEK +PPKEETII+VELT +QKQYYRAIYE+N  FLL G+K A DGPSLMNL M+LRKCCNHP+L  GVE  +R     +G+    D + LV++SGKLVLLDKLLPRL+  GHRVLLFSQFKIML+ILEDYL      +GRIDG++ G  RQ+ +D FQ P S +FVMLLST+AGGVGI LT+ADT II+DSDWNPQND+QAQARCHRIGQ K+V+
Sbjct:  847 MGLGKTLQTVTFLSILHNDYGKRGPFLVIAPLSTVTHWQREFQTWSDMNTIVFHGDQDDREILENYEMEFSEDMEKKPKDKSTIKGRRLWKSTVVVTTPELCIRKEVSSLLGRKVRWDALVVDEAHRLKSSRSKLNVVLKESFTFDSTLLLTGTPLQNNTEELWTLLNLVDAPKFRNKDQFVEDYGDLQRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEVELTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGE----DKEHLVKHSGKLVLLDKLLPRLKQQGHRVLLFSQFKIMLNILEDYLIASGIPYGRIDGSIQGNLRQKAIDSFQAPDSDMFVMLLSTKAGGVGITLTAADTCIIYDSDWNPQNDVQAQARCHRIGQTKSVK 1270          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|673015630|ref|XP_008861776.1| (hypothetical protein H310_00686 [Aphanomyces invadans] >gi|574483374|gb|ETW10365.1| hypothetical protein H310_00686 [Aphanomyces invadans])

HSP 1 Score: 492.656 bits (1267), Expect = 1.750e-155
Identity = 251/433 (57.97%), Postives = 304/433 (70.21%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ---------------KFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELD--IRSHAE------ATGK---VYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKTVQTV F++ L +KE L GP+L+IAPLSTL HW REFT WT+L  I+YHGS E R +   YE+  P                +F VLITT EMC A D   L  ++W L VVDEAHRLKN  S+LS  L++R+ Y + LLLTGTPLQN++ EL+ LL F+D   F  +  F   +G+L+D + + +L   ++P+LLRRMKEDVEK L PKEETII+VELT  QKQYYRAIYEKN EFL  G K    PSLMN+ MELRKCCNHPFL +G E    +R H E      A+ +   V+    +LLV   GKLVLLDKLLPRL+  GHRVL+FSQFKIML+ILEDYL  R +   RIDG++TG  RQ  +D +  P    FVMLLSTRAGGVGINLT+ADT II+DSDWNPQND+QAQARCHRIGQ+K+V+
Sbjct:  566 MGLGKTVQTVTFINHLATKENLRGPYLIIAPLSTLSHWQREFTGWTNLNAIIYHGSQEARKIIESYEFYRPTATSHGAKSAKDTPRYRFDVLITTFEMCTANDYLTLARIQWQLAVVDEAHRLKNKKSKLSSVLQDRYQYDNLLLLTGTPLQNNVEELWTLLHFLDAEKFQSVTAFSERFGDLKDSAQVENLHTELKPFLLRRMKEDVEKSLAPKEETIIEVELTVFQKQYYRAIYEKNSEFLARGGKKAHAPSLMNVVMELRKCCNHPFLIQGAEEREIMRLHKEQPRNLAASARREAVHKQLNELLVTSCGKLVLLDKLLPRLREGGHRVLIFSQFKIMLNILEDYLRMRGYPRERIDGSITGNDRQAAIDRYCDPQRDSFVMLLSTRAGGVGINLTAADTCIIYDSDWNPQNDLQAQARCHRIGQDKSVK 998          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|1173934210|gb|OQR85660.1| (chromodomain protein [Achlya hypogyna])

HSP 1 Score: 487.263 bits (1253), Expect = 3.055e-154
Identity = 248/428 (57.94%), Postives = 298/428 (69.63%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ------------------KFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLL-GGRKAVDGPSLMNLCMELRKCCNHPFLNKGVELD--IRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKTVQTV++++ L   E+  GP+L+IAPLSTL HW REFT WT+L  +VYHGS  +R     YE+  P                   +F VLITT EMC+AAD S L  + WT++ VDEAHRLKN  S+LS  L   F Y + LLLTGTPLQN++ EL+ LL F+D   F+  + F  A+GN+ D   + +LQ  +RP+LLRRMKEDVE  L PKEETII+VELT +QKQYYRAIYE N EFL+ G  K  + PSLMN+ MELRKCCNHPFL  G E     R   E+      +  +LLVQ  GKL+LLDKLLPRL+  GHRVL+FSQFKIMLDILEDYL  R +   RIDG++TG  RQ  +D F  P S  F+MLLSTRAGGVGINLT+ADT II+DSDWNPQND+QAQARCHRIGQ K V+
Sbjct:  369 MGLGKTVQTVSYINHLVKVEQRRGPYLIIAPLSTLAHWQREFTNWTELNAVVYHGSQAERKTIEKYEFYLPHPHDKEPGAPVANKKAPHYRFDVLITTYEMCVAADRSTLGRIPWTVVAVDEAHRLKNRKSKLSSVLLSDFTYGNLLLLTGTPLQNNVEELWTLLHFLDRNKFASQDEFTEAFGNITDVEQVENLQSELRPFLLRRMKEDVETSLAPKEETIIEVELTVLQKQYYRAIYEHNTEFLVRGNNKKANMPSLMNIVMELRKCCNHPFLILGAEAREMARVMKESPSASPEALQELLVQSCGKLILLDKLLPRLREQGHRVLVFSQFKIMLDILEDYLRLRGYPKERIDGSITGNDRQAAIDRFSDPKSKSFIMLLSTRAGGVGINLTAADTCIIYDSDWNPQNDLQAQARCHRIGQTKAVK 796          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|669162670|ref|XP_008616897.1| (hypothetical protein SDRG_12601 [Saprolegnia diclina VS20] >gi|530731351|gb|EQC29593.1| hypothetical protein SDRG_12601 [Saprolegnia diclina VS20])

HSP 1 Score: 486.878 bits (1252), Expect = 3.292e-154
Identity = 248/428 (57.94%), Postives = 302/428 (70.56%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ------------------KFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGR-KAVDGPSLMNLCMELRKCCNHPFLNKGVEL-DIRSHAEATGKVYTSD-ADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKTVQTV++++ L   E+  GP+L+IAPLSTL HW REFT WTDL  +VYHGS ++R     YE+  P                   +F VLITT EMC+A+D   L  + W ++ VDEAHRLKN  S+L+  L   F + + LLLTGTPLQN++ EL+ LL F+D   F+  E F  AYGNL D   +  LQ  +RP+LLRRMKEDVE  L PKEETII+VELT +QKQYYRAI+E+N EFL+ G  K  + PSLMN+ MELRKCCNHPFL  G E  ++    + T  V  S+  +LLVQ  GKL+LLDKLLPRL+  GHRVL+FSQFKIMLDILEDYL  R +   RIDG++TG  RQ  +D F  P SP F+MLLSTRAGGVGINLT+ADT II+DSDWNPQND+QAQARCHRIGQ K+V+
Sbjct:  381 MGLGKTVQTVSYINHLVQVEQRRGPYLIIAPLSTLAHWQREFTNWTDLNAVVYHGSHDERKTIEQYEFYLPHPLDDAPGAPVRDKKTTHYRFDVLITTYEMCVASDNITLARIPWQVVAVDEAHRLKNRKSKLASILLANFKFGNLLLLTGTPLQNNVEELWTLLHFLDRTKFASSEDFVEAYGNLVDSDQVKKLQVELRPFLLRRMKEDVETSLAPKEETIIEVELTVLQKQYYRAIFERNTEFLVRGHTKKANMPSLMNIVMELRKCCNHPFLILGAEAREVARVQKETPHVTPSELQELLVQSCGKLILLDKLLPRLKEQGHRVLIFSQFKIMLDILEDYLRLRGYVKERIDGSITGNDRQAAIDRFCNPESPAFIMLLSTRAGGVGINLTAADTCIIYDSDWNPQNDLQAQARCHRIGQTKSVK 808          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|813198690|ref|XP_012208928.1| (hypothetical protein SPRG_13475 [Saprolegnia parasitica CBS 223.65] >gi|641525925|gb|KDO20330.1| hypothetical protein SPRG_13475 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 486.108 bits (1250), Expect = 5.636e-154
Identity = 247/428 (57.71%), Postives = 298/428 (69.63%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ------------------KFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGR-KAVDGPSLMNLCMELRKCCNHPFLNKGVELD--IRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKTVQTV++++ L   E+  GP+L+IAPLSTL HW REFT WTDL  +VYHGS ++R     YE+  P                   +F VLITT EMC+A+D   L  + W ++ VDEAHRLKN  S+L+  L   F + + LLLTGTPLQN++ EL+ LL F+D + F+  E F  AYGNL D   +  LQ  +RP+LLRRMKEDVE  L PKEETII+VELT +QKQYYRAI+E+N EFL+ G  K  + PSLMN+ MELRKCCNHPFL  G E     R   E          +LLVQ  GKL+LLDKLLPRL+  GHRVL+FSQFKIMLDILEDYL  R +   RIDG++TG  RQ  +D F  P SP F+MLLSTRAGGVGINLT+ADT II+DSDWNPQND+QAQARCHRIGQ K+V+
Sbjct:  373 MGLGKTVQTVSYINHLVQVEQRRGPYLIIAPLSTLAHWQREFTNWTDLNAVVYHGSHDERKTIEQYEFYLPHPHDDAPGAPVRDKKTTHYRFDVLITTYEMCVASDNITLARIPWQVVAVDEAHRLKNRKSKLASILLANFKFGNLLLLTGTPLQNNVEELWTLLHFLDRKKFASSEEFVDAYGNLVDSDQVKKLQVELRPFLLRRMKEDVETSLAPKEETIIEVELTVLQKQYYRAIFERNTEFLVRGHTKKANMPSLMNIVMELRKCCNHPFLILGAEAREVARVQKETPHVTPLELQELLVQSCGKLILLDKLLPRLKEQGHRVLIFSQFKIMLDILEDYLRLRGYVKERIDGSITGNDRQAAIDRFCNPESPAFIMLLSTRAGGVGINLTAADTCIIYDSDWNPQNDLQAQARCHRIGQTKSVK 800          
BLAST of EWM25294.1 vs. NCBI_GenBank
Match: gi|698789024|ref|XP_009827544.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574117391|gb|ETV82873.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 484.182 bits (1245), Expect = 1.834e-152
Identity = 251/446 (56.28%), Postives = 297/446 (66.59%), Query Frame = 0
Query:    1 MGLGKTVQTVAFVHSLWSKEKLPGPFLVIAPLSTLQHWYREFTAWTDLTTIVYHGSAEDRAVCRDYEWRFPQ-------------------------KFQVLITTPEMCLAADASFLMDLEWTLLVVDEAHRLKNTHSRLSLTLRERFHYPSALLLTGTPLQNDLPELFCLLSFVDPRAFSDLERFEAAYGNLQDESSLTSLQEAIRPYLLRRMKEDVEKGLPPKEETIIDVELTGVQKQYYRAIYEKNVEFLLGGRKAVDGPSLMNLCMELRKCCNHPFLNKGVE--------------LDIRSHAEATGKVYTSDADLLVQYSGKLVLLDKLLPRLQANGHRVLLFSQFKIMLDILEDYLEGRKFSFGRIDGTVTGEKRQQQLDEFQKPASPLFVMLLSTRAGGVGINLTSADTVIIFDSDWNPQNDIQAQARCHRIGQNKNVQ 407
            MGLGKTVQTVA+++ L +KE L GP+L+IAPLSTL HW REFT WT+L  IV+HGS   R +  DYE+  P                          +F VLITT EMC A D   L  ++W L VVDEAHRLKN  S+ S  L +RF Y + LLLTGTPLQN++ EL+ LL F+D   F     F   +G L+D S +  L + ++P+LLRRMKEDVEK L PKEETII+VELT  QKQYYRAIYEKN +FL  G K    PSLMN+ MELRKCCNHPFL +G E              L + +  EA  K      DLLV   GKLVLLDKLLPRL+  GHRVL+FSQFKIML+ILEDYL  R +   RIDG++TG  RQ  +D +  P    FVMLLSTRAGGVGINLT+ADT II+DSDWNPQND+QAQARCHRIGQ K+V+
Sbjct:  571 MGLGKTVQTVAYINHLVTKENLRGPYLIIAPLSTLSHWQREFTGWTNLNAIVFHGSQSARKIIEDYEFYRPTTSSSTSKARSKGKAASSNHHQQPQYRFDVLITTFEMCTANDYLTLARIKWQLAVVDEAHRLKNKKSKFSSVLEDRFQYENLLLLTGTPLQNNVEELWTLLHFLDSDKFQSASDFVDLFGELKDSSQVEKLHKELKPFLLRRMKEDVEKSLAPKEETIIEVELTVFQKQYYRAIYEKNSQFLARGGKKAHAPSLMNVVMELRKCCNHPFLIRGAEEREVMRLQKQQPRNLPLSTRREAVHKQLN---DLLVTSCGKLVLLDKLLPRLRDGGHRVLIFSQFKIMLNILEDYLRMRGYPRERIDGSITGNDRQAAIDRYCDPHRDSFVMLLSTRAGGVGINLTAADTCIIYDSDWNPQNDLQAQARCHRIGQKKSVK 1013          
The following BLAST results are available for this feature:
BLAST of EWM25294.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107044|gb|EWM25294.1|0.000e+0100.00myb domain-containing protein [Nannochloropsis gad... [more]
gi|219120207|ref|XP_002180847.1|4.035e-17659.71predicted protein, partial [Phaeodactylum tricornu... [more]
gi|299115203|emb|CBN74034.1|8.140e-15958.47conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173958328|gb|OQS04706.1|2.502e-15858.35chromodomain protein [Thraustotheca clavata][more]
gi|299471324|emb|CBN79280.1|2.613e-15757.94CHROMODOMAIN HELICASE DNA BINDING [Ectocarpus sili... [more]
gi|673015630|ref|XP_008861776.1|1.750e-15557.97hypothetical protein H310_00686 [Aphanomyces invad... [more]
gi|1173934210|gb|OQR85660.1|3.055e-15457.94chromodomain protein [Achlya hypogyna][more]
gi|669162670|ref|XP_008616897.1|3.292e-15457.94hypothetical protein SDRG_12601 [Saprolegnia dicli... [more]
gi|813198690|ref|XP_012208928.1|5.636e-15457.71hypothetical protein SPRG_13475 [Saprolegnia paras... [more]
gi|698789024|ref|XP_009827544.1|1.834e-15256.28hypothetical protein, variant [Aphanomyces astaci]... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5390rna5390Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications