EWM30139.1, cds537 (CDS) Nannochloropsis gaditana

Overview
NameEWM30139.1
Unique Namecds537
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1343824..1344313 -
Alignment locationCM002455.1:1343463..1343653 -
Alignment locationCM002455.1:1343053..1343250 -
Alignment locationCM002455.1:1342323..1342901 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30139.1
Productdna replication licensing factor mcm3
Orig transcript idgnl|cribi|Naga_100746g3.8493.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1343824..1344313 -
CM002455.1supercontigCM002455.1:1343463..1343653 -
CM002455.1supercontigCM002455.1:1343053..1343250 -
CM002455.1supercontigCM002455.1:1342323..1342901 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003678DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006260DNA replication
GO:0006270DNA replication initiation
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042555MCM complex
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001208MCM_DNA-dep_ATPase
IPR008046Mcm3
Homology
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|585112793|gb|EWM30139.1| (dna replication licensing factor mcm3 [Nannochloropsis gaditana])

HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0
Identity = 485/485 (100.00%), Postives = 485/485 (100.00%), Query Frame = 0
Query:    1 MEQQTVTIAKVRVDGSHSSHSYTRTGMVLLREQSEVRRDRVAGRDWQKEQRQQERLNHRHCFPRRICSIFRRPSPCFRMLNPSFLPSLLPSPPLQAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 485
            MEQQTVTIAKVRVDGSHSSHSYTRTGMVLLREQSEVRRDRVAGRDWQKEQRQQERLNHRHCFPRRICSIFRRPSPCFRMLNPSFLPSLLPSPPLQAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS
Sbjct:    1 MEQQTVTIAKVRVDGSHSSHSYTRTGMVLLREQSEVRRDRVAGRDWQKEQRQQERLNHRHCFPRRICSIFRRPSPCFRMLNPSFLPSLLPSPPLQAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 485          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|585112792|gb|EWM30138.1| (dna replication licensing factor mcm3 [Nannochloropsis gaditana])

HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 485
            +AGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS
Sbjct:   10 KAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 400          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|298710225|emb|CBJ26300.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 243.817 bits (621), Expect = 1.434e-68
Identity = 121/226 (53.54%), Postives = 165/226 (73.01%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQ-ERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHE 319
            +AGIHASLNARCSV+AAANPVYGQY K +  QEN+GLPDSLLSRFDLLFVVLDQ+D   DRAI+EHV+R H +R+PG+DM PE+L+    + +   E  +   E  +VWE  +PL+ R  R        +  E+++ + FL+K++ Y+K RI P LT +A + IA+ Y++LRSKQ   R++P+T R+LETLIRL++AHAK RLS+++   D  +AM L++FALYHE
Sbjct:  454 KAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQLDAENDRAISEHVLRGHRFRKPGSDMEPEQLNGSSAEAAGEQEQTESPEEAAQVWEKHHPLL-RASR--------NTHEELVCQKFLKKFLHYSKHRIHPELTEDAREHIASAYASLRSKQGNNRSLPVTARSLETLIRLASAHAKARLSHKVEEADAAKAMNLMSFALYHE 670          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|565400076|ref|XP_006365559.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 [Solanum tuberosum])

HSP 1 Score: 239.965 bits (611), Expect = 2.600e-67
Identity = 162/405 (40.00%), Postives = 212/405 (52.35%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRS-----KQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 483
            +AGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS     K    T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       G N    R+RRA+  +G     DE  D E G         G G    S A +    P  E        L   SAAL       H + LP+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  432 KAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASTNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEVALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSADHDGGNNASARKRRAEHDAG-----DESADHEAG---------GVGG---SEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQLPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 787          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|970011076|ref|XP_015066441.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X1 [Solanum pennellii])

HSP 1 Score: 239.195 bits (609), Expect = 5.550e-67
Identity = 160/405 (39.51%), Postives = 211/405 (52.10%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 483
            +AGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       G N    R+RRA+  +G     DE  D E G         G G    S A +    P  E        L   SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  432 KAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAG-----DESADHEAG---------GVGG---SEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 787          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|970011078|ref|XP_015066443.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X2 [Solanum pennellii])

HSP 1 Score: 238.424 bits (607), Expect = 1.017e-66
Identity = 158/405 (39.01%), Postives = 210/405 (51.85%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 483
            +AGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       G N    R+RRA+  +G     DE  D E G    A           S +P+  QA                SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  432 KAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAG-----DESADHEAGGVGEAMETDDTPAAEISTSPERLQA---------------FSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 785          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|723675729|ref|XP_010316920.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X2 [Solanum lycopersicum])

HSP 1 Score: 238.039 bits (606), Expect = 1.381e-66
Identity = 160/406 (39.41%), Postives = 210/406 (51.72%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK-------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 483
            +AGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       GG+N   R+RR    A       DE  D E G         G G    S A +    P  E        L   SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  432 KAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAD------DESADHEAG---------GVGG---SEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 787          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|470413633|ref|XP_004336600.1| (DNA replication licensing factor mcm3, putative, partial [Acanthamoeba castellanii str. Neff] >gi|440793402|gb|ELR14587.1| DNA replication licensing factor mcm3, putative, partial [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 238.424 bits (607), Expect = 1.610e-66
Identity = 130/285 (45.61%), Postives = 173/285 (60.70%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPG-TDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDE 378
            +AGIH SLNARCSVLAAANP YGQY++ +   EN+ LPDSLLSRFDLLF+VLD+++P  DR+I EHV+R+H YR PG  +  P  +S G  DL S L   ++ + E  +++  NPL       R + E   E+  + T  F++KYI YAK+R QP+L  +AED IA  Y+ LR K + RT P+T RTLETLIRLS AHAK RLS+E+TR+D E A+ L+ +ALYHE                                   +PR ++ A +  G + G  EEED+
Sbjct:  392 KAGIHTSLNARCSVLAAANPAYGQYNRHKKPSENIRLPDSLLSRFDLLFIVLDELNPAHDRSITEHVLRSHMYRPPGELEGTPLDMSDGHHDLMSELSAHREDVVETPMFQKHNPL------HRRKKEGGEEKRQLYTMEFIKKYIIYAKNRFQPQLMDDAEDYIAEEYTKLRGKMDVRTQPVTARTLETLIRLSAAHAKCRLSHEVTREDAEAAVALVNYALYHE----------------------------------AQPRAKQAATKGQGQTAGGQEEEDQ 636          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|723675732|ref|XP_010316921.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X3 [Solanum lycopersicum])

HSP 1 Score: 237.269 bits (604), Expect = 2.480e-66
Identity = 158/406 (38.92%), Postives = 209/406 (51.48%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK-------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 483
            +AGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       GG+N   R+RR    A       DE  D E G    A           S +P+  QA                SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  432 KAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAD------DESADHEAGGVGEAMETDDTPAAEISTSPERLQA---------------FSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 785          
BLAST of EWM30139.1 vs. NCBI_GenBank
Match: gi|460374616|ref|XP_004233106.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X1 [Solanum lycopersicum])

HSP 1 Score: 237.269 bits (604), Expect = 3.167e-66
Identity = 159/406 (39.16%), Postives = 210/406 (51.72%), Query Frame = 0
Query:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK-------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 483
            +AGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       GG+N   R+RR    A       DE  D E G         G   +  S A +    P  E        L   SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  432 KAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAD------DESADHEAG-------GVGVLLESGSEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 792          
The following BLAST results are available for this feature:
BLAST of EWM30139.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112793|gb|EWM30139.1|0.000e+0100.00dna replication licensing factor mcm3 [Nannochloro... [more]
gi|585112792|gb|EWM30138.1|0.000e+099.74dna replication licensing factor mcm3 [Nannochloro... [more]
gi|298710225|emb|CBJ26300.1|1.434e-6853.54conserved unknown protein [Ectocarpus siliculosus][more]
gi|565400076|ref|XP_006365559.1|2.600e-6740.00PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|970011076|ref|XP_015066441.1|5.550e-6739.51PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|970011078|ref|XP_015066443.1|1.017e-6639.01PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|723675729|ref|XP_010316920.1|1.381e-6639.41PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|470413633|ref|XP_004336600.1|1.610e-6645.61DNA replication licensing factor mcm3, putative, p... [more]
gi|723675732|ref|XP_010316921.1|2.480e-6638.92PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|460374616|ref|XP_004233106.1|3.167e-6639.16PREDICTED: DNA replication licensing factor MCM3 h... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna537rna537Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications