EWM30138.1, cds536 (CDS) Nannochloropsis gaditana

Overview
NameEWM30138.1
Unique Namecds536
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1344284..1344313 -
Alignment locationCM002455.1:1343824..1344028 -
Alignment locationCM002455.1:1343463..1343653 -
Alignment locationCM002455.1:1343053..1343250 -
Alignment locationCM002455.1:1342323..1342901 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30138.1
Productdna replication licensing factor mcm3
Orig transcript idgnl|cribi|Naga_100746g3.8492.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1344284..1344313 -
CM002455.1supercontigCM002455.1:1343824..1344028 -
CM002455.1supercontigCM002455.1:1343463..1343653 -
CM002455.1supercontigCM002455.1:1343053..1343250 -
CM002455.1supercontigCM002455.1:1342323..1342901 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003678DNA helicase activity
GO:0003677DNA binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006270DNA replication initiation
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042555MCM complex
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR008046Mcm3
IPR001208MCM_DNA-dep_ATPase
Homology
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|585112792|gb|EWM30138.1| (dna replication licensing factor mcm3 [Nannochloropsis gaditana])

HSP 1 Score: 810.831 bits (2093), Expect = 0.000e+0
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 400
            MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS
Sbjct:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 400          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|585112793|gb|EWM30139.1| (dna replication licensing factor mcm3 [Nannochloropsis gaditana])

HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0
Query:   10 KAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 400
            +AGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS
Sbjct:   95 QAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAALQSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIYTS 485          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|298710225|emb|CBJ26300.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 263.848 bits (673), Expect = 4.638e-77
Identity = 131/235 (55.74%), Postives = 174/235 (74.04%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQ-ERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHE 234
            MEQQTVTIAKAGIHASLNARCSV+AAANPVYGQY K +  QEN+GLPDSLLSRFDLLFVVLDQ+D   DRAI+EHV+R H +R+PG+DM PE+L+    + +   E  +   E  +VWE  +PL+ R  R        +  E+++ + FL+K++ Y+K RI P LT +A + IA+ Y++LRSKQ   R++P+T R+LETLIRL++AHAK RLS+++   D  +AM L++FALYHE
Sbjct:  445 MEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQLDAENDRAISEHVLRGHRFRKPGSDMEPEQLNGSSAEAAGEQEQTESPEEAAQVWEKHHPLL-RASR--------NTHEELVCQKFLKKFLHYSKHRIHPELTEDAREHIASAYASLRSKQGNNRSLPVTARSLETLIRLASAHAKARLSHKVEEADAAKAMNLMSFALYHE 670          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|565400076|ref|XP_006365559.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 [Solanum tuberosum])

HSP 1 Score: 258.84 bits (660), Expect = 2.193e-75
Identity = 171/414 (41.30%), Postives = 220/414 (53.14%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 398
            MEQQTVTIAKAGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       G N    R+RRA+  +G     DE  D E G         G G    S A +    P  E        L   SAAL       H + LP+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  423 MEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASTNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEVALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSADHDGGNNASARKRRAEHDAG-----DESADHEAG---------GVGG---SEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQLPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 787          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|970011076|ref|XP_015066441.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X1 [Solanum pennellii])

HSP 1 Score: 258.455 bits (659), Expect = 3.361e-75
Identity = 170/414 (41.06%), Postives = 220/414 (53.14%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 398
            MEQQTVTIAKAGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       G N    R+RRA+  +G     DE  D E G         G G    S A +    P  E        L   SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  423 MEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAG-----DESADHEAG---------GVGG---SEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 787          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|970011078|ref|XP_015066443.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X2 [Solanum pennellii])

HSP 1 Score: 257.684 bits (657), Expect = 6.459e-75
Identity = 168/414 (40.58%), Postives = 219/414 (52.90%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 398
            MEQQTVTIAKAGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       G N    R+RRA+  +G     DE  D E G    A           S +P+  QA                SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  423 MEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAG-----DESADHEAGGVGEAMETDDTPAAEISTSPERLQA---------------FSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 785          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|723675729|ref|XP_010316920.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X2 [Solanum lycopersicum])

HSP 1 Score: 256.914 bits (655), Expect = 1.013e-74
Identity = 170/415 (40.96%), Postives = 219/415 (52.77%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK-------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 398
            MEQQTVTIAKAGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       GG+N   R+RR    A       DE  D E G         G G    S A +    P  E        L   SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  423 MEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAD------DESADHEAG---------GVGG---SEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 787          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|723675732|ref|XP_010316921.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X3 [Solanum lycopersicum])

HSP 1 Score: 256.144 bits (653), Expect = 1.886e-74
Identity = 168/415 (40.48%), Postives = 218/415 (52.53%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK-------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 398
            MEQQTVTIAKAGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       GG+N   R+RR    A       DE  D E G    A           S +P+  QA                SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  423 MEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAD------DESADHEAGGVGEAMETDDTPAAEISTSPERLQA---------------FSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 785          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|470413633|ref|XP_004336600.1| (DNA replication licensing factor mcm3, putative, partial [Acanthamoeba castellanii str. Neff] >gi|440793402|gb|ELR14587.1| DNA replication licensing factor mcm3, putative, partial [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 256.529 bits (654), Expect = 2.125e-74
Identity = 141/306 (46.08%), Postives = 187/306 (61.11%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPG-TDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGKGGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHK 305
            MEQQ+VTIAKAGIH SLNARCSVLAAANP YGQY++ +   EN+ LPDSLLSRFDLLF+VLD+++P  DR+I EHV+R+H YR PG  +  P  +S G  DL S L   ++ + E  +++  NPL       R + E   E+  + T  F++KYI YAK+R QP+L  +AED IA  Y+ LR K + RT P+T RTLETLIRLS AHAK RLS+E+TR+D E A+ L+ +ALYHE                                   +PR ++ A +  G + G  EEED+     +  +P+K
Sbjct:  383 MEQQSVTIAKAGIHTSLNARCSVLAAANPAYGQYNRHKKPSENIRLPDSLLSRFDLLFIVLDELNPAHDRSITEHVLRSHMYRPPGELEGTPLDMSDGHHDLMSELSAHREDVVETPMFQKHNPL------HRRKKEGGEEKRQLYTMEFIKKYIIYAKNRFQPQLMDDAEDYIAEEYTKLRGKMDVRTQPVTARTLETLIRLSAAHAKCRLSHEVTREDAEAAVALVNYALYHE----------------------------------AQPRAKQAATKGQGQTAGGQEEEDQH--STKAVAPNK 646          
BLAST of EWM30138.1 vs. NCBI_GenBank
Match: gi|460374616|ref|XP_004233106.1| (PREDICTED: DNA replication licensing factor MCM3 homolog 2 isoform X1 [Solanum lycopersicum])

HSP 1 Score: 256.144 bits (653), Expect = 2.301e-74
Identity = 170/415 (40.96%), Postives = 220/415 (53.01%), Query Frame = 0
Query:    1 MEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYHKARTVQENVGLPDSLLSRFDLLFVVLDQIDPGTDRAIAEHVIRAHSYRRPGTDMAPERLSSGPLDLSSSLEDDKDSLEEHRVWEDVNPLVARGERERGRGEPASEEEDILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERR-----TVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALYHEGNEPPGRLPPSVRLTEEEEEEGEGGGEEGK-------GGSNGRPRRRRRADRASGMSEGTDEEEDEEEGEDEGASPHKGAGKKPRSRAPKEGQAPGKEEEVRESFFLSRLSAAL-----QSHGDGLPLAQFVEILNEGLEGREGMPAFSEKEVLARVVAEDENGKCFWEDNAQVIY 398
            MEQQTVTIAKAGIHASLNARCSV+AAANP+YG Y ++ T  +N+GLPDSLLSRFDLLF+VLDQ+DPG DR I+EHV+R H YR              P+D  SS  D+    EE    +++   V       GR    S ++D LT  FL+ YI YAK+RI P LT EA D IA  Y+ LRS          T+PIT RTLET+IRLSTAHAK++L  ++ + D E A+++L FA+YH+             LTE EE E E   E GK       GG+N   R+RR    A       DE  D E G   G     G   +  S A +    P  E        L   SAAL       H + +P+A    ++N G         +S+ E+   +   +E G+ +   +  V+Y
Sbjct:  423 MEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYR-------------SPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRS-KKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQ------------ELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDAD------DESADHEAG---GV----GVLLESGSEAMETDDTPAAEISTSPE-RLQAFSAALGRHRNLQHVEQIPVADVENVVNNG-----ATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVY 792          
The following BLAST results are available for this feature:
BLAST of EWM30138.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112792|gb|EWM30138.1|0.000e+0100.00dna replication licensing factor mcm3 [Nannochloro... [more]
gi|585112793|gb|EWM30139.1|0.000e+099.74dna replication licensing factor mcm3 [Nannochloro... [more]
gi|298710225|emb|CBJ26300.1|4.638e-7755.74conserved unknown protein [Ectocarpus siliculosus][more]
gi|565400076|ref|XP_006365559.1|2.193e-7541.30PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|970011076|ref|XP_015066441.1|3.361e-7541.06PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|970011078|ref|XP_015066443.1|6.459e-7540.58PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|723675729|ref|XP_010316920.1|1.013e-7440.96PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|723675732|ref|XP_010316921.1|1.886e-7440.48PREDICTED: DNA replication licensing factor MCM3 h... [more]
gi|470413633|ref|XP_004336600.1|2.125e-7446.08DNA replication licensing factor mcm3, putative, p... [more]
gi|460374616|ref|XP_004233106.1|2.301e-7440.96PREDICTED: DNA replication licensing factor MCM3 h... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna536rna536Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications