EWM25331.1, cds5343 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|585107090|gb|EWM25331.1| (putative lactoylglutathione chloroplast-like protein [Nannochloropsis gaditana]) HSP 1 Score: 820.846 bits (2119), Expect = 0.000e+0 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0 Query: 1 MPGGRNAWSAALIVAVSCMYPMTESFFYSTRVMTRSATISMQSDVVEDNENVENGVPNCRKLKFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAGE 403 MPGGRNAWSAALIVAVSCMYPMTESFFYSTRVMTRSATISMQSDVVEDNENVENGVPNCRKLKFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAGE Sbjct: 1 MPGGRNAWSAALIVAVSCMYPMTESFFYSTRVMTRSATISMQSDVVEDNENVENGVPNCRKLKFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAGE 403
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|553187334|ref|XP_005854587.1| (hypothetical protein NGA_0175600 [Nannochloropsis gaditana CCMP526] >gi|422294468|gb|EKU21768.1| hypothetical protein NGA_0175600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 732.25 bits (1889), Expect = 0.000e+0 Identity = 360/363 (99.17%), Postives = 361/363 (99.45%), Query Frame = 0 Query: 41 MQSDVVEDNENVENGVPNCRKLKFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAGE 403 MQSDVVEDNENVENGVPNCRKLKFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEW SNPRF QHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDV+FAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAGE Sbjct: 1 MQSDVVEDNENVENGVPNCRKLKFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVRFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAGE 363
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|873238960|emb|CEL95464.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 256.144 bits (653), Expect = 3.031e-79 Identity = 149/311 (47.91%), Postives = 195/311 (62.70%), Query Frame = 0 Query: 101 IGELPEWVSNPRFAQHLVINVPDMAAALSFYMDGLQMHVLRSRL--VGGQNSTFVGYGPETL---KTPKAWYPGVSSFSMYGAHFVLELNEV-----LKTEEGDT-PVL---DPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRI-PESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAG-VRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKEL 395 +G LPE + R+ QH V+NVP M AL+FY GL M V+R+R N TFVGYGPETL + + PG+SS++ YGAHF LEL E LK+++ D PV+ +PGN V +LQ+A+P LR+S+LAE GG I+ AYGW+ VD+PGGL ++I+G RRDP M V D+ A FY LGMRE PY +R P+S EPKQP+ S ++ +SED FG+LL+ KK AK + +G V DKLAIL +VV +G + ++ F G PGIGT VA D G G+VLVE +D EKEL Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPS-------LNAGFTGPVPGIGTNVAAFKD-AQGYGLVLVEYDDFEKEL 303
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|299117597|emb|CBN75439.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 218.394 bits (555), Expect = 1.580e-63 Identity = 135/308 (43.83%), Postives = 189/308 (61.36%), Query Frame = 0 Query: 95 PNAANAIGELPEWVSNPRFAQHLVINVPDMAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELN----EVLKTEEGDTPV---LDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKEL 395 P+AA AIG+L E+ RFAQH + VPDMAAAL FY+DG+ M V+R+R N+T VG+GPE L+ P ++ GVSS + YG HF LELN E E+G+ V DPGN V +LQ+AV S R+S++ +AGG I+S YG++ V +PGGLR +++ G RRDP M LA+ V D++++ +Y + GM + P+P +R S +EP+QP GS F+A+ + FG++L+P K + + G VV +A+L DV + K S VD A G G VAV DP G GV VE +D +L Sbjct: 111 PSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQ---INPGSVV-SVAVLAEDVEKIAESLGGKVS-VD-----SARGGGKSVAVA-DP-DGYGVKFVEYSDWRGQL 406
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|1072230254|gb|OEU14987.1| (hypothetical protein FRACYDRAFT_208602 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 156.377 bits (394), Expect = 9.394e-41 Identity = 111/310 (35.81%), Postives = 161/310 (51.94%), Query Frame = 0 Query: 72 QRVTVATTAGILGSSITGAFPSCPN-AANAIGELPEWVSNPRFAQHLVINVPD---MAAALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTE-----EGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPE--SIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAIL---GTDVVGKGGAEDWKA---SGVDVKFAGEA 364 +R +A + + S A P ++ A+G LPE V++ + Q L INV D ++F +DG VLR R T++G+GPE L P + VSSFS YG H + + +++ +GD PGN +AYLQL VP R+S++ E G I AYG V V SP GL + IVG+ DPIM +A+N +VQ++ FY N LG EQ P SR + +++EP PKGS +++ S G+LLLP KK+ + V+ L I+ + G ++ + SGV V F EA Sbjct: 15 RREMIAKSTALASVSFLPALLGSPRISSAAVGSLPELVNSNAYVQGLTINVADSVQQKQMVAFLVDGFSFEVLRQRNQDTIEETWLGFGPEQLSVPDDFELPVSSFSKYGGHASINIRYDYESKAPLYRQGDDA---PGNNIAYLQLGVPGYRISQMVENAGNILDAYGLVNVVSPSGLPIRGIVGISPDPIMFVAVNCKNVQESKEFYEN-LGFVEQEVPYSRPSKGTTMFEPAPPKGSCYMSPSPTSMGVLLLPGKKKKT---ITANPAVNSLNIVYNPSSSETSSGEDKEIRVKDPSGVTVNFQSEA 317
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|1210526079|dbj|GAX14997.1| (hypothetical protein FisN_12Lh306 [Fistulifera solaris]) HSP 1 Score: 148.673 bits (374), Expect = 7.221e-38 Identity = 95/267 (35.58%), Postives = 149/267 (55.81%), Query Frame = 0 Query: 72 QRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMA---AALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLEL-------NEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESI--YEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGV 326 +R + +TA L +S+ A PS A+G LPE+ ++ Q + I V D + + + F +G + VLR R+ G T++G+GPE L P ++ P VSS + YG H + + N + + GD+ PG+ +AYLQL VP R+S++ ++GG I AYG+V V SP GL + IVG+ DPIM +A+ V+++ FY LG EQ YP +R + + +EP QP S ++A S + G+LLLP K++ + + Sbjct: 23 RRQFITSTAAGLTASV--ALPSI----AAVGTLPEFANDNAILQGITIKVADQSQLDSMIQFLENGFECQVLRRRIRGPIEETWMGFGPEQLSIPDSFQPPVSSLASYGGHASIHIVYDKTITNPLYRV--GDS--TPPGDNIAYLQLGVPEYRISQMVKSGGTILDAYGYVNVISPSGLPIRGIVGLVPDPIMFVAIRCASVEESRAFY-QQLGFVEQEYPYARPSKGMGQFEPPQPAKSVYMAPSANCMGVLLLPTQKRKKQPTI 278
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|1210517472|dbj|GAX23729.1| (hypothetical protein FisN_12Hh306 [Fistulifera solaris]) HSP 1 Score: 144.05 bits (362), Expect = 4.581e-36 Identity = 86/239 (35.98%), Postives = 135/239 (56.49%), Query Frame = 0 Query: 100 AIGELPEWVSNPRFAQHLVINVPDMA---AALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLEL-------NEVLKTEEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESI--YEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGV 326 A+G LP++ ++ Q + I V D + + + F +G + VLR R+ G T++G+GPE L P + P VSS + YG H + + N + + GD+ PG +AYLQL VP R+S++ ++GG I AYG+V V SP GL + IVG+ DPIM +A+ +V+++ FY LG EQ YP +R + + +EP QP S ++A S + G+LLLP K++ + + Sbjct: 45 AVGTLPDFANDNAILQGITIKVADQSQLDSMIQFLENGFECQVLRRRIRGPIEETWMGFGPEQLSIPDDFQPPVSSLASYGGHASIHIVYDKSITNPLYRV--GDS--TPPGENIAYLQLGVPEYRISQMVKSGGNILDAYGYVNVISPSGLPIRGIVGLVPDPIMFVAIRCTNVEESRAFY-QQLGFVEQEYPYARPSKGMGQFEPPQPAKSVYMAPSANCMGVLLLPTQKRKKQPTI 278
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|219122805|ref|XP_002181729.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407005|gb|EEC46943.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 149.058 bits (375), Expect = 1.861e-35 Identity = 101/270 (37.41%), Postives = 148/270 (54.81%), Query Frame = 0 Query: 67 RQGLLQRVTVATTAGILGSSITGAFPSCPNAANAI-GELPEWVSNPRFAQHLVINVPDMA---AALSFYMDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNEVLKTEEGDTPVLD-----PGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIPESI--YEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAG 325 R LLQ TV+ +G G +++G+ P++A A+ G LPE+ + Q + I V D + A + F D VLR R+ G T++GYGPE L+ P + VSSF+ YG H + L + + P+ PG A+LQ+AVP R+S++ + GG I AYG+V V SP GL + IVG+ DPIM +A+N DV+ + FY LG ++Q YP +R + +EP QP S ++A S + G+LLLP KK +A Sbjct: 388 RDFLLQ--TVSLLSG--GVALSGS----PDSATAVVGALPEFADSNAILQGVTIKVADQSQQEAMVLFLKDSFDFEVLRRRVQGSIEETWLGYGPEQLRIPDDFTLPVSSFNTYGGHASVRL---VYDAKATVPLYRTGEKAPGENFAFLQVAVPGYRISQMVKHGGNIIDAYGFVNVVSPSGLPMRGIVGITPDPIMFVAINCIDVKASQAFY-EKLGFQKQEYPYARPSKGTGPFEPAQPSKSVYMAPSANCMGLLLLPSKKKRLQAN 645
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|224005567|ref|XP_002291744.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972263|gb|EED90595.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 142.124 bits (357), Expect = 1.823e-34 Identity = 118/357 (33.05%), Postives = 169/357 (47.34%), Query Frame = 0 Query: 67 RQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMAA---ALSFYMDGLQ-MHVLRSRLVGGQ-----NSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELNE-------VLKTEEGD---TPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIP--ESIYEPKQPKGSRFLAFSEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTNDPVTGLGVVLVEANDLEKELVGTVSAG 402 R+ +L+ + TT IL + I P A AIG +PE+ Q + I+V D + F+ +G VLR R GG ++G+GPET P ++ VS+FS YG H + L + K G+ P PG+ +AYLQL VP R+S++ + GG + AYGWV V SP GL + IVG+R DPIM LALN DV K+ FY LG Q +P +R + +EP QP S ++A S + GILLL + R +V + +VV D +G+A + + A DP + + + + N LEKE+ T S G Sbjct: 94 RRSILKNTLLTTTCAILSTQILSNQP----ANAAIGTIPEFADTNAIFQSVTIDVTDKKQFDDTVEFFTNGFDGCKVLRER--GGDGGGVVKEVWLGFGPETPNIPPSFTLPVSAFSEYGGHSSIHLRYDPFATTLLYKRSSGEFNNEPA--PGDNIAYLQLGVPQYRISQMVKYGGNVIDAYGWVNVVSPAGLPVRSIVGIRPDPIMFLALNCVDVTKSEEFYAK-LGFVRQEFPYARPNQGQGQFEPPQPPKSVYVAPSPNSMGILLL-------QNKNRRKAIVPNPVLRSVNVVYAPPDGD----------SGDAVNLDPQTA---DP-SSVPISFIPQNYLEKEIKTTSSPG 420
BLAST of EWM25331.1 vs. NCBI_GenBank
Match: gi|397640118|gb|EJK73944.1| (hypothetical protein THAOC_04413 [Thalassiosira oceanica]) HSP 1 Score: 137.502 bits (345), Expect = 1.260e-31 Identity = 96/256 (37.50%), Postives = 135/256 (52.73%), Query Frame = 0 Query: 63 KFIDRQGLLQRVTVATTAGILGSSITGAFPSCPNAANAIGELPEWVSNPRFAQHLVINVPDMAA---ALSFY---MDGLQMHVLRSRLVGGQNSTFVGYGPETLKTPKAWYPGVSSFSMYGAHFVLELN-EVLKT---------EEGDTPVLDPGNAVAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASGFYVNALGMREQPYPLSRIP--ESIYEPKQPKGS 300 K R+ +L + +AT A + S + PS +A+ A+G LPE+ Q L I+V D ++F+ DG+++ R+ GG T++G+GPETL TP + VSSF+MYG H + L + T E + P PG+++AYLQL VP R+SK+ E GG + YGWV P GL + IVG+R DPIM LA+N DV + FY LG Q YP +R + +EP QPK S Sbjct: 59 KLQSRRSILHQC-LATGAALSASQL---LPS--SASAALGTLPEFADTNAILQSLTIDVTDKQQYDDTIAFFTSAFDGMKIMRQRNNNGGGIKDTWLGFGPETLSTPPDFQLPVSSFAMYGGHASIHLRYDPFATAPLYKRSFGEFNNEPA--PGDSIAYLQLGVPQYRISKMVETGGNVIDGYGWVNAVCPAGLPIRSIVGIRPDPIMFLAVNCQDVATSEEFYAK-LGFVRQEYPYARPNQGQGQFEPPQPKKS 305 The following BLAST results are available for this feature:
BLAST of EWM25331.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|