EWM25420.1, cds5325 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|585107181|gb|EWM25420.1| (s-adenosylmethionine mitochondrial carrier [Nannochloropsis gaditana]) HSP 1 Score: 903.664 bits (2334), Expect = 0.000e+0 Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query: 1 MPSSIIIYHTGMKYDAFPLLLGLVVFTVMDLSVAFISPSAEKVREAPKCNSHFRVRQIPISAPLKGHRHSNNLDISKDYFVKIRNKSADVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKGSKK 444
MPSSIIIYHTGMKYDAFPLLLGLVVFTVMDLSVAFISPSAEKVREAPKCNSHFRVRQIPISAPLKGHRHSNNLDISKDYFVKIRNKSADVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKGSKK
Sbjct: 1 MPSSIIIYHTGMKYDAFPLLLGLVVFTVMDLSVAFISPSAEKVREAPKCNSHFRVRQIPISAPLKGHRHSNNLDISKDYFVKIRNKSADVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKGSKK 444
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|553191077|ref|XP_005855316.1| (s-adenosylmethionine mitochondrial carrier protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293744|gb|EKU21044.1| s-adenosylmethionine mitochondrial carrier protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0 Identity = 429/435 (98.62%), Postives = 432/435 (99.31%), Query Frame = 0
Query: 10 TGMKYDAFPLLLGLVVFTVMDLSVAFISPSAEKVREAPKCNSHFRVRQIPISAPLKGHRHSNNLDISKDYFVKIRNKSADVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKGSKK 444
TGMKYDAFPLLLGLVVF+VMDLSVAFISPSAEKVREAPKCNSHFRVRQIPISAPLK HRHSN+LDISKDYFVKIRNKSA VDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQY+KGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGK SKK
Sbjct: 1 TGMKYDAFPLLLGLVVFSVMDLSVAFISPSAEKVREAPKCNSHFRVRQIPISAPLKRHRHSNDLDISKDYFVKIRNKSAGVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYSKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAFSGKWSKK 435
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|873229243|emb|CEM13673.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 238.81 bits (608), Expect = 1.148e-70 Identity = 133/285 (46.67%), Postives = 179/285 (62.81%), Query Frame = 0
Query: 170 QEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDV-LKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALT------------------NDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKG 435
+E +SGLAGG ASR K+ LHP+DT + RLQ N+ LF +LY G+ P L+VGTPA A FF KD + LA+ + T AAV AA++PYWL+R P+EV+KT+ Q GL ++T G + V+Q+G+ GLY GY +NIAYA+PTD IKF+VY++L+ + +L LE + GS AS AQL + PLDV+RTR+MT + T +D+ S A+ + + +IA EEG A+L+SG+ PRL RA LSGAIQFGSYEL KG
Sbjct: 142 KELISGLAGGGASRLGKDAILHPLDTLRARLQLR--NQTNDGLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNL-QVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNTLDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAALGGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPASSYGGGVAAQSDSSASSSAAYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKG 423
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|298706433|emb|CBJ29429.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 237.269 bits (604), Expect = 3.229e-70 Identity = 137/272 (50.37%), Postives = 171/272 (62.87%), Query Frame = 0
Query: 175 GLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVK----QEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 437
GL GAA SK+L L+P+DT KTRLQ + + +P ELF+ LYDGV P LL G P+GA FF+ KD N G ++ E TTIAAV A PYW IR PAE+LK + Q GL S +G E K EGL GLY GY SNIAYAFP DAIKF+VY AL++S + KL+ +E++VLGS AS AQ ++TPLDVVRTR+MT A ++D V I+ EE + L++G+ PR+ R+ LSGAIQFGSYE KG F
Sbjct: 140 GLVAGAAVSTSKQLLLYPVDTVKTRLQLPQ-DGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGL-SSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT---APSDDE-----GYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLF 401
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|922868753|gb|KOO35054.1| (s-adenosylmethionine mitochondrial carrier protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 205.297 bits (521), Expect = 6.252e-59 Identity = 123/274 (44.89%), Postives = 169/274 (61.68%), Query Frame = 0
Query: 171 EFLSGLAGGAASRASKELFLHPIDTWKTRLQYA---KGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGA 436
EFLSGL G A + KE+ LHP+DT KTRLQ +G PA L+K++Y G+ PA++ G PA + FFA KD + + G+ T+AAV AN+ YWL+RNPAEV+K ++Q+G +A ++ G G YRGY SN+AYAFP D+ KFV+Y A++ ++ R KL+PLE++V G+ A+ AQ +STPLDV RTRIMT L D PA V T + +A EEG+ L++GL P++ RA +SGA+QF E K A
Sbjct: 57 EFLSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRGLLDPA-LYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDT---GGTVAAVGCANLVYWLVRNPAEVIKVRRQSGGESDSAAAATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMT----LPADQ----PAP--GVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVKDA 316
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|551590902|ref|XP_005779767.1| (hypothetical protein EMIHUDRAFT_366662, partial [Emiliania huxleyi CCMP1516] >gi|485632306|gb|EOD27338.1| hypothetical protein EMIHUDRAFT_366662, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 196.438 bits (498), Expect = 3.344e-55 Identity = 125/278 (44.96%), Postives = 169/278 (60.79%), Query Frame = 0
Query: 171 EFLSGLAGGAASRASKELFLHPIDTWKTRLQ--YAKGNEAPA------ELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREA-TTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRK-----LNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTK 434
EF SGL GA + KEL LHP+DT K RLQ A G A ELFK+ YDG+ PAL+ G PA +AFFA KD G R G + +A TT+ AV AN+ YW I+NP+EVLK ++Q G+ TAG +E + EG+ G Y N AY+ P D +KF++YE L+ S++ + L+P+E++V G+AA++ AQ ++TPLDV R RIMT +A T V T R++AAEEG L++G+ P++ RA SGAIQF +YE TK
Sbjct: 76 EFWSGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGARRAVLGELFKSPYDGLAPALISGAPAASAFFAVKD---GAKRAVAGLQLGKAETTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGAAVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTSDA--------------TGVAATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|551580011|ref|XP_005775564.1| (S-adenosylmethionine mitochondrial carrier protein [Emiliania huxleyi CCMP1516] >gi|485627508|gb|EOD23135.1| S-adenosylmethionine mitochondrial carrier protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 195.667 bits (496), Expect = 5.988e-55 Identity = 123/278 (44.24%), Postives = 168/278 (60.43%), Query Frame = 0
Query: 171 EFLSGLAGGAASRASKELFLHPIDTWKTRLQ------YAKGNEAP--AELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREA-TTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRK-----LNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTK 434
EF SGL GA + KEL LHP+DT K RLQ + G ELFK+ YDG+ PAL+ G PA +AFFA KD G R G + +A TT+ AV AN+ YW I+NP+EVLK ++Q G+ TAG +E + EG+ G Y N AY+ P D +KF++YE L+ S++ + L+P+E++V G+AA++ AQ ++TPLDV R RIMT +A T V T R++AAEEG L++G+ P++ RA SGAIQF +YE TK
Sbjct: 76 EFWSGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGGRRAVLGELFKSPYDGLAPALISGAPAASAFFAVKD---GAKRAVAGLQLGKAETTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGAAVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTSDA--------------TGVAATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|1210531314|dbj|GAX10075.1| (hypothetical protein FisN_2Lh344 [Fistulifera solaris]) HSP 1 Score: 183.726 bits (465), Expect = 1.773e-50 Identity = 118/310 (38.06%), Postives = 175/310 (56.45%), Query Frame = 0
Query: 146 PSGKAQEAPR-RDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELF------KNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEF-REATTIAAVFAANIPYWLIRNPAEVLKTQQQTGL---IDSTAGGTIEAVKQEGL----------EGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTK 434
PS +A E+ + SDT+ +++ +QE LSG+ GA+ +K L +P+DT RLQ +P +F K Y G+ LL PAGA FFA KD K + S+ + + +T AV A IPYWL+RNP+EV+KT+QQ G+ +++T A +E + EG Y GY NI YA+P D +KFV+YE Q + R + P E +++G+AA++++Q M+TPLDVVR R+M ++ S T+ T +A EG++ LF+G PR+ +A +SGAIQF +YE TK
Sbjct: 36 PSTRAVESTEPKQVSDTTLQRT--VQESLSGMVAGASLPVTKTLVKYPLDTATVRLQMPN---SPYSIFDIPNLLKGSYRGITVPLLSNIPAGAVFFAVKDATKAILATSYAGDIPKWLSTSLAVGIAQIPYWLVRNPSEVVKTRQQAGIAGYVNTTNPWEAVARVREDILNNRTNVPLWEGYYVGYWENIWYAYPADVLKFVLYE--QLAGGRPVTPAEGAMVGAAATALSQFMTTPLDVVRNRLMAQ-----TTTTEITKQSDTNYLTTLVGLAQTEGLSGLFAGAAPRVGKAMISGAIQFATYEETK 333
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|1210514379|dbj|GAX26709.1| (hypothetical protein FisN_2Hh344 [Fistulifera solaris]) HSP 1 Score: 179.104 bits (453), Expect = 8.969e-49 Identity = 125/325 (38.46%), Postives = 179/325 (55.08%), Query Frame = 0
Query: 130 TRLSLTDPALKVSRPEPSGKAQEAPRRDASDTSSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELF------KNLYDGVWPALLVGTPAGAAFFATKDVLKG-LARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGL---IDST-AGGTIEAVKQEGL---------EGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTK 434
T L + AL S P A + SDT+ +++ +QE LSG+ GA+ +K L +P+DT RLQ +P +F K Y G+ LL PAGA FFA KD K LA +S + + +T AV A IPYWL+RNP+EV+KT+QQ G+ +++T V+ + L EG Y GY NI YA+P D +KFV+YE Q + R + P E +++G+AA++++Q M+TPLDVVR R+M A T + S T+ T +A EG++ LF+G PR+ +A +SGAIQF +YE TK
Sbjct: 22 TSLFIGGVALTASSPSTRAAESLAELKQVSDTTVQRT--VQESLSGMVAGASLPVTKTLVKYPLDTATVRLQMPN---SPYSIFDLPNLLKGSYRGITVPLLSNIPAGAVFFAVKDATKAVLAASSADDIPKWLSTSLAVGIAQIPYWLVRNPSEVVKTRQQAGIEGYVNTTNPWEAFTRVRADILNNRTNVPLWEGYYVGYWENILYAYPADVLKFVLYE--QLAGGRPVTPAEGALVGAAATALSQFMTTPLDVVRNRLM---AKTTTSE--TTKQSNTNYLATLVGLAQTEGLSGLFAGAVPRVGKAMISGAIQFATYEETK 334
BLAST of EWM25420.1 vs. NCBI_GenBank
Match: gi|1072230687|gb|OEU15420.1| (mitochondrial carrier, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 172.555 bits (436), Expect = 2.800e-47 Identity = 105/261 (40.23%), Postives = 155/261 (59.39%), Query Frame = 0
Query: 192 PIDTWKTRLQYAKGNEA---PAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAG-GTIEAVK-------------QEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVW-QTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTK 434
P+DT R+Q N + P+ LF Y+GV+ +LL PAG FFA KD +K ++S G+ AT++A V AA IPYW++RNP+EV+K +QQ G+ G I+AV+ ++GL Y GY NI YA+P D IKF+ YE++ K + L+P+E + G+ A+S AQL++TPLDVVR R+MT + + + +S + + ++ + EEG+ LF+G PR+ +A LSGAIQF +YE TK
Sbjct: 2 PLDTATVRVQMPNSNYSIRDPSGLFNGCYNGVFLSLLSNIPAGGVFFAVKDAVKTSLKDS-GSPGWLATSLA-VAAAQIPYWIVRNPSEVVKVRQQAGIEGYGEGVSAIDAVRLTLQSRDDENRTIKDGLSEFYTGYWENIIYAYPADVIKFIAYESITKG-RKDLSPIEGAKAGAIATSTAQLLTTPLDVVRNRLMTGK---DGNGLSLSEKEKSKNYVESLITLGNEEGLKGLFAGGTPRVGKAILSGAIQFATYEETK 256 The following BLAST results are available for this feature:
BLAST of EWM25420.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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