EWM25410.1, cds5320 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|585107171|gb|EWM25410.1| (Glutaredoxin [Nannochloropsis gaditana]) HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query: 1 MSLRRALGISHIARSHRVALVMPDASTASYFPACASGRRSFYSTSGRKQSKRRDYRGPLLVGGSLVGASTIQCYLHHRAFSSPTVLGPNQARNQLIVSASSVTAIGAAAAAALAFSSTSMAAASAAAPSTVPTALQASNAISPTQDLQSQPASLNPLEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASSCVRAE 398
MSLRRALGISHIARSHRVALVMPDASTASYFPACASGRRSFYSTSGRKQSKRRDYRGPLLVGGSLVGASTIQCYLHHRAFSSPTVLGPNQARNQLIVSASSVTAIGAAAAAALAFSSTSMAAASAAAPSTVPTALQASNAISPTQDLQSQPASLNPLEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASSCVRAE
Sbjct: 1 MSLRRALGISHIARSHRVALVMPDASTASYFPACASGRRSFYSTSGRKQSKRRDYRGPLLVGGSLVGASTIQCYLHHRAFSSPTVLGPNQARNQLIVSASSVTAIGAAAAAALAFSSTSMAAASAAAPSTVPTALQASNAISPTQDLQSQPASLNPLEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASSCVRAE 398
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|299471554|emb|CBN80040.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 298.516 bits (763), Expect = 1.500e-96 Identity = 140/229 (61.14%), Postives = 171/229 (74.67%), Query Frame = 0
Query: 157 LEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWT---REVGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWY 382
LEG IT+YQYKICPFC K+K V+DF +PY +VNPLTK EIKFS DYRKVPI R+G E+ +DSPVI+ + L +V + VF S DA +WAEWADK+LAVLLFPN+TR+F ES+QAFSYVN+V FS +DK+SNQ +G+ AMWAAQGKIKKKYNI DER ALF A++ WT REV + PF GG +PN+GDL V+ CI AIEGLD KD++A + WY
Sbjct: 30 LEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKISNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALREV-DGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWY 257
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|922857313|gb|KOO25571.1| (hypothetical protein Ctob_008578 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 278.87 bits (712), Expect = 1.246e-88 Identity = 133/227 (58.59%), Postives = 163/227 (71.81%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIK-FSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTRE-VGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVE 386
+ +YQY+ICPFC KVKA+LD Y+VPYET +VNPLTK EIK +S YRKVPIA+LG E V DS VI + + D + A V + L F SP A+ WA+W+D++ AVLLFPNITRSF ES+QAF YV VPHFS LDK+SNQ +G+ MW AQGKIKKKY I DER A+ + W E VG KPF GG QPN D+ V+ C+ AI+ DA+K++MA T I WY RVE
Sbjct: 45 VLIYQYEICPFCNKVKALLDLYRVPYETTEVNPLTKGEIKAWSGGYRKVPIAKLGDEQVNDSGVISQALLDRMGTAGVLDAKQLAEFRSPKALEWAKWSDEKFAVLLFPNITRSFSESYQAFGYVMSVPHFSMLDKVSNQIIGSFFMWMAQGKIKKKYGIDDERAAVVAGINHWLNEGVGSKPFAGGKQPNFADVCVFGCLKAIDRTDAYKEIMAETAIKPWYDRVE 271
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|551583605|ref|XP_005777220.1| (electron carrier/ protein disulfide oxidoreductase [Emiliania huxleyi CCMP1516] >gi|485629450|gb|EOD24791.1| electron carrier/ protein disulfide oxidoreductase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 251.136 bits (640), Expect = 1.021e-77 Identity = 132/240 (55.00%), Postives = 169/240 (70.42%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARL-----GQ-EVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTRE-VGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANT-DISEWYTRVEHAIGASS 393
I LYQY+ICPFC K+KA+LD + + YET+DVNPLTK EIK S+YRKVPIA L G+ E + DSPVI +R+ D + AA + P R F SP AM WA+W+D +LAVLLFPNITRSFGE++QAF YV +VPHFS D+LSNQ VGA AMW AQGKIKKKY I DER AL A++ W E + + F GG P+ GD+ VY C+ AI+ A +++ + +++ WY R+E A+G S
Sbjct: 46 IRLYQYQICPFCNKIKALLDLHGLEYETVDVNPLTKKEIKPWSEYRKVPIAVLTPPAGGEPEQINDSPVIAERLLDAIDAAALRPARAAKAFRSPQAMEWAQWSDAKLAVLLFPNITRSFGEAYQAFGYVQDVPHFSTADRLSNQVVGACAMWMAQGKIKKKYAIDDERQALRGAIRTWVGEGLAGRAFAGGDAPHYGDVCVYGCLRAIDRTAAHAEILDDAPELARWYGRMEEAVGPSK 285
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|551608484|ref|XP_005785506.1| (electron carrier/ protein disulfide oxidoreductase [Emiliania huxleyi CCMP1516] >gi|485638694|gb|EOD33077.1| electron carrier/ protein disulfide oxidoreductase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 250.366 bits (638), Expect = 1.974e-77 Identity = 132/240 (55.00%), Postives = 169/240 (70.42%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARL-----GQ-EVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTRE-VGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANT-DISEWYTRVEHAIGASS 393
I LYQY+ICPFC K+KA+LD + + YET+DVNPLTK EIK S+YRKVPIA L G+ E + DSPVI +R+ D + AA + P R F SP AM WA+W+D +LAVLLFPNITRSFGE++QAF YV +VPHFS D+LSNQ VGA AMW AQGKIKKKY I DER AL A++ W E + + F GG P+ GD+ VY C+ AI+ A +++ + +++ WY R+E A+G S
Sbjct: 46 IRLYQYQICPFCNKIKALLDLHGLEYETVDVNPLTKKEIKPWSEYRKVPIAVLTPLAGGEPEQINDSPVIAERLLDAIDAAALRPARAAKAFRSPQAMEWAQWSDAKLAVLLFPNITRSFGEAYQAFGYVQDVPHFSTADRLSNQVVGAFAMWMAQGKIKKKYAIDDERQALRGAIRTWVGEGLAGRAFAGGDAPHYGDVCVYGCLRAIDRTAAHAEILDDAPELARWYGRMEEAVGPSK 285
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|1214674445|gb|OWY96711.1| (Prostaglandin E synthase [Phytophthora megakarya]) HSP 1 Score: 224.557 bits (571), Expect = 5.554e-67 Identity = 103/234 (44.02%), Postives = 150/234 (64.10%), Query Frame = 0
Query: 161 RITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEK-PFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASS 393
++ LYQY+ CP+CCKVKAVLD+ K+PYE ++VNPL+K E K +DY KVP+ R+ EVV DS I+ R+ +++ VAP + + +W +W D++L VL PNI R+ E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL+ AL W +GEK PFLGG +PN+ DL V+ + A+ GLD + D+M T+I W+TR+ +GASS
Sbjct: 88 KVVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLSKKETKTFTDYSKVPVVRIDDEVVVDSSAIISRLRELV----VAPKTSQNEEALEEEEKWRQWVDQKLIVLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVVMYLIAKRSKKKYNIDDERQALYSALDSWVGAIGEKRPFLGGDEPNMADLSVFGVLRAMNGLDTYNDMMRETNIEPWFTRMTDKVGASS 317
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|294892437|ref|XP_002774063.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239879267|gb|EER05879.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 221.09 bits (562), Expect = 2.451e-66 Identity = 108/237 (45.57%), Postives = 152/237 (64.14%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEK--PFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMAN-TDISEWYTRVEHAIGASSCV 395
+ +YQY+ICP+C KVKA LD+ +VPY+T+DVNPLTK EI+FS DYRKVPIA + V DS I+K++ ++L R T+ + + +W +W D +LAVLLFPN+TR+FGESF+AF Y+ +PH K+ N+ +G AMW A KI+KKY+I DER L + WT ++ + F GG P++ D+ VY CI ++EG L+ N TD+ WY R+ A+ SS V
Sbjct: 21 VNIYQYEICPYCNKVKAFLDWQQVPYKTMDVNPLTKGEIRFSKDYRKVPIAFIDGVQVNDSAEIIKKLVEVL--GRENVTKQMQ---DAEISKWVDWTDNKLAVLLFPNLTRTFGESFEAFGYIMNIPHMWLPMKMVNRLLGGWAMWMANDKIRKKYDIDDEREDLLKCIDEWTLDLAARGGKFHGGPSPDLADVAVYGCIRSLEGFTTHHWLLRNHTDLLAWYNRMFRAMPKSSRV 252
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|953487947|emb|CEG47964.1| (prostaglandin e [Plasmopara halstedii]) HSP 1 Score: 222.631 bits (566), Expect = 2.652e-66 Identity = 102/233 (43.78%), Postives = 151/233 (64.81%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVG-EKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASS 393
+ LYQY+ CP+CCKVKAVLD+YK+PYE ++VNPLTK E K +DYRKVPIAR+ EV+ DS I+ ++ +++ ++ D + D W +W D++L VL PNI R+ E+ QAF Y +F+ L++ ++ GA M+ + KKKYN+ DER A++ AL W + +G E+ FLGG +PN+ DL V+ + A+ GLD + D+M T+I W+TR+ +GASS
Sbjct: 82 VVLYQYEPCPYCCKVKAVLDYYKIPYEVVEVNPLTKKETKAFTDYRKVPIARINNEVIVDSSAIISKLRELMNESKSLKQSD-EARVEED--HWRQWVDQKLIVLAPPNIYRTVPEALQAFDYCLTEGNFTLLERRVAKYAGAMIMYIIAKRSKKKYNVDDERQAIYSALTSWIKAIGDEREFLGGHEPNMADLSVFGVLRAMHGLDTYNDIMRETNIEPWFTRMTAKVGASS 311
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|297734332|emb|CBI15579.3| (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 218.394 bits (555), Expect = 1.859e-64 Identity = 99/236 (41.95%), Postives = 154/236 (65.25%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASSCVRA 397
+ LYQY+ CPFC KVKA LD+Y +PY+ ++VNPL+K EIK+S DY+KVPI + E + DS I+ +++D ++ P + D + +W +W D L +L PNI RS E+ ++F Y+ +FSF +KL+ ++ GA AM+ K+KK++NI DER AL++A + W + + FLGG++PN+ DL V+ + I L + +D++ NT I EWYTR+E+A+G SS ++A
Sbjct: 106 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKREIKWS-DYKKVPILMVNDEQLVDSSAIIDKMSD-----KILPKKSADSASDDEERKWRQWVDNHLVHVLSPNIYRSTSEALESFDYITSNGNFSFTEKLTVKYAGAAAMYFVSKKLKKRHNITDERAALYEAAETWVDGLNGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVENTRIGEWYTRMENAVGESSRIKA 335
BLAST of EWM25410.1 vs. NCBI_GenBank
Match: gi|567960943|gb|ETK86490.1| (hypothetical protein L915_08882 [Phytophthora parasitica] >gi|567989655|gb|ETL39904.1| hypothetical protein L916_08805 [Phytophthora parasitica]) HSP 1 Score: 218.009 bits (554), Expect = 2.043e-64 Identity = 101/233 (43.35%), Postives = 147/233 (63.09%), Query Frame = 0
Query: 162 ITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWTREVGEK-PFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRVEHAIGASS 393
+ LYQY+ CP+CCKVKAVLD+ K+PYE ++VNPLTK E K +DYRKVP+ R+ EVV DS I+ R+ +++ + A + + W +W DK+L +L PNI R+ E+ QAF Y F+ +++ +++ GA M+ + KKKYNI DER AL+ AL W +G+K PFLGG +PN+ DL V+ + A+ GLD + D+M T+I W+TR+ +G SS
Sbjct: 89 VVLYQYEPCPYCCKVKAVLDYLKIPYEVVEVNPLTKKETKAFTDYRKVPVVRINDEVVVDSSAIISRLRELVEVPKDAQSEEALKE----EEEWRQWVDKKLILLTPPNIYRTVPEALQAFDYCLTEGKFTPMERRMSKYAGAVIMYLIAKRSKKKYNIDDEREALYSALNSWVDAIGDKRPFLGGDEPNMADLSVFGVLRAMHGLDTYNDMMRETNIEPWFTRMTAKVGPSS 317 The following BLAST results are available for this feature:
BLAST of EWM25410.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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