EWM25464.1, cds5311 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|585107225|gb|EWM25464.1| (hypothetical protein Naga_100005g121 [Nannochloropsis gaditana]) HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0 Identity = 485/485 (100.00%), Postives = 485/485 (100.00%), Query Frame = 0 Query: 1 MFPSSSSIKRSLSNLSPAKILRKGSNSSLSTQGSPARSLSVTEDASNNMEATTTASTPTPSTSNTMTVPPSSGTNSSTNPHAATSRNRSHQLSSLQVEVLEVKDLTGASAGPLYVELQLGEQRLRANVNSRRAMAAGARPEAVVFTQKKLEDLYKENLKFKLINKESKMVLGQSQLPVKKLMIGKKFEAFFNLAPPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAALAKDLHISAVTGRRAGVVGAAGAGLAEGGPGSGASHGRL 485 MFPSSSSIKRSLSNLSPAKILRKGSNSSLSTQGSPARSLSVTEDASNNMEATTTASTPTPSTSNTMTVPPSSGTNSSTNPHAATSRNRSHQLSSLQVEVLEVKDLTGASAGPLYVELQLGEQRLRANVNSRRAMAAGARPEAVVFTQKKLEDLYKENLKFKLINKESKMVLGQSQLPVKKLMIGKKFEAFFNLAPPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAALAKDLHISAVTGRRAGVVGAAGAGLAEGGPGSGASHGRL Sbjct: 1 MFPSSSSIKRSLSNLSPAKILRKGSNSSLSTQGSPARSLSVTEDASNNMEATTTASTPTPSTSNTMTVPPSSGTNSSTNPHAATSRNRSHQLSSLQVEVLEVKDLTGASAGPLYVELQLGEQRLRANVNSRRAMAAGARPEAVVFTQKKLEDLYKENLKFKLINKESKMVLGQSQLPVKKLMIGKKFEAFFNLAPPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAALAKDLHISAVTGRRAGVVGAAGAGLAEGGPGSGASHGRL 485
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|1072235262|gb|OEU19991.1| (hypothetical protein FRACYDRAFT_167885 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 194.512 bits (493), Expect = 1.462e-53 Identity = 113/311 (36.33%), Postives = 178/311 (57.23%), Query Frame = 0 Query: 150 LEDLYKENLKFKLINKESKMVLGQSQLPVKKLMIGKKFEAFFNLAPPPVAGKRAA---EVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQ--PYVANKWTLPLLVPF---GVLLLAASPFMGVALTIGLPVFLP--LLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAALAKD 450 L DLY+ +LK K+I ++K L +++LP+++L + + NL+ + ++ P IR+ ++L GP R E L + ++ VD+ +GA + P ++NK LL+P +L+AA P + + + +P LP +L+LGLVA T +I+ I+ +S+R GR + P+I + +GQ L+Y+TGPRP+P+ + + P G W +L TSL++D IG+SSYLLPV+GE DL WAP + + AMY +TSP YV +EE++PFTDIIP+AT+ W E L D Sbjct: 54 LRDLYQSDLKIKVIYNDTKYNL-ETELPLRQLHVQENKWLILNLSTTSTTTAKYGKEEDMSPPPTIRIKLKLSGPYRPEVAALVNFTQIWFGIVDKVENGAQSTLQKVPKLPNISNKHRNLLLIPIIPAAAILVAALPIVVGVVAMAVPFLLPFAILILGLVA--TTVISGGIVYVSTRKGRSELGLTFGPLIEHWIVSRSGQALVYDTGPRPTPVSVCRQVLPAGVWSKLWTSLLIDLIGSSSYLLPVVGEGFDLGWAPAQTILIMAMYDDTSPNLKYVSFIEEIMPFTDIIPSATIGWGCEFIPILWND 361
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|219126235|ref|XP_002183367.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405123|gb|EEC45067.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 171.4 bits (433), Expect = 2.671e-44 Identity = 131/412 (31.80%), Postives = 209/412 (50.73%), Query Frame = 0 Query: 60 PSTSNTMTVPPSSGTNSSTNP--HAATSRN--RSHQLSSLQVEVLEVKDLTGASAGPLYVELQLGEQ---------RLRANVNSRRAMAAGARPEAV---VFTQKKLEDLYKENLKFKLINKESKMVLGQSQLPVKKLMIGKKFEAFFNL---APPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQP-----YVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAAL 447 PS+SN + SS S T P + +SR R Q L VL DL + PLYV++ + E+ + + NS + + GA + + L +LY L+ +++ + + +++L +G NL P ++V P +RL + L GP R E L + ++ VD+ L+ + A + P ++W L L+VP +L+ ++P L + LP+ LPLL+ G T+ +IL S+ AGR +V + PV+ L + +GQ+L+Y+TGPRP+P+ +AK P W++L SL +D +G++SYLLP++GE D+AWAPL + + AMY TSP Y+ +EE+LPFTDI+P+AT W +E G L Sbjct: 2 PSSSNPNGIKASS---SMTTPLLSSGSSRTARRGEQKGQLTAVVLSAYDLP-SREPPLYVKISIPEKYAAQTGPPCQRHKDRNSFKFGSNGASSSTADNQISLRAPLPELYTSTLRVDVVSDGPESATLTATYRLEQLQVGVATWLILNLEESTPSSAVVPDTSDV-VPPTLRLQMTLDGPYRTEIGALVNWGQAWFRFVDQ-LEASGANFFSKLPLSIFAIFNSQWMLVLVVPIVAVLVVSAPIWVGFLAVTLPMLLPLLVAGAAVLFTVATVLLILYASTNAGREQVSGICMPVVHTLLASRSGQRLVYQTGPRPTPVGVAKAILPVSLWQKLFVSLWIDFMGSASYLLPIVGEGLDIAWAPLQTILIMAMYDTTSPNLKYISFLEEILPFTDIVPSATAGWLKEFGVPL 407
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|299117545|emb|CBN75389.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 168.703 bits (426), Expect = 1.270e-43 Identity = 115/356 (32.30%), Postives = 174/356 (48.88%), Query Frame = 0 Query: 113 LYVELQLGE---QRLR---ANVNSRRAMAAGARPEAVVFTQKKLEDLYKENLKF---------------KLINKESKMVLGQSQLPVKKLMIGKKFEA-----FFNLAPPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRE 442 +YVE++LG+ QRL + + A VF LE+++ E L K++ + + + P M + EA F L P P + P + LS L P R ++ ++ STVD LD + PY+ ++ L +P G+++LA+ P + V GLP+ +P+L++ G + + + L SR GR V+ V PV ++ ++LY GP PSP RIA+ P G W +L S+ +DTIG +SY++P+LGE DL WAP+ + + AMY +SP+A G +EELLPFTDIIPTATLAW +E Sbjct: 31 VYVEVRLGDLHVQRLSPVSVDPVTGDFSYESATGNITVFNSNILEEIFDETLHIVLRSWHPTSNWVDSAKILISVRSISIDSTVRPTGVDMGDESGEADRDFMVFRLEPVPGGDSFQTADESVPNLVLSATLRSPFRPPVESVARLLQGCASTVDLALDTVSLQTERVAPYLTSQAALVPTIPAGIVVLASLPLLCVLGVAGLPLLVPMLIVVAAVGGVGALLTAAVWLFSRGGRAWVQRAVRPVYDRVGRD--NPEVLYPVGPGPSPARIAQCLVPTGMWSKLAMSIAVDTIGCTSYIVPILGESADLLWAPVSYLLIDAMYHGSSPWAGVFGAMEELLPFTDIIPTATLAWMKE 384
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|224006890|ref|XP_002292405.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972047|gb|EED90380.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 169.088 bits (427), Expect = 2.622e-43 Identity = 101/260 (38.85%), Postives = 144/260 (55.38%), Query Frame = 0 Query: 210 PAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAA-----AGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAAL----AKDLHISAVTGRR 460 P +RL + L GP R E + + + ++ VD D A + A K L VP + +AA P +G L IG+P FLP++L+ L A T+ A L S+R GR +++ + +P + T TGQ+++Y+ GPRPSP +A P +LV SL++D IG++SYLLPVLGE DL WAP+ + + AMY + P YV L+EELLPFTDI+P+ATL W +E G + K + S V RR Sbjct: 203 PTLRLKLRLEGPYRPEISAVIKLANSWFGAVDIISDTAVGTVSGLVRDLPKNVPAVKLLLVPTVPIATVAVAALPILGGVLIIGIPFFLPIVLIILAAAATIGAAGSALYFSTREGRTKIQHVAEPTYQTFLMTKTGQRIVYDVGPRPSPQSLAHAVLPTDMIGKLVVSLVVDFIGSASYLLPVLGEGFDLTWAPMSMILVGAMYDDVMPNLKYVALIEELLPFTDILPSATLGWVKEFGPNIFEEGRKRMGDSKVAARR 462
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|1210525114|dbj|GAX16048.1| (hypothetical protein FisN_20Hh278 [Fistulifera solaris]) HSP 1 Score: 154.836 bits (390), Expect = 1.204e-38 Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 0 Query: 150 LEDLYKENLKFKLI--NKESKMVLGQSQLPVKKLMIGKKFEAFFNLAPPPVAGKRAAEVH---------AGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVA---NKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRE 442 L +LY++ +L+ N+ S+ + +L K+L I +K L+ P + + E H A P IRL + L GP R E L V + ++ VD D A P V+ +K+ L P LL+ + P + L +GLP+FLPLL++ L + + + L S+ +GR +V+AL PV++ + T+ GQ+L+Y TGPRP+P+ +A P+ W +L+ SLI+D G++SYLLP++GE D+AWAP+ + + AMY TSP Y+ EE+LP TDIIP+ATL W E Sbjct: 97 LAELYEQTAVIQLVYSNQPSQTLTTTYEL--KQLKIHEKTWLILPLSGAP---ETSGESHVKDDDDDDTAPPTIRLQLVLEGPYRTEIAALLQVSNAWFGLVDAIEDNIKEL-LAKCPKVSLPDSKYFLIPAAPILSLLVVSLPILLGVLLVGLPMFLPLLVVVGTVLLCVAVIASGLYCSTSSGRSQVQALFHPVVQAIIFTSWGQRLIYVTGPRPTPVNVAVAILPEHIWGKLIVSLIIDACGSASYLLPLVGEGFDIAWAPIQTILIMAMYDATSPNLKYLSFFEEILPLTDIIPSATLGWLIE 397
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|1210512097|dbj|GAX28952.1| (hypothetical protein FisN_20Lh278 [Fistulifera solaris]) HSP 1 Score: 148.288 bits (373), Expect = 3.380e-36 Identity = 93/238 (39.08%), Postives = 139/238 (58.40%), Query Frame = 0 Query: 208 AGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVA---NKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRE 442 A P IRL + L GP R E L + + ++ VD D P V+ +K+ L P LL+ + P + L +GLP+FLPLL++ L + + + L S+ +GR +V+ L PV++ + T+ GQ+L+Y TGPRP+P+ +A P+ W +L+ SLI+D G++SYLLP++GE D+AWAP+ + + AMY TSP Y+ EE+LP TDIIP+ATL W E Sbjct: 166 APPTIRLQLVLEGPYRTEIAALLQLGNAWFGLVDAIEDNIKELLSKC-PKVSLPDSKYFLIPAAPILSLLVVSLPILLGVLLVGLPMFLPLLVVVGSLLLCVAVVASGLYCSTSSGRSQVQVLFHPVVQAIVFTSWGQRLIYVTGPRPTPVNVAVAILPEHIWGKLIVSLIIDACGSASYLLPLVGEGFDIAWAPIQTILIMAMYDATSPNLKYLSFFEEILPLTDIIPSATLGWLIE 402
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|397577371|gb|EJK50558.1| (hypothetical protein THAOC_30415, partial [Thalassiosira oceanica]) HSP 1 Score: 135.191 bits (339), Expect = 4.892e-31 Identity = 100/330 (30.30%), Postives = 158/330 (47.88%), Query Frame = 0 Query: 150 LEDLYKENLKFKLINKESKMVLGQSQLPVKKLMIGKKFEAFFNL------APPPVAGKRAAEVHAG----PAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAG-----HAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFRENGAAL----AKDLHISAVTGRR 460 L L++ + F L L + K L + + NL P + RA++ G P +RL + + GP R E + ++ + ++ VD D + + A + L VP + + A P + + LP LP+L+L L G L S+R GR R++ + +P + T TGQ+++Y+ GPRPSP +A P+ +LV SL++D +G++SYL+P+ GE DL WAP+ V + AMY + P YV L+EELLP TD IP+ATL W +E G + ++++ GRR Sbjct: 144 LSTLFESTVSFTLTYANPARNLTSTVTIHKTLRVNETQWLILNLDSAMKGTPLESSESRASDSEKGDESTPTLRLKLRVEGPYRPEVAAVINLANSWFHAVDAVTDATVGTTTGFVRDIPKNFPAVQLLLVPTVPLATIGVVALPIVAGVGIVCLPFLLPVLMLLLTIGAISGAIGGGLYFSTREGRTRIQHVAEPSYQTFLMTKTGQRIVYDVGPRPSPQALAHAVLPQDMMGKLVASLLVDLVGSASYLIPLAGEAFDLTWAPVSMVLVGAMYDDVMPNLKYVALMEELLPLTDWIPSATLGWVKEFGPGIINIGVSRMNVAKRAGRR 473
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|970662164|gb|KUF99575.1| (hypothetical protein AM588_10010566 [Phytophthora nicotianae]) HSP 1 Score: 104.375 bits (259), Expect = 1.362e-22 Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0 Query: 287 IGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRI------AKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFREN 443 +G PV++ ++G+ L L ++I ++ + R V + + GQ LL+E P L AK F + +LV SL +D +G +++++P LGE D+ WAP+ A + +Y E+SP+A YV +EELLPFTDIIPTATLAW +EN Sbjct: 1 MGFPVWI---VVGVAMALVTLFSTISAVVTVKLARSE---RVKGACQHFLTSQQGQLLLFEGMPGEESLSTSALSARAKEFVLENPSRKLVASLAIDFLGNATFVVPGLGEMADVLWAPVSAKMVDTLYKESSPHAKYVAFLEELLPFTDIIPTATLAWMKEN 157
BLAST of EWM25464.1 vs. NCBI_GenBank
Match: gi|566015521|gb|ETI38432.1| (hypothetical protein F443_15831 [Phytophthora parasitica P1569]) HSP 1 Score: 103.99 bits (258), Expect = 7.941e-21 Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = 0 Query: 290 PVFLPLLLL------------GLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRI------AKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAWFREN 443 PV+LPL LL G+ L L ++I ++ + R V + + GQ LL+E P L AK F + +LV SL +D +G +++++P LGE D+ WAP+ A + +Y E+SP+A YV +EELLPFTDIIPTATLAW +EN Sbjct: 177 PVWLPLTLLVGVMGFPVWIVVGVAMALVTLFSTISAVVTVKLARSE---RVKGACQHFLTSQQGQLLLFEGMPGEESLSTSALSARAKEFVLENPSRKLVASLAIDFLGNATFVVPGLGEMADVLWAPVSAKMVDTLYKESSPHAKYVAFLEELLPFTDIIPTATLAWMKEN 345 The following BLAST results are available for this feature:
BLAST of EWM25464.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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