EWM30154.1, cds530 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|585112810|gb|EWM30154.1| (u-box domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 317.39 bits (812), Expect = 2.200e-109 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MGQEGGRVGGGEEEGGEEGEEEEGEDAEEEEEKKLHALSALSMSGNEEEEEEEDAAEEEEEEREDDDEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIEIWRCQRQRRQQPLQDEEKAEKGTVHAAEGGVGRE 166
MGQEGGRVGGGEEEGGEEGEEEEGEDAEEEEEKKLHALSALSMSGNEEEEEEEDAAEEEEEEREDDDEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIEIWRCQRQRRQQPLQDEEKAEKGTVHAAEGGVGRE
Sbjct: 1 MGQEGGRVGGGEEEGGEEGEEEEGEDAEEEEEKKLHALSALSMSGNEEEEEEEDAAEEEEEEREDDDEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIEIWRCQRQRRQQPLQDEEKAEKGTVHAAEGGVGRE 166
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|1041762440|gb|OBW67240.1| (Uncharacterized protein AUREO_027080 [Aureobasidium pullulans]) HSP 1 Score: 82.8037 bits (203), Expect = 6.448e-16 Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 68 EAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMI-EIWR 135
E P+ VD +S E+M DPV+T +G+SYERA +LE ++ +DP+T+EPL DLRPN ALR+++ E W+
Sbjct: 217 EVPDYLVDTISFEIMHDPVITRTGHSYERATLLEYLKNSPVDPLTREPLTAKDLRPNVALRQVLEEFWK 285
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|662525204|gb|KEQ82589.1| (U-box-domain-containing protein [Aureobasidium pullulans EXF-150]) HSP 1 Score: 82.4185 bits (202), Expect = 7.369e-16 Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 68 EAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMI-EIWR 135
E P+ VD +S E+M DPV+T +G+SYERA +LE ++ +DP+T+EPL DLRPN ALR+++ E W+
Sbjct: 217 EVPDYLVDTISFEIMHDPVITRTGHSYERATLLEYLKNSPVDPLTREPLTVKDLRPNVALRQVLEEFWK 285
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|255083807|ref|XP_002508478.1| (predicted protein [Micromonas commoda] >gi|226523755|gb|ACO69736.1| predicted protein [Micromonas commoda]) HSP 1 Score: 81.2629 bits (199), Expect = 1.755e-15 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0
Query: 63 REDD--DEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRA-LDPMTQEPLQETDLRPNRALREMIEIW 134
REDD DE P+ F L+ EV RDPV+ PSG+SYER ++E +R+ DP+T+EPL E+DLRPN +LR W
Sbjct: 183 REDDRSDEPPDCFCCKLTFEVFRDPVVAPSGHSYERVAVMEHLRKVGKFDPVTREPLVESDLRPNHSLRNAAHEW 257
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|927412750|ref|XP_013952206.1| (hypothetical protein TRIVIDRAFT_159562 [Trichoderma virens Gv29-8] >gi|358380328|gb|EHK18006.1| hypothetical protein TRIVIDRAFT_159562 [Trichoderma virens Gv29-8]) HSP 1 Score: 80.4925 bits (197), Expect = 2.637e-15 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 0
Query: 16 GEEGEEEEGEDAEEEEEKKLHALSALSMSGNEEEEEEEDAAEEEEEEREDDDEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIE 132
EG+E E EEE + + LS++ E A + +++RE P+ +D +S ++M DPV+T +G SYERA I+E +RR DP+T+EPL DLRPN ALR+ E
Sbjct: 156 ATEGDETERSIIEEETNQHMALLSSVF----------EAARAQNQKKRE----VPDWAIDDISFDIMVDPVITKTGKSYERATIMEHLRRHPSDPLTREPLSAADLRPNLALRQACE 258
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|615428760|ref|XP_007589064.1| (putative u-box domain-containing protein [Neofusicoccum parvum UCRNP2] >gi|485916082|gb|EOD43493.1| putative u-box domain-containing protein [Neofusicoccum parvum UCRNP2]) HSP 1 Score: 80.8777 bits (198), Expect = 2.873e-15 Identity = 33/62 (53.23%), Postives = 48/62 (77.42%), Query Frame = 0
Query: 68 EAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALRE 129
E P+ +D +S E+M DPV+T +G+SYERA ++E ++R +DP+T+EPL+ DLRPN ALRE
Sbjct: 209 EVPDHLIDNISFEIMHDPVITKNGHSYERATLIEHLKRSPMDPLTREPLKIEDLRPNIALRE 270
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|818168076|gb|KKP07381.1| (STIP1 likey and U-box containing protein 1 [Trichoderma harzianum]) HSP 1 Score: 80.4925 bits (197), Expect = 3.486e-15 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0
Query: 45 GNEEEEEEEDAAEEEEEEREDDDEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIE 132
NE+ E + + E P+ +D +S ++M DPV+T +G SYERA I+E +RR DP+T+EPL +DLRPN ALR+ E
Sbjct: 171 ANEKIATLSSVFEASRSQNQKKREVPDWAIDDISFDIMVDPVITKTGKSYERATIMEHLRRHPSDPLTREPLSASDLRPNLALRQACE 258
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|918830003|ref|XP_013431813.1| (U-box-domain-containing protein [Aureobasidium namibiae CBS 147.97] >gi|662520429|gb|KEQ77987.1| U-box-domain-containing protein [Aureobasidium namibiae CBS 147.97]) HSP 1 Score: 79.7221 bits (195), Expect = 7.955e-15 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 68 EAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMI-EIWR 135
E P+ VD +S E+M DPV+T +G+SYERA +LE ++ DP+T+EPL +LRPN ALR+++ E W+
Sbjct: 217 EVPDYLVDTISFEIMHDPVITRTGHSYERATLLEHLKNNPTDPLTREPLTPKELRPNVALRQVLEEFWK 285
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|1153495692|gb|OPB47169.1| (hypothetical protein A0O28_0072930 [Trichoderma guizhouense]) HSP 1 Score: 78.9518 bits (193), Expect = 1.203e-14 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 68 EAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIE 132
E P+ +D +S ++M DPV+T +G SYERA I+E +RR DP+T+EPL +DLRPN ALR+ E
Sbjct: 194 EVPDWAIDDISFDIMVDPVITKTGKSYERATIMEHLRRHPSDPLTREPLSASDLRPNLALRQACE 258
BLAST of EWM30154.1 vs. NCBI_GenBank
Match: gi|1025679488|gb|OAA66798.1| (U-box domain-containing protein [Sporothrix insectorum RCEF 264]) HSP 1 Score: 78.5666 bits (192), Expect = 1.712e-14 Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 0
Query: 54 DAAEEEEEEREDDDEAPEPFVDPLSMEVMRDPVLTPSGYSYERAVILEQIRRRALDPMTQEPLQETDLRPNRALREMIE 132
D E E PE VD ++ +M DPV+T +G SYERA ILE +RR+ DP+T+EPL DLRPNR L+ E
Sbjct: 181 DTFERSRSASEKKRRVPEWAVDDITFGIMVDPVITKTGKSYERAAILEHLRRQCTDPLTREPLTTADLRPNRGLKMACE 259 The following BLAST results are available for this feature:
BLAST of EWM30154.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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