EWM25357.1, cds5299 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|585107118|gb|EWM25357.1| (poly (adp-ribose) polymerase member 8 [Nannochloropsis gaditana]) HSP 1 Score: 1431.39 bits (3704), Expect = 0.000e+0 Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = 0
Query: 1 METAKHAKEEMCIISKEVANVMAVLSLRADPMIEGPMKRQHLGSSPFSTSSPSTSSLSSSSPSSSSSSSSSSSSSSSSPFSLSSSSPFSLSSSSPSCSSSIHLYRLSIEIQSLEWDAEARTLHLSLNPDVALNAASASSFPTEVLIRAQQLLLAPPLELQLFFPESTAKAPFCFSSTDAGAIVARRANEALQPLKEASLLQALCLLTALVKDEAGAVWPENDPCWRRAWAERVVARVREQGLAVDLRLSLLSMSKAQSATLRPPVPRFFFESEGGYAVDRTVLVSAVNAVPPLHVICGGGGGRGGGRGDGARGEGDRLEGVEAVESLPFPSCLVLQYLLFRERVTLMNSSDAVAPGPRGRRGHEHDQGAAGGVEGGKEDEEWEGEKRQAHALDALAGLPSPGGPTPSQGGRETGLGPSGGPLRRFLASAFFGPRGDRPCFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGSDGSAVAVTAARQRSEPSTSTPVSSPTREVNRDRSEYWVVANDSHLVVRALLLFKDPAILPNAPTFPLSTRTVRQRRGSPGAAANLPPQPSPPLPRAPVARRQLYLHFVLGVMRVILMGTAFIIFLETVEKLLARREKSLGGGRGRRAA 715
METAKHAKEEMCIISKEVANVMAVLSLRADPMIEGPMKRQHLGSSPFSTSSPSTSSLSSSSPSSSSSSSSSSSSSSSSPFSLSSSSPFSLSSSSPSCSSSIHLYRLSIEIQSLEWDAEARTLHLSLNPDVALNAASASSFPTEVLIRAQQLLLAPPLELQLFFPESTAKAPFCFSSTDAGAIVARRANEALQPLKEASLLQALCLLTALVKDEAGAVWPENDPCWRRAWAERVVARVREQGLAVDLRLSLLSMSKAQSATLRPPVPRFFFESEGGYAVDRTVLVSAVNAVPPLHVICGGGGGRGGGRGDGARGEGDRLEGVEAVESLPFPSCLVLQYLLFRERVTLMNSSDAVAPGPRGRRGHEHDQGAAGGVEGGKEDEEWEGEKRQAHALDALAGLPSPGGPTPSQGGRETGLGPSGGPLRRFLASAFFGPRGDRPCFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGSDGSAVAVTAARQRSEPSTSTPVSSPTREVNRDRSEYWVVANDSHLVVRALLLFKDPAILPNAPTFPLSTRTVRQRRGSPGAAANLPPQPSPPLPRAPVARRQLYLHFVLGVMRVILMGTAFIIFLETVEKLLARREKSLGGGRGRRAA
Sbjct: 1 METAKHAKEEMCIISKEVANVMAVLSLRADPMIEGPMKRQHLGSSPFSTSSPSTSSLSSSSPSSSSSSSSSSSSSSSSPFSLSSSSPFSLSSSSPSCSSSIHLYRLSIEIQSLEWDAEARTLHLSLNPDVALNAASASSFPTEVLIRAQQLLLAPPLELQLFFPESTAKAPFCFSSTDAGAIVARRANEALQPLKEASLLQALCLLTALVKDEAGAVWPENDPCWRRAWAERVVARVREQGLAVDLRLSLLSMSKAQSATLRPPVPRFFFESEGGYAVDRTVLVSAVNAVPPLHVICGGGGGRGGGRGDGARGEGDRLEGVEAVESLPFPSCLVLQYLLFRERVTLMNSSDAVAPGPRGRRGHEHDQGAAGGVEGGKEDEEWEGEKRQAHALDALAGLPSPGGPTPSQGGRETGLGPSGGPLRRFLASAFFGPRGDRPCFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGSDGSAVAVTAARQRSEPSTSTPVSSPTREVNRDRSEYWVVANDSHLVVRALLLFKDPAILPNAPTFPLSTRTVRQRRGSPGAAANLPPQPSPPLPRAPVARRQLYLHFVLGVMRVILMGTAFIIFLETVEKLLARREKSLGGGRGRRAA 715
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|299116965|emb|CBN75069.1| (poly (ADP-ribose) polymerase family, member 8 [Ectocarpus siliculosus]) HSP 1 Score: 85.1149 bits (209), Expect = 1.938e-13 Identity = 64/210 (30.48%), Postives = 99/210 (47.14%), Query Frame = 0
Query: 435 GDRPCFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNF-----GSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGSDGSAVAVTAA---------------RQRSEPSTSTPVSSPTREVNRDRSE--YWVVANDSHLVVRALLLFKD 622
GD P + F + + FDA A G++ +HGSSP +FHSI++ GLR +SG+R M+NGA FG+G+Y++ C+ A F GS G VW S F + +AS P A+ V+ + P+ G + +A A + + R R +E+ E Y+VV++ S + V A+LLF +
Sbjct: 333 GDVPTYAFEVVLPSDPAFDAQAELGGSKVAYHGSSPENFHSILNTGLRVMSGSRLMKNGAVFGNGIYLSGSCKAAATFAYRGDGS-GTTVWPRSTFVDNHSASR--------PAVAHDVVTASGVAGTPDDTKGDSPAGAAATARSGSASVASSATNARCKRFRHRLVAKCRVLNGDGVKEIEGSGKEASYFVVSDASRVRVEAILLFHE 533
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|221131139|ref|XP_002164087.1| (PREDICTED: mono [ADP-ribose] polymerase PARP16-like [Hydra vulgaris] >gi|828189999|ref|XP_012560136.1| PREDICTED: mono [ADP-ribose] polymerase PARP16-like [Hydra vulgaris]) HSP 1 Score: 77.7962 bits (190), Expect = 7.232e-12 Identity = 53/190 (27.89%), Postives = 91/190 (47.89%), Query Frame = 0
Query: 437 RPCFIFPLRHAP--NARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGSDGSAVAVTAARQRSEPSTSTPVSSPTREVNRDRSEYWVVANDSHLVVRALLLFKDPA 624
+P +IF +++ + +FD LA+ +G ++GFHGS +FHSIV+ GL+ M A FG+GVY++ V+ + S G W+HS+ G + + +A+CE++D P +C +G A R R+ S + V P + Y+VV + + V+ + +F D
Sbjct: 121 QPDYIFEIKYNTFSSQKFDDLAKMYGVKYGFHGSRMDNFHSIVNNGLQV-----HMVKNAVFGEGVYLSEDLSVSMPYISSGFT-WQHSKLGQQISC-----------------VAVCEVLDHPGVKCTMKTVNG------ANRSRANNSEAGEV--PKK--------YFVVTSSDLVRVKYIFVFTDKT 271
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|1173928455|gb|OQR82040.1| (hypothetical protein THRCLA_23253 [Thraustotheca clavata]) HSP 1 Score: 76.2554 bits (186), Expect = 4.716e-11 Identity = 47/116 (40.52%), Postives = 61/116 (52.59%), Query Frame = 0
Query: 440 FIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEII 555
FI + +PN FDALA +H T +HGS FHSI+ GL+ +SGTR M +G FGDG+Y A +VA NF +G SQ +T S A +A+CEII
Sbjct: 202 FIGQVIISPNPWFDALAEKHKTTVCYHGSKISHFHSILQNGLQIMSGTRHMGSGNIFGDGIYFAQSAQVAMNFA-FGAA----SQHWQHSTVMSKDAIC----------VAVCEII 302
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|698797628|ref|XP_009831843.1| (hypothetical protein H257_07859 [Aphanomyces astaci] >gi|574113634|gb|ETV79124.1| hypothetical protein H257_07859 [Aphanomyces astaci]) HSP 1 Score: 74.7146 bits (182), Expect = 1.836e-10 Identity = 51/150 (34.00%), Postives = 66/150 (44.00%), Query Frame = 0
Query: 433 PRGDRP--CFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGSDGSAVAVTAARQR 580
P D P CF + N FD A + G + +HGS SFHSI+ GL +SGTR M +G FGDG+Y A VA NF S W +S A AP + +A+CE+I P P S + V +R
Sbjct: 249 PSCDLPHVCFAATVVQTANPWFDRQAAKFGVKMCYHGSRLASFHSILQNGLHVMSGTRHMSSGNLFGDGIYFAESVHVAANFASPTPTTWPNS-------------AVLAP---SATCVAVCEVICDPAASKLLPSSQANGAYVVVQDER 382
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|1173946011|gb|OQR94582.1| (hypothetical protein ACHHYP_01105 [Achlya hypogyna]) HSP 1 Score: 72.7886 bits (177), Expect = 6.718e-10 Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 0
Query: 440 FIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGS--DGSAVAVTAARQ 579
F+ + +P+ FD A +HG+ +HGS FHSI+ GL+ +SGTR M +G FGDG+Y A +VA NF ++G P + SQ +R + +A +A+C+++ P P S DG+ ++ R
Sbjct: 214 FVGEVIASPDPWFDRAAAEHGSTMCYHGSKMVHFHSILQNGLQVMSGTRHMSSGNVFGDGIYFAQSPQVAMNF-AFGTPCQQWSQ--SRVMSKNAIC------------VAVCQVLKDPAVLKTLPASQADGTYYVLSDHRH 340
BLAST of EWM25357.1 vs. NCBI_GenBank
Match: gi|673035556|ref|XP_008871739.1| (hypothetical protein H310_07977 [Aphanomyces invadans] >gi|574472178|gb|ETV99183.1| hypothetical protein H310_07977 [Aphanomyces invadans]) HSP 1 Score: 71.633 bits (174), Expect = 3.663e-9 Identity = 49/150 (32.67%), Postives = 65/150 (43.33%), Query Frame = 0
Query: 433 PRGDRP--CFIFPLRHAPNARFDALARQHGTQWGFHGSSPGSFHSIVSWGLRSLSGTRGMRNGAAFGDGVYVASKCEVARNFGSWGVPVWKHSQFGNRATASSAAAASGAPPVFAYQVIALCEIIDMPEYRCGFPGS--DGSAVAVTAAR 578
P D P CF + + + FD A + GT+ +HGS SFHSI+ GL +SGTR M +G FGDG+Y A VA NF S W S +A + +CE+I P P + DG+ V R
Sbjct: 35 PTSDLPHVCFAARVVQSADPWFDCQAAKFGTKVCYHGSRMASFHSILQNGLHVMSGTRHMSSGNLFGDGIYFAESIHVAANFASPAASAWAKSAILTKAAT----------------CLVVCEVICDPSRMKLLPSAKEDGAYYVVQDER 168 The following BLAST results are available for this feature:
BLAST of EWM25357.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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