EWM25387.1, cds5294 (CDS) Nannochloropsis gaditana

Overview
NameEWM25387.1
Unique Namecds5294
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:673690..675318 -

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Properties
Property NameValue
Protein idEWM25387.1
ProductAquaporin
Orig transcript idgnl|cribi|Naga_100005g101.6681.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:673690..675318 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR022357MIP_CS
IPR023271Aquaporin-like
IPR000425MIP
Homology
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BLAST of EWM25387.1 vs. NCBI_GenBank
Match: gi|585107148|gb|EWM25387.1| (Aquaporin [Nannochloropsis gaditana])

HSP 1 Score: 1063.52 bits (2749), Expect = 0.000e+0
Identity = 542/542 (100.00%), Postives = 542/542 (100.00%), Query Frame = 0 
Query:    1 MRPGDEEEAPLVLSPRRGGPSPLAGGRAAWFGTSHNGATQEAQSYGAFVKSTDHSSMDTISHQVDDDTSLPSTRLPRLFENWPLLVEMLASYTLGLAAFSSNSSPWTVGLIFAGLAHAASTSAVSGGAGSYYLQANPVLTLGQLVRGHLSLPRAVLYCGAQFLGITLACLTFATSTGGGAMHAVGSLTSCDALPWGHGLFLTTIFASAFAYVALAAWDSMSLALEACCSFYGLATGAAYAAAMASVQSRSISSGLLNPWVGLVGVISSALAPSAGSDHAGFGHNGPSSMACDTVFILGPLLGALLGCFLSWLTSLHGSEKEAMLRALSPIAPLLVETVGVMFLVLSLGAAQQGWIPGAFALALTLCAWRRSGAQFNPSVTLAIFLLKRRMFRWTSLLFYILAHVAGALLGTCLLLLLPPSREMAAPSLLDTPVVLGLDEALLLLVFTTAYLAVFVANTDAEYDEGFLHPALMVGLTLTGLLGALAGRDGDVLLTGLYNPAVTLVVWAVARASVGTVLLGASLQLLASGLVFALFWGKAQVSL 542
            MRPGDEEEAPLVLSPRRGGPSPLAGGRAAWFGTSHNGATQEAQSYGAFVKSTDHSSMDTISHQVDDDTSLPSTRLPRLFENWPLLVEMLASYTLGLAAFSSNSSPWTVGLIFAGLAHAASTSAVSGGAGSYYLQANPVLTLGQLVRGHLSLPRAVLYCGAQFLGITLACLTFATSTGGGAMHAVGSLTSCDALPWGHGLFLTTIFASAFAYVALAAWDSMSLALEACCSFYGLATGAAYAAAMASVQSRSISSGLLNPWVGLVGVISSALAPSAGSDHAGFGHNGPSSMACDTVFILGPLLGALLGCFLSWLTSLHGSEKEAMLRALSPIAPLLVETVGVMFLVLSLGAAQQGWIPGAFALALTLCAWRRSGAQFNPSVTLAIFLLKRRMFRWTSLLFYILAHVAGALLGTCLLLLLPPSREMAAPSLLDTPVVLGLDEALLLLVFTTAYLAVFVANTDAEYDEGFLHPALMVGLTLTGLLGALAGRDGDVLLTGLYNPAVTLVVWAVARASVGTVLLGASLQLLASGLVFALFWGKAQVSL
Sbjct:    1 MRPGDEEEAPLVLSPRRGGPSPLAGGRAAWFGTSHNGATQEAQSYGAFVKSTDHSSMDTISHQVDDDTSLPSTRLPRLFENWPLLVEMLASYTLGLAAFSSNSSPWTVGLIFAGLAHAASTSAVSGGAGSYYLQANPVLTLGQLVRGHLSLPRAVLYCGAQFLGITLACLTFATSTGGGAMHAVGSLTSCDALPWGHGLFLTTIFASAFAYVALAAWDSMSLALEACCSFYGLATGAAYAAAMASVQSRSISSGLLNPWVGLVGVISSALAPSAGSDHAGFGHNGPSSMACDTVFILGPLLGALLGCFLSWLTSLHGSEKEAMLRALSPIAPLLVETVGVMFLVLSLGAAQQGWIPGAFALALTLCAWRRSGAQFNPSVTLAIFLLKRRMFRWTSLLFYILAHVAGALLGTCLLLLLPPSREMAAPSLLDTPVVLGLDEALLLLVFTTAYLAVFVANTDAEYDEGFLHPALMVGLTLTGLLGALAGRDGDVLLTGLYNPAVTLVVWAVARASVGTVLLGASLQLLASGLVFALFWGKAQVSL 542
The following BLAST results are available for this feature:
BLAST of EWM25387.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107148|gb|EWM25387.1|0.000e+0100.00Aquaporin [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5307rna5307Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications