EWM25398.1, cds5290 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|585107159|gb|EWM25398.1| (ccaat-binding factor complex subunit [Nannochloropsis gaditana]) HSP 1 Score: 1258.05 bits (3254), Expect = 0.000e+0 Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0 Query: 1 MSFRLLLKRRLVGRFLLGLGSGDRQGGGERARSCWLVYCYCVSARSECPSYCMDAISSAQTKTTRNKNYALNLNGVTSTSDKDSVDGSGTSNAPSSRPALGTRDCAQTSGDFTLQASLHESDVFAWRRVMPQQPFSSPSQGGGPLPNSSPSSRCHELSGDHEQQDGRPEHPSSSQLHHYHHAMRTHLSQQDSQGHHLHQQRIQAPEQRPQHQHDHGNASGQHSIYHQQLPLQMQQDDLQSSQLQLQQQHHADQSKLQSHPHDQRHLQQLNHHHHGDPLRQFPLIYDSQQQRQRHQQQSQHQQPQQQQQQQQQQQQRPPPLPPPSPAQQLQERHSEDVEGANYRPNHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQSGNGQREAVREVAKHSDAQTGDATALSDKSVRDPARVAVERDAAVAEEKREDPLVVALLHTAGRSEVASHSVPLVVWFRGRIRQNLTQEDSYQEQQQQLSPKEAQRVEPQRQHLEGNEYR 613 MSFRLLLKRRLVGRFLLGLGSGDRQGGGERARSCWLVYCYCVSARSECPSYCMDAISSAQTKTTRNKNYALNLNGVTSTSDKDSVDGSGTSNAPSSRPALGTRDCAQTSGDFTLQASLHESDVFAWRRVMPQQPFSSPSQGGGPLPNSSPSSRCHELSGDHEQQDGRPEHPSSSQLHHYHHAMRTHLSQQDSQGHHLHQQRIQAPEQRPQHQHDHGNASGQHSIYHQQLPLQMQQDDLQSSQLQLQQQHHADQSKLQSHPHDQRHLQQLNHHHHGDPLRQFPLIYDSQQQRQRHQQQSQHQQPQQQQQQQQQQQQRPPPLPPPSPAQQLQERHSEDVEGANYRPNHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQSGNGQREAVREVAKHSDAQTGDATALSDKSVRDPARVAVERDAAVAEEKREDPLVVALLHTAGRSEVASHSVPLVVWFRGRIRQNLTQEDSYQEQQQQLSPKEAQRVEPQRQHLEGNEYR Sbjct: 1 MSFRLLLKRRLVGRFLLGLGSGDRQGGGERARSCWLVYCYCVSARSECPSYCMDAISSAQTKTTRNKNYALNLNGVTSTSDKDSVDGSGTSNAPSSRPALGTRDCAQTSGDFTLQASLHESDVFAWRRVMPQQPFSSPSQGGGPLPNSSPSSRCHELSGDHEQQDGRPEHPSSSQLHHYHHAMRTHLSQQDSQGHHLHQQRIQAPEQRPQHQHDHGNASGQHSIYHQQLPLQMQQDDLQSSQLQLQQQHHADQSKLQSHPHDQRHLQQLNHHHHGDPLRQFPLIYDSQQQRQRHQQQSQHQQPQQQQQQQQQQQQRPPPLPPPSPAQQLQERHSEDVEGANYRPNHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQSGNGQREAVREVAKHSDAQTGDATALSDKSVRDPARVAVERDAAVAEEKREDPLVVALLHTAGRSEVASHSVPLVVWFRGRIRQNLTQEDSYQEQQQQLSPKEAQRVEPQRQHLEGNEYR 613
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|530480585|gb|EQB59542.1| (histone-like transcription factor and archaeal histone [Colletotrichum gloeosporioides Cg-14]) HSP 1 Score: 129.798 bits (325), Expect = 4.809e-30 Identity = 69/163 (42.33%), Postives = 97/163 (59.51%), Query Frame = 0 Query: 351 VVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRR--GKANWADAATEAEEAVSGPVGVVQSGNGQREAVREVAKHSDA 511 ++ W+ IN +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A +R G+A A A+ A P GQ A+ + A HS + Sbjct: 63 ILTTYWQQ---TINHLESDNHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALAKSDMFDFLIDIVPREEASSHAKRTAGQAAPAGQGVPAQAASQIP--------GQHGAIPQAANHSSS 209
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|1066283671|ref|XP_018035915.1| (histone-fold-containing protein [Paraphaeosphaeria sporulosa] >gi|1027145100|gb|OAG05550.1| histone-fold-containing protein [Paraphaeosphaeria sporulosa]) HSP 1 Score: 129.798 bits (325), Expect = 5.170e-30 Identity = 72/202 (35.64%), Postives = 110/202 (54.46%), Query Frame = 0 Query: 345 NHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVV--------------QSGNG----QREAVREVAKHSDAQTGDATALSDKSVRDPA 528 N +++ W+ + + +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A+P R G ++T + A + P G + G G Q+E R+ ++ GD A + + DP+ Sbjct: 72 NGSYRDILNTYWQQQ---VTKLETDEHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALSKSDMFDFLIDIVPREEALPHKRSG----GQSSTAVQAAGAVPAGALAQQGVHPQHQMAPPDYGIGQHMPQQEDFRQPGMYAGPVQGDPNAYGQQQMFDPS 261
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|596726019|ref|XP_007287196.1| (ccaat-binding factor complex subunit [Colletotrichum gloeosporioides Nara gc5] >gi|429848229|gb|ELA23737.1| ccaat-binding factor complex subunit [Colletotrichum gloeosporioides Nara gc5]) HSP 1 Score: 129.798 bits (325), Expect = 5.253e-30 Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 0 Query: 351 VVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQSGNGQREAVREVAKHSDA 511 ++ W+ IN +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A +R A A A + V P +GQ A+ + A HS + Sbjct: 63 ILTTYWQQ---TINHLESDNHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALAKSDMFDFLIDIVPREEASSHAKRT----AGQAAPAGQGV--PAQAASQISGQHGAIPQAANHSSS 209
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|330912627|ref|XP_003296016.1| (hypothetical protein PTT_04394 [Pyrenophora teres f. teres 0-1] >gi|311332185|gb|EFQ95893.1| hypothetical protein PTT_04394 [Pyrenophora teres f. teres 0-1]) HSP 1 Score: 130.183 bits (326), Expect = 5.774e-30 Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 0 Query: 340 ANYRPNHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQ 493 NYR +++ W+ + + +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A P R N AA ++ AV P G+ Q Sbjct: 72 GNYR------DILNTYWQQQ---VTKLETDEHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALSKSDMFDFLIDIVPREEAHPHKRSAGQN---AAVQSSAAVVPPGGMAQ 208
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|189190550|ref|XP_001931614.1| (nuclear transcription factor Y subunit C-3 [Pyrenophora tritici-repentis Pt-1C-BFP] >gi|187973220|gb|EDU40719.1| nuclear transcription factor Y subunit C-3 [Pyrenophora tritici-repentis Pt-1C-BFP]) HSP 1 Score: 130.183 bits (326), Expect = 6.018e-30 Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 0 Query: 340 ANYRPNHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQ 493 NYR +++ W+ + + +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A P R N AA ++ AV P G+ Q Sbjct: 72 GNYR------DILNTYWQQQ---VTKLETDEHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALSKSDMFDFLIDIVPREEAHPHKRSAGQN---AAVQSSAAVVPPGGMAQ 208
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|550809565|gb|ERT01478.1| (transcriptional activator HAP5 [Sporothrix schenckii ATCC 58251]) HSP 1 Score: 129.798 bits (325), Expect = 7.178e-30 Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 0 Query: 351 VVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKAN 473 ++ W+ IN +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A +RG +N Sbjct: 71 ILTTYWQQ---TINHLESDTHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALAKSDMFDFLIDIVPREEATSHPKRGSSN 185
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|748542636|gb|KIH92940.1| (hypothetical protein SPBR_02861 [Sporothrix brasiliensis 5110]) HSP 1 Score: 129.413 bits (324), Expect = 7.999e-30 Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 0 Query: 351 VVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKAN 473 ++ W+ IN +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A +RG +N Sbjct: 62 ILTTYWQQ---TINHLESDTHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALAKSDMFDFLIDIVPREEATSHPKRGSSN 176
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|1029186717|gb|OAL51282.1| (histone-fold-containing protein [Pyrenochaeta sp. DS3sAY3a]) HSP 1 Score: 129.413 bits (324), Expect = 9.276e-30 Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 0 Query: 340 ANYRPNHCIEHVVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQ 493 NYR +++ W+ + + +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A P R N AA ++ AV P G+ Q Sbjct: 71 GNYR------DILNTYWQQQ---VTKLETDEHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALSKSDMFDFLIDIVPREEAHPHKRSAGQN---AAVQSSAAVVPPGGMPQ 207
BLAST of EWM25398.1 vs. NCBI_GenBank
Match: gi|640921902|gb|KDN66225.1| (putative histone-like transcription factor and archaeal histone [Colletotrichum sublineola]) HSP 1 Score: 129.028 bits (323), Expect = 9.376e-30 Identity = 68/165 (41.21%), Postives = 97/165 (58.79%), Query Frame = 0 Query: 351 VVDKVWRSEGVKINDIEPSRTDFKLQELPLARVKKVMKQDDEIEGISRFLVSMEALIIMAKACELFVNELTLRGWHMTEENRRRTLQRMHLAQAMIKCEMFDFLIDIVPRDQAVPAVRRGKANWADAATEAEEAVSGPVGVVQSGN----GQREAVREVAKHSDA 511 ++ W+ IN +E D+KL +LPLAR+KKVMK D E++ ++S EA I+ AK C++F+ ELT+R W EEN+RRTLQR +A A+ K +MFDFLIDIVPR++A +R A +A P GV N GQ ++++ A HS + Sbjct: 63 ILTTYWQQ---TINHLESDNHDYKLHQLPLARIKKVMKADPEVK-----MISAEAPILFAKGCDIFITELTMRAWIHAEENKRRTLQRSDIASALAKSDMFDFLIDIVPREEASSHAKR----------TAGQAAPAPQGVPAQTNSQIPGQHGSLQQSANHSSS 209 The following BLAST results are available for this feature:
BLAST of EWM25398.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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