EWM25351.1, cds5271 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|585107112|gb|EWM25351.1| (Protein of unknown function DUF1003 [Nannochloropsis gaditana]) HSP 1 Score: 2036.54 bits (5275), Expect = 0.000e+0 Identity = 991/991 (100.00%), Postives = 991/991 (100.00%), Query Frame = 0 Query: 1 MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTEEDIPSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEGLITKMAVQQGQVPDTGASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAKRAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEPADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHRIDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPLDSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSESSNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSEVRGHLHHESRTVAGRISKNKKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNGDDTIKHYPWNLMSYDDYNDTPFVRKNLSDQSACQMKVEF 991 MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTEEDIPSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEGLITKMAVQQGQVPDTGASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAKRAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEPADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHRIDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPLDSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSESSNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSEVRGHLHHESRTVAGRISKNKKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNGDDTIKHYPWNLMSYDDYNDTPFVRKNLSDQSACQMKVEF Sbjct: 1 MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTEEDIPSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEGLITKMAVQQGQVPDTGASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAKRAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEPADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHRIDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPLDSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSESSNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSEVRGHLHHESRTVAGRISKNKKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNGDDTIKHYPWNLMSYDDYNDTPFVRKNLSDQSACQMKVEF 991
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|654092170|ref|WP_027715871.1| (DUF1003 domain-containing protein [Desulfuromonas sp. TF]) HSP 1 Score: 171.4 bits (433), Expect = 1.357e-44 Identity = 85/176 (48.30%), Postives = 117/176 (66.48%), Query Frame = 0 Query: 59 RHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN---ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLL 231 R+ G R ++ LE EK E L+++V S E + ++ D QFE K +F R+AD +A++GGSW F+ FAGF++LWV +N +L P FDPYPFILLNL LSC++ QAP+IMMSQNRQ RDR +S+ RVNL+AEL RH+N K+D L++ W+RL E Q + L+ Sbjct: 57 RYRG---RHIQSLLEAEKGELTALEQEVLDSMMRQETLSSNIDAQFERKLTFGERLADRIADIGGSWSFILTFAGFLLLWVAVNSFVLLRRP--FDPYPFILLNLILSCLAAIQAPIIMMSQNRQEARDRLRSENDYRVNLKAELEIRHLNEKIDHLLSRQWERLVEIQQVQLELM 227
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|760093717|ref|WP_043776022.1| (DUF1003 domain-containing protein [Desulfomicrobium escambiense]) HSP 1 Score: 171.4 bits (433), Expect = 1.503e-44 Identity = 79/169 (46.75%), Postives = 113/169 (66.86%), Query Frame = 0 Query: 66 RGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234 R L + LEEEK E RL+EDV S + +++ ++ + ++ + R+AD +A+ GGSW+F+ FAG +++W+ N AFDPYPFILLNL LSC++ QAPVIMMSQNRQ +DR +S+ +VNL+AEL +H+N K+D L+T W+RL E Q L L+E L Sbjct: 60 RFLAEMLEEEKGELTRLEEDVLRSLRDQDLLSSNINEEYSESLTMGERLADRLADFGGSWKFILIFAGTLVVWICWNAYQAAQAFDPYPFILLNLVLSCLAALQAPVIMMSQNRQEAKDRLRSENDYQVNLKAELEIKHLNEKVDHLLTRQWQRLLEIQDLQVQLIEDL 228
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|488726715|ref|WP_002650159.1| (hypothetical protein [Blastopirellula marina] >gi|87290429|gb|EAQ82317.1| hypothetical protein DSM3645_01345 [Blastopirellula marina DSM 3645]) HSP 1 Score: 170.244 bits (430), Expect = 3.285e-44 Identity = 82/170 (48.24%), Postives = 117/170 (68.82%), Query Frame = 0 Query: 68 LKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN---ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234 ++QSLE E+ E L++ V S +HE++ + D +FE K+S R+AD VA GGSW F+ F +++W+ +N +L+ P FDP+PFILLNL LSC++ QAPVIMMSQNRQ +DR ++++ RVNL+AEL RH+++KLD L+T W+RL E Q L T LLE + Sbjct: 62 VQQSLETERGELSVLEDQVVESLRQHEILAENPDEEFEEKKSLGQRLADRVASFGGSWTFILLFGAVLVVWIALNSIALLTKP--FDPFPFILLNLVLSCLAAIQAPVIMMSQNRQEAKDRLRAEHDYRVNLKAELEIRHLHSKLDLLLTHQWQRLLEIQQLQTDLLEEI 229
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1142776236|ref|WP_077022888.1| (DUF1003 domain-containing protein [Fuerstia marisgermanicae] >gi|1140106522|gb|APZ91079.1| putative membrane protein [Fuerstia marisgermanicae]) HSP 1 Score: 167.548 bits (423), Expect = 2.451e-43 Identity = 79/164 (48.17%), Postives = 110/164 (67.07%), Query Frame = 0 Query: 72 LEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN-ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234 L EEK E L+ DV S EHE++ + + + + + + R+AD VA GGSW F+ FF G +++W+ +N I +FDPYPFILLNL LSC++ QAPVIMMSQNRQ ++DR +++ RVNL++EL RH+++KLD L+T W RL E Q + T LLE L Sbjct: 61 LTEEKGELTSLERDVVESLREHEILSQNLNTEIDDESTVGQRLADHVASFGGSWTFILFFGGVLVVWITVNSIAMLGKSFDPYPFILLNLVLSCLAALQAPVIMMSQNRQEIKDRLRAENDYRVNLKSELEIRHLHSKLDLLLTHQWHRLLEIQQVQTDLLEEL 224
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1180010731|ref|WP_083533085.1| (DUF1003 domain-containing protein [Bosea sp. WAO]) HSP 1 Score: 164.466 bits (415), Expect = 1.224e-41 Identity = 86/201 (42.79%), Postives = 121/201 (60.20%), Query Frame = 0 Query: 66 RGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTE 266 R +++ L EE EY L +V S A + + + D +F+ K+SF RV+D +A GGSW F+ F +++W+++NI GP AFD YPFILLNL LSC++ QAP+IMMSQ RQ +DR +S +VNL+AEL RH++ K+D LIT W+RL E Q + +++ Q L KAA G R K K +P E Sbjct: 73 RYVEEILREEHGEYSDLDREVVESIARQDTIASDTDDEFDEKRSFGERVSDGLASFGGSWAFLISFGCVLVVWMLVNIAEGPGAFDAYPFILLNLVLSCIAAIQAPIIMMSQKRQEQKDRARSSNDYQVNLKAELEIRHLHEKIDHLITKQWQRLAEIQQVQLEMMQET--QRDQARKLAKAAAGKRKGPR-KPKGSEPPE 270
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1083015875|gb|OGD18245.1| (hypothetical protein A2Y69_01530 [Candidatus Aminicenantes bacterium RBG_13_59_9]) HSP 1 Score: 162.54 bits (410), Expect = 1.623e-41 Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 0 Query: 62 GEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN---ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234 G ++ +K++LEEEK E L+E+V S E E + R++E +F R+AD +A GGSW+F+ F G + W++IN +LS P FDP+PFILLNL LSC++ FQAPVIMMSQNRQ +DR +S++ RVNL+AEL R+++ KLD + W+ L E Q + L+ L Sbjct: 57 GYRMQFIKKTLEEEKGELTALEEEVVQSIREQETVSRDIHREYEEHLTFGQRMADHLATYGGSWKFILTFLGVLFCWIIINSVLLLSKP--FDPFPFILLNLVLSCLAAFQAPVIMMSQNRQDAKDRLRSEHDYRVNLKAELEIRYLHQKLDHFLKKEWQTLLEIQEIQIDLMNEL 230
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1084713667|gb|OGP58916.1| (hypothetical protein A2V67_20760 [Deltaproteobacteria bacterium RBG_13_61_14]) HSP 1 Score: 162.54 bits (410), Expect = 2.107e-41 Identity = 78/162 (48.15%), Postives = 108/162 (66.67%), Query Frame = 0 Query: 72 LEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN-ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLE 232 LE EK E L+E+V +S E E++ + + +F+ K + + AD +AE GGSW F+G FAG +++W++IN I FDPYP+ILLNL LSC++ QAPVIMMSQNRQ RDR +++ VNL+AEL R +NAKLD L+ W+RL E Q + L+E Sbjct: 59 LETEKGELSALEEEVVSSMKEPEIISKNVNLEFDRKLTLGEQAADRIAEFGGSWGFIGIFAGVILVWIIINSIALAMRPFDPYPYILLNLVLSCLAAMQAPVIMMSQNRQEARDRLGAEHDYAVNLKAELEIRQLNAKLDQLLNHQWQRLLEIQRIQMELME 220
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1125444267|gb|OLD71278.1| (hypothetical protein AUF68_10565 [Verrucomicrobia bacterium 13_1_20CM_54_28] >gi|1125490242|gb|OLE12435.1| hypothetical protein AUG52_03790 [Verrucomicrobia bacterium 13_1_20CM_3_54_17]) HSP 1 Score: 160.229 bits (404), Expect = 1.099e-40 Identity = 76/168 (45.24%), Postives = 111/168 (66.07%), Query Frame = 0 Query: 68 LKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINI-LSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234 +K+ L++E E L ++V S +HE++ + ++QFE K +F R++D +AE GGSW+F+ F + +W+ NI L AFDPYPFILLNL LSC++ QAPVIMMSQNR RDR +++ +VNL+AEL RH++ K+D L+ + RLFE Q + LLE + Sbjct: 63 VKEVLQDEIGELSALDQEVIESLEQHEILSSDIEKQFEKKLTFGERLSDRIAEFGGSWKFLITFGAVIFVWIAANIALLATRAFDPYPFILLNLILSCLAAVQAPVIMMSQNRAEARDRLRAENDYKVNLKAELEIRHLHEKIDHLLRRQYNRLFEIQQIQIELLEEI 230
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1079637754|emb|SCW91047.1| (Uncharacterized membrane protein [Ancylobacter rudongensis]) HSP 1 Score: 160.229 bits (404), Expect = 1.131e-40 Identity = 76/164 (46.34%), Postives = 108/164 (65.85%), Query Frame = 0 Query: 71 SLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234 +L+ E+ + L DV S A ++++ + + + E+ +SF R ADA+A GGSW F+ F F+ LW+ +NI AFDPYPFILLNL LSC++ QAPVIMMSQ RQ +DR +S+ RVNL+AEL RH++ K+D ++T W+RL E QA+ L+E L Sbjct: 72 TLKAERGDLSELDHDVIASLAANDILTENIEDEIESGRSFGERAADAIASFGGSWTFIISFMVFINLWMALNIAGLMGAFDPYPFILLNLVLSCVAALQAPVIMMSQKRQEAKDRRRSENDYRVNLKAELEIRHLHEKIDHMLTRQWERLAEIQAIQIELMEDL 235 The following BLAST results are available for this feature:
BLAST of EWM25351.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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