EWM25351.1, cds5271 (CDS) Nannochloropsis gaditana

Overview
NameEWM25351.1
Unique Namecds5271
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:616250..619106 -
Alignment locationCM002465.1:616043..616161 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25351.1
ProductProtein of unknown function DUF1003
Orig transcript idgnl|cribi|Naga_100005g76.6645.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:616250..619106 -
CM002465.1supercontigCM002465.1:616043..616161 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010406DUF1003
Homology
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|585107112|gb|EWM25351.1| (Protein of unknown function DUF1003 [Nannochloropsis gaditana])

HSP 1 Score: 2036.54 bits (5275), Expect = 0.000e+0
Identity = 991/991 (100.00%), Postives = 991/991 (100.00%), Query Frame = 0
Query:    1 MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTEEDIPSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEGLITKMAVQQGQVPDTGASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAKRAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEPADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHRIDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPLDSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSESSNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSEVRGHLHHESRTVAGRISKNKKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNGDDTIKHYPWNLMSYDDYNDTPFVRKNLSDQSACQMKVEF 991
            MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTEEDIPSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEGLITKMAVQQGQVPDTGASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAKRAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEPADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHRIDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPLDSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSESSNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSEVRGHLHHESRTVAGRISKNKKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNGDDTIKHYPWNLMSYDDYNDTPFVRKNLSDQSACQMKVEF
Sbjct:    1 MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTEEDIPSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEGLITKMAVQQGQVPDTGASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAKRAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEPADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHRIDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPLDSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSESSNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSEVRGHLHHESRTVAGRISKNKKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNGDDTIKHYPWNLMSYDDYNDTPFVRKNLSDQSACQMKVEF 991          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|654092170|ref|WP_027715871.1| (DUF1003 domain-containing protein [Desulfuromonas sp. TF])

HSP 1 Score: 171.4 bits (433), Expect = 1.357e-44
Identity = 85/176 (48.30%), Postives = 117/176 (66.48%), Query Frame = 0
Query:   59 RHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN---ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLL 231
            R+ G   R ++  LE EK E   L+++V  S    E + ++ D QFE K +F  R+AD +A++GGSW F+  FAGF++LWV +N   +L  P  FDPYPFILLNL LSC++  QAP+IMMSQNRQ  RDR +S+   RVNL+AEL  RH+N K+D L++  W+RL E Q +   L+
Sbjct:   57 RYRG---RHIQSLLEAEKGELTALEQEVLDSMMRQETLSSNIDAQFERKLTFGERLADRIADIGGSWSFILTFAGFLLLWVAVNSFVLLRRP--FDPYPFILLNLILSCLAAIQAPIIMMSQNRQEARDRLRSENDYRVNLKAELEIRHLNEKIDHLLSRQWERLVEIQQVQLELM 227          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|760093717|ref|WP_043776022.1| (DUF1003 domain-containing protein [Desulfomicrobium escambiense])

HSP 1 Score: 171.4 bits (433), Expect = 1.503e-44
Identity = 79/169 (46.75%), Postives = 113/169 (66.86%), Query Frame = 0
Query:   66 RGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234
            R L + LEEEK E  RL+EDV  S  + +++ ++ + ++    +   R+AD +A+ GGSW+F+  FAG +++W+  N      AFDPYPFILLNL LSC++  QAPVIMMSQNRQ  +DR +S+   +VNL+AEL  +H+N K+D L+T  W+RL E Q L   L+E L
Sbjct:   60 RFLAEMLEEEKGELTRLEEDVLRSLRDQDLLSSNINEEYSESLTMGERLADRLADFGGSWKFILIFAGTLVVWICWNAYQAAQAFDPYPFILLNLVLSCLAALQAPVIMMSQNRQEAKDRLRSENDYQVNLKAELEIKHLNEKVDHLLTRQWQRLLEIQDLQVQLIEDL 228          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|488726715|ref|WP_002650159.1| (hypothetical protein [Blastopirellula marina] >gi|87290429|gb|EAQ82317.1| hypothetical protein DSM3645_01345 [Blastopirellula marina DSM 3645])

HSP 1 Score: 170.244 bits (430), Expect = 3.285e-44
Identity = 82/170 (48.24%), Postives = 117/170 (68.82%), Query Frame = 0
Query:   68 LKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN---ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234
            ++QSLE E+ E   L++ V  S  +HE++  + D +FE K+S   R+AD VA  GGSW F+  F   +++W+ +N   +L+ P  FDP+PFILLNL LSC++  QAPVIMMSQNRQ  +DR ++++  RVNL+AEL  RH+++KLD L+T  W+RL E Q L T LLE +
Sbjct:   62 VQQSLETERGELSVLEDQVVESLRQHEILAENPDEEFEEKKSLGQRLADRVASFGGSWTFILLFGAVLVVWIALNSIALLTKP--FDPFPFILLNLVLSCLAAIQAPVIMMSQNRQEAKDRLRAEHDYRVNLKAELEIRHLHSKLDLLLTHQWQRLLEIQQLQTDLLEEI 229          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1142776236|ref|WP_077022888.1| (DUF1003 domain-containing protein [Fuerstia marisgermanicae] >gi|1140106522|gb|APZ91079.1| putative membrane protein [Fuerstia marisgermanicae])

HSP 1 Score: 167.548 bits (423), Expect = 2.451e-43
Identity = 79/164 (48.17%), Postives = 110/164 (67.07%), Query Frame = 0
Query:   72 LEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN-ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234
            L EEK E   L+ DV  S  EHE++  + + + + + +   R+AD VA  GGSW F+ FF G +++W+ +N I     +FDPYPFILLNL LSC++  QAPVIMMSQNRQ ++DR +++   RVNL++EL  RH+++KLD L+T  W RL E Q + T LLE L
Sbjct:   61 LTEEKGELTSLERDVVESLREHEILSQNLNTEIDDESTVGQRLADHVASFGGSWTFILFFGGVLVVWITVNSIAMLGKSFDPYPFILLNLVLSCLAALQAPVIMMSQNRQEIKDRLRAENDYRVNLKSELEIRHLHSKLDLLLTHQWHRLLEIQQVQTDLLEEL 224          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1180010731|ref|WP_083533085.1| (DUF1003 domain-containing protein [Bosea sp. WAO])

HSP 1 Score: 164.466 bits (415), Expect = 1.224e-41
Identity = 86/201 (42.79%), Postives = 121/201 (60.20%), Query Frame = 0
Query:   66 RGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHFSHAGSRSKGKMEDPTE 266
            R +++ L EE  EY  L  +V  S A  + + +  D +F+ K+SF  RV+D +A  GGSW F+  F   +++W+++NI  GP AFD YPFILLNL LSC++  QAP+IMMSQ RQ  +DR +S    +VNL+AEL  RH++ K+D LIT  W+RL E Q +   +++       Q   L KAA     G R K K  +P E
Sbjct:   73 RYVEEILREEHGEYSDLDREVVESIARQDTIASDTDDEFDEKRSFGERVSDGLASFGGSWAFLISFGCVLVVWMLVNIAEGPGAFDAYPFILLNLVLSCIAAIQAPIIMMSQKRQEQKDRARSSNDYQVNLKAELEIRHLHEKIDHLITKQWQRLAEIQQVQLEMMQET--QRDQARKLAKAAAGKRKGPR-KPKGSEPPE 270          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1083015875|gb|OGD18245.1| (hypothetical protein A2Y69_01530 [Candidatus Aminicenantes bacterium RBG_13_59_9])

HSP 1 Score: 162.54 bits (410), Expect = 1.623e-41
Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 0
Query:   62 GEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN---ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234
            G  ++ +K++LEEEK E   L+E+V  S  E E +     R++E   +F  R+AD +A  GGSW+F+  F G +  W++IN   +LS P  FDP+PFILLNL LSC++ FQAPVIMMSQNRQ  +DR +S++  RVNL+AEL  R+++ KLD  +   W+ L E Q +   L+  L
Sbjct:   57 GYRMQFIKKTLEEEKGELTALEEEVVQSIREQETVSRDIHREYEEHLTFGQRMADHLATYGGSWKFILTFLGVLFCWIIINSVLLLSKP--FDPFPFILLNLVLSCLAAFQAPVIMMSQNRQDAKDRLRSEHDYRVNLKAELEIRYLHQKLDHFLKKEWQTLLEIQEIQIDLMNEL 230          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1084713667|gb|OGP58916.1| (hypothetical protein A2V67_20760 [Deltaproteobacteria bacterium RBG_13_61_14])

HSP 1 Score: 162.54 bits (410), Expect = 2.107e-41
Identity = 78/162 (48.15%), Postives = 108/162 (66.67%), Query Frame = 0
Query:   72 LEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVIN-ILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLE 232
            LE EK E   L+E+V +S  E E++  + + +F+ K +   + AD +AE GGSW F+G FAG +++W++IN I      FDPYP+ILLNL LSC++  QAPVIMMSQNRQ  RDR  +++   VNL+AEL  R +NAKLD L+   W+RL E Q +   L+E
Sbjct:   59 LETEKGELSALEEEVVSSMKEPEIISKNVNLEFDRKLTLGEQAADRIAEFGGSWGFIGIFAGVILVWIIINSIALAMRPFDPYPYILLNLVLSCLAAMQAPVIMMSQNRQEARDRLGAEHDYAVNLKAELEIRQLNAKLDQLLNHQWQRLLEIQRIQMELME 220          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1125444267|gb|OLD71278.1| (hypothetical protein AUF68_10565 [Verrucomicrobia bacterium 13_1_20CM_54_28] >gi|1125490242|gb|OLE12435.1| hypothetical protein AUG52_03790 [Verrucomicrobia bacterium 13_1_20CM_3_54_17])

HSP 1 Score: 160.229 bits (404), Expect = 1.099e-40
Identity = 76/168 (45.24%), Postives = 111/168 (66.07%), Query Frame = 0
Query:   68 LKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINI-LSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234
            +K+ L++E  E   L ++V  S  +HE++ +  ++QFE K +F  R++D +AE GGSW+F+  F   + +W+  NI L    AFDPYPFILLNL LSC++  QAPVIMMSQNR   RDR +++   +VNL+AEL  RH++ K+D L+   + RLFE Q +   LLE +
Sbjct:   63 VKEVLQDEIGELSALDQEVIESLEQHEILSSDIEKQFEKKLTFGERLSDRIAEFGGSWKFLITFGAVIFVWIAANIALLATRAFDPYPFILLNLILSCLAAVQAPVIMMSQNRAEARDRLRAENDYKVNLKAELEIRHLHEKIDHLLRRQYNRLFEIQQIQIELLEEI 230          
BLAST of EWM25351.1 vs. NCBI_GenBank
Match: gi|1079637754|emb|SCW91047.1| (Uncharacterized membrane protein [Ancylobacter rudongensis])

HSP 1 Score: 160.229 bits (404), Expect = 1.131e-40
Identity = 76/164 (46.34%), Postives = 108/164 (65.85%), Query Frame = 0
Query:   71 SLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERL 234
            +L+ E+ +   L  DV  S A ++++  + + + E+ +SF  R ADA+A  GGSW F+  F  F+ LW+ +NI     AFDPYPFILLNL LSC++  QAPVIMMSQ RQ  +DR +S+   RVNL+AEL  RH++ K+D ++T  W+RL E QA+   L+E L
Sbjct:   72 TLKAERGDLSELDHDVIASLAANDILTENIEDEIESGRSFGERAADAIASFGGSWTFIISFMVFINLWMALNIAGLMGAFDPYPFILLNLVLSCVAALQAPVIMMSQKRQEAKDRRRSENDYRVNLKAELEIRHLHEKIDHMLTRQWERLAEIQAIQIELMEDL 235          
The following BLAST results are available for this feature:
BLAST of EWM25351.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107112|gb|EWM25351.1|0.000e+0100.00Protein of unknown function DUF1003 [Nannochlorops... [more]
gi|654092170|ref|WP_027715871.1|1.357e-4448.30DUF1003 domain-containing protein [Desulfuromonas ... [more]
gi|760093717|ref|WP_043776022.1|1.503e-4446.75DUF1003 domain-containing protein [Desulfomicrobiu... [more]
gi|488726715|ref|WP_002650159.1|3.285e-4448.24hypothetical protein [Blastopirellula marina] >gi|... [more]
gi|1142776236|ref|WP_077022888.1|2.451e-4348.17DUF1003 domain-containing protein [Fuerstia marisg... [more]
gi|1180010731|ref|WP_083533085.1|1.224e-4142.79DUF1003 domain-containing protein [Bosea sp. WAO][more]
gi|1083015875|gb|OGD18245.1|1.623e-4145.45hypothetical protein A2Y69_01530 [Candidatus Amini... [more]
gi|1084713667|gb|OGP58916.1|2.107e-4148.15hypothetical protein A2V67_20760 [Deltaproteobacte... [more]
gi|1125444267|gb|OLD71278.1|1.099e-4045.24hypothetical protein AUF68_10565 [Verrucomicrobia ... [more]
gi|1079637754|emb|SCW91047.1|1.131e-4046.34Uncharacterized membrane protein [Ancylobacter rud... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5284rna5284Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications