EWM25402.1, cds5253 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|585107163|gb|EWM25402.1| (proteasome component domain protein [Nannochloropsis gaditana]) HSP 1 Score: 908.672 bits (2347), Expect = 0.000e+0 Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query: 1 MGRSLEGLPRLRRKATVGSRLPSVEMPADSASVSSEPSSLLSIVDRTAYDRLIKSIADALPESTRSQFRDEAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAAEYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKKGARTQASRVQESQQYVRSSHSN 449
MGRSLEGLPRLRRKATVGSRLPSVEMPADSASVSSEPSSLLSIVDRTAYDRLIKSIADALPESTRSQFRDEAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAAEYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKKGARTQASRVQESQQYVRSSHSN
Sbjct: 1 MGRSLEGLPRLRRKATVGSRLPSVEMPADSASVSSEPSSLLSIVDRTAYDRLIKSIADALPESTRSQFRDEAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAAEYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKKGARTQASRVQESQQYVRSSHSN 449
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|298714519|emb|CBJ27541.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 279.641 bits (714), Expect = 1.334e-86 Identity = 153/377 (40.58%), Postives = 228/377 (60.48%), Query Frame = 0
Query: 51 RLIKSIADALPESTRSQFRDEAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPED-LPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAAEYEEIPYEAVSATLQVPHED-VESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLRE 425
+L++++A A+P S ++QF A A LI +L Q VI+ D+EG + +L SLL + +P+ +P + +I + + V+D+ LRLKL+ N YN+L T+ + +VLL++I YA++ K + +LS FFA +++W K W LS D+R+LYLL+S+TL GK E+Q FL+KYLAT+ V A AV+G IGAV+ P+ + +LL + AV +L +DP + AVHELL IF KL + + ++N L N + + MRLLSL LA E+EEIPY+ V+ TLQV +D VE WV++AI L+EAKMDQ Q VV++ R ++R F W LQ KL W NV +LL ++++
Sbjct: 19 KLVEAVAKAMP-SGQAQFSKACTALITNANAPDLIRKVLEQRNVILEMSKTDDVEGCFGILFSLLFKTDNPKAAVPALSMEIATKVLEKVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYAKEAKLVAMLSSFFAGVDDWIKGW-ELSVADQRRLYLLISDTLGSEGKAVESQKFLMKYLATYDGATTAELAEVKAA-AVRGCIGAVKSPIVSFTEQHNLLGMAAVTQLKADPKYSAVHELLHIFSVEKLGEYMAFHEKNAKTLADNKIDHDSCVSSMRLLSLCSLATEHEEIPYQVVADTLQVSGDDEVEDWVLQAIQTGLMEAKMDQMQRVVVIRRCTNRVFGPAQWKTLQMKLGTWSANVQTLLSAIQK 392
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|22330807|ref|NP_186869.2| (Proteasome component (PCI) domain protein [Arabidopsis thaliana] >gi|17065292|gb|AAL32800.1| Unknown protein [Arabidopsis thaliana] >gi|20259990|gb|AAM13342.1| unknown protein [Arabidopsis thaliana] >gi|332640257|gb|AEE73778.1| Proteasome component (PCI) domain protein [Arabidopsis thaliana] >gi|1032291037|gb|OAP05364.1| hypothetical protein AXX17_AT3G01390 [Arabidopsis thaliana]) HSP 1 Score: 214.927 bits (546), Expect = 1.525e-61 Identity = 135/381 (35.43%), Postives = 215/381 (56.43%), Query Frame = 0
Query: 57 ADALPESTRSQFRDEAKECTDYARARKLIEL---ILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLA-GSGKVAEAQLFLIKYLATFRETDPG-LDTPVTVALAVKGVIGAVREPLNALRSAS----DLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKK 427
ADA PE+ + +E + A K +EL ++ + ++ ++ +EKD+E +Y ++ S++ PE + MV I S + DK SLRLK+L N YNL+ + RFQV + + A D K + + F ++N+ K W ++ +D+R+L+L ++ L V E+ FL KYLATF D LD + AVR + ++++S DLL LPAV +L D + V++LL+IF +L TE+++ N G L++ G+ E MRLLSL LA+ E +IPY ++ TLQV +DVE W+V+AITA+L+E KMDQ +V++V+R+S R F + W L+ KL W+ N+SS++ ++ K
Sbjct: 26 ADAGPEAAEPEITRLCREAEESMVAEKWLELSSLMVTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLKILFNLYNLVDHPYA-RFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEW-NIDIKDQRELFLAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLD---------EAKEEAVRAVIEFVKASSIFQCDLLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVSRSSEREFGTKQWQSLRTKLATWKDNISSIITTIESNK 395
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|1124040729|ref|XP_019578437.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like, partial [Rhinolophus sinicus]) HSP 1 Score: 212.616 bits (540), Expect = 2.636e-61 Identity = 130/361 (36.01%), Postives = 213/361 (59.00%), Query Frame = 0
Query: 84 LIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQL-FLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKKGAR--TQASRVQESQ 440
L L++ + ++ ++ ++KD+E +Y ++ SL+ ++ PE++ MV I S + DK SLRLK+L N YNLL + RFQV + +E A + K D + F ++++ K W ++ +D+R+L+L ++ L + +A+ L F+ KYLATF D + + AV+ VI V+ P DLL +PAV +L DP + V++LL+IF +L E+++ N G+L+ + E MRLLSL LA+ E +IPY ++ +TLQV E+VE WVV+AITA+L++ KMDQ +VV+V+R + R F + W L+ KL WR N+++++ +++ K TQAS E+Q
Sbjct: 1 LATLMVTSADLVSSKISDKDLECTYTIICSLVKNVNSPEEVLEMVKAITSKVVQHPSDKASLRLKILYNLYNLLDHPNA-RFQVYMKALELAVNGKVTDYIVPSFKKIDSFLKEW-NIDMKDQRELFLAIANVLRENKSLAKESLQFVTKYLATFSNEDTQVLSEAKEE-AVRAVIEFVKAPS---IFQCDLLEMPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGLLQTYELVEEDCVAKMRLLSLVDLASDESGKIPYASIKSTLQVNDEEVELWVVKAITAKLVDCKMDQMNQVVIVSRCAEREFGQKQWQSLRTKLAAWRDNIANVISTIQANKATEEGTQASSSSETQ 355
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|297828662|ref|XP_002882213.1| (eukaryotic translation initiation factor 3 subunit M [Arabidopsis lyrata subsp. lyrata] >gi|297328053|gb|EFH58472.1| proteasome family protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 213.386 bits (542), Expect = 7.015e-61 Identity = 132/376 (35.11%), Postives = 213/376 (56.65%), Query Frame = 0
Query: 57 ADALPESTRSQFRDEAKECTDYARARKLIEL---ILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLA-GSGKVAEAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKK 427
ADA PE+ + +E + K +EL ++ + ++ ++ +EKD+E +Y ++ S++ ++ PED+ +V I S + DK SLRLK+L N YNL+ + RFQV + + A D K + + F ++N+ K W ++ +D+R+L+L ++ L V E+ FL KYLATF D + AV+ VI V+ + DLL LPAV +L D + V++LL+IF +L TE+++ NP L++ G+ E MRLLSL LA+ E +IPY ++ LQV EDVE W+V+AITA+L++ KMDQ +VV+V+R+S R F + W L+ KL W+ N+S+++ ++ K
Sbjct: 26 ADAGPEAAEPEITRLCREAEESIVKEKWLELSTLMVTSAELVSSKISEKDLECTYTIICSIVKKVESPEDVLAIVKAIASEVAQQPSDKASLRLKILFNLYNLVDHPYA-RFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEW-NIDIKDQRELFLAIANVLKENKSLVNESLKFLTKYLATFSNEDTQVLDEAKEE-AVRAVIEFVKA---STIFQCDLLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANPEFLQSYGLADEDCVSKMRLLSLVDLASDESGKIPYASIKDALQVNEEDVELWIVKAITAKLIDCKMDQMNQVVIVSRSSEREFGTKQWQSLRTKLATWKDNISNIITTIESNK 395
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|567174274|ref|XP_006400084.1| (hypothetical protein EUTSA_v10013660mg [Eutrema salsugineum] >gi|557101174|gb|ESQ41537.1| hypothetical protein EUTSA_v10013660mg [Eutrema salsugineum]) HSP 1 Score: 212.616 bits (540), Expect = 1.365e-60 Identity = 135/376 (35.90%), Postives = 216/376 (57.45%), Query Frame = 0
Query: 57 ADALPESTRSQFR---DEAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQL-FLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKK 427
ADA PE+ Q EA+E R L L++ + ++ ++ +EKD+E +Y ++ SL+ PE++ MV I S + DK SL LK+L N YNLL + RFQV + +E A + K + + F ++++ K W ++ D+R+L+L ++ L + +A+ L F+ KYLATF + D + + AV+ VI VR P N + DLL +PAV +L DP + V++LL+IF +L E+++ N G L+ G+ E MRLLSL LA+ E +IPY ++ TLQV E++E WVV+AITA+L++ KMDQ +VV+V+R++ R F + W L+ KL WR N+ +++ +++ K
Sbjct: 26 ADAGPEAAEPQVTRLCSEAEESIVAGRWLDLATLMVTSADLVSSKISEKDLECTYTIICSLVKNAKSPEEVLEMVKAIASKVVQQPNDKASLLLKILFNLYNLLDHPNA-RFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEW-NIDINDQRKLFLAIANVLRENKSLAKDSLEFVTKYLATFSDEDTQVLSEAKEE-AVRAVIEFVRAP-NKFQC--DLLEMPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLIEEDCLAKMRLLSLVDLASNESGKIPYASIKNTLQVNDEEIELWVVKAITAKLVDCKMDQMNQVVIVSRSAEREFGQKQWQSLRIKLAAWRDNIENVISTIQANK 395
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|645249795|ref|XP_008230907.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Prunus mume]) HSP 1 Score: 211.075 bits (536), Expect = 4.161e-60 Identity = 146/409 (35.70%), Postives = 225/409 (55.01%), Query Frame = 0
Query: 34 SSEPSSLLSIVDRTAYDRLIKSIADALPESTRSQFR---DEAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVA-EAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKKGARTQASRVQ 437
+SE LS+V T+ S ADA PE Q EA+EC AR L+ L+L + VI+++ +EKD+E + V+ +++ + P++ M I + + DKP+LRLK+L N YNLL++ S RF V L + A + K + + F +E++ K W ++ DERQL+L +S L +A E+ FL KYLATF D + + AV+ ++ V+ P + + DLL +PAV +L D H ++LL+IF +L E++ N +L+ G+ E MRL+SL L + E IPY + TLQ+ E VE WVV+AITA+L++ KMDQ +VV+V+R + R F Q WL L+ KL WR NV++++ ++R + A + VQ
Sbjct: 7 TSEEDPALSVVRFTSE----LSWADAGPEVAEPQVSRLCTEAQECMVMARWFDLVSLMLTSADVILSKVSEKDLECIFTVICNVVTKSESPDEALEMAKLISAKITQQPSDKPALRLKILFNLYNLLENPYS-RFFVYLSALNLAINGKVTEHVIPSFKKIESFLKEW-NIGVSDERQLFLTISNVLREHKSLAKESFKFLSKYLATFSGEDAYILSEAKEE-AVRTIVEFVKAP-DLFQC--DLLDMPAVGQLEKDAKHALAYQLLKIFLTQRLDAYLEFQAANSTLLKGYGLVHEDCITKMRLISLVDLGSDESGRIPYNLIRDTLQINDEGVELWVVKAITAKLMDCKMDQMNQVVIVSRCTERVFGQQQWLTLRSKLATWRGNVANVISTIRANRIAEDGSQAVQ 405
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|674244913|gb|KFK37678.1| (hypothetical protein AALP_AA3G014500 [Arabis alpina]) HSP 1 Score: 210.305 bits (534), Expect = 9.002e-60 Identity = 134/376 (35.64%), Postives = 212/376 (56.38%), Query Frame = 0
Query: 57 ADALPESTRSQFRDEAKECTDYARARKLIEL---ILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETL-AGSGKVAEAQLFLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKK 427
ADA PE+ + +E + A K +EL ++ + ++ ++ +EKD+E +Y ++ SL+ ++ PED+ MV I S + DK SLRLK+L N YNLL + RFQV + + A D K + + F ++++ K W ++ +D+R L+L ++ + V E+ FL KYLATF D + A AV+ VI V+ + DLL LPAV +L D + V++LL+IF +L TE+++ N G LE G+ E MRLLSL LA+ E +IPY ++ TLQV E+VE W+V AI+A+L++ KMDQ +VV+V+R S R F + W L+ KL W+ N+++++ ++ K
Sbjct: 26 ADAGPEAAEPEITRLCREAEESIVAGKWLELATLMVTSAELVSSKISEKDLECTYTIICSLVKNVNSPEDVLEMVKAISSKVVQQPSDKASLRLKILFNLYNLLAHPYA-RFQVYMKALALAVDGKVTEFIIPSFKKIDSFLKEW-NVEIKDQRDLFLAIANVVRENKSLVKESLTFLTKYLATFSNEDAQVLDEAKEA-AVRAVIEFVKA---STIFQCDLLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLETYGLVDEDCVTKMRLLSLVDLASDESGKIPYTSIKDTLQVNAEEVELWIVRAISAKLIDCKMDQMNQVVIVSRCSEREFGSKQWQSLRSKLATWKDNITNIISTIESNK 395
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|567204095|ref|XP_006408436.1| (hypothetical protein EUTSA_v10020815mg [Eutrema salsugineum] >gi|557109582|gb|ESQ49889.1| hypothetical protein EUTSA_v10020815mg [Eutrema salsugineum]) HSP 1 Score: 209.92 bits (533), Expect = 1.250e-59 Identity = 143/401 (35.66%), Postives = 224/401 (55.86%), Query Frame = 0
Query: 34 SSEPSSLLSIVDRTAYDRLIKSIADALPESTRSQFRDEAKECTDYARARKLIEL---ILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETL-AGSGKVAEAQLFLIKYLATFRETDPG-LDTPVTVALAVKGVIGAVREPLNALR-SASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKK 427
+SE L++V T+ + ADA PE+ + +E + A K +EL ++ + ++ ++ EKD+E +Y ++ SL+ ++ ED+ MV I S + DK SLRLK+L N YNLL + RFQV + + A D K ++ + F ++N+ K W ++ ++D+R+L+L ++ L V E+ FL KYLATF D LD VA + AV E + A DLL LPAV +L D ++ V++LL+IF +L E+++ N G LE+ G+ E MRLLSL LA+ E +IPY + TLQV E+VE W+V+AITA+L++ KMDQ +VV+V+R S R F + W L+ KL WR N+++++ ++ K
Sbjct: 7 TSEEDPFLAVVRSTSQ----LAWADAGPEAAEPEITRLCREAEESIVAGKWLELASLMVTSAELVSSKIPEKDLECTYTIICSLVKNANNLEDVLEMVKVISSKVVQQPNDKASLRLKILFNLYNLLDHPYA-RFQVYMKALTLAVDGKVIEYIVPSFKKIDNFLKEW-NIDSKDQRELFLAIANVLRENKSLVKESLKFLTKYLATFSNDDAQVLDEAKEVA------VRAVTEFVKASSIFQCDLLDLPAVAQLEKDTKYEPVYQLLKIFLTQRLNAFMEFKNANSGFLESYGLVDEDCVTKMRLLSLVDLASDESGKIPYTLIKDTLQVNEEEVELWIVKAITAKLIDCKMDQMNQVVIVSRCSEREFGSKQWQSLRTKLATWRDNIANIISTIEANK 395
BLAST of EWM25402.1 vs. NCBI_GenBank
Match: gi|727562828|ref|XP_010453700.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit M [Camelina sativa]) HSP 1 Score: 209.534 bits (532), Expect = 1.719e-59 Identity = 135/386 (34.97%), Postives = 215/386 (55.70%), Query Frame = 0
Query: 57 ADALPESTRSQFRD---EAKECTDYARARKLIELILAQSAVIMARPTEKDIEGSYQVLISLLDRLSDPEDLPIMVDKILSNLRASVEDKPSLRLKLLCNFYNLLKSGTSERFQVLLVIIEYARDTKQLDILSDFFADLENWKKNWRHLSAEDERQLYLLVSETLAGSGKVAEAQL-FLIKYLATFRETDPGLDTPVTVALAVKGVIGAVREPLNALRSASDLLSLPAVKRLASDPAHKAVHELLEIFCFGKLADLTEYEDRNPGVLEANGVGREKAFRDMRLLSLSLLAA-EYEEIPYEAVSATLQVPHEDVESWVVEAITARLLEAKMDQEQEVVMVTRASHRHFSHQNWLRLQEKLHVWRQNVSSLLVSLREKKGARTQASRVQ 437
ADA PE Q EA+E R L L++ + ++ + +EKD+E +Y ++ SL+ + PE++ MV I S + +DK SLRLK+L N YNLL + RFQV + +E A + K + + F ++++ K W + +D+R+++L +++ L + +AE L F+ KYLATF D + + AV+ VI + P DLL +PAV +L DP V++LL+IF +L E+++ N G L+ G+ E MRLLSL LA+ E +I Y ++ TLQV E+VE WVV+AITA+L++ KMDQ +VV+V+R + R F + W L+ KL WR N+++++ +++ K +S Q
Sbjct: 26 ADAGPEVAEPQVSRLCREAEESIRDCRWLDLATLMVTSADLVSTKISEKDLECTYTIICSLVKNVKTPEEVLEMVKAIASKVVQQPDDKASLRLKILFNLYNLLDHPNA-RFQVYMKSLELAVNGKITEYIVPSFKKIDSFLKEW-SIDIKDQREVFLAIAKVLRENKSLAEESLQFVTKYLATFSNDDAQVLSEAKEE-AVRAVIEFFKAPSIC---QCDLLDMPAVAQLEKDPNTAPVYQLLKIFLTQRLDAFMEFQNANSGFLQTYGLVEENCVSKMRLLSLVDLASDESGKISYASIKNTLQVNEEEVELWVVKAITAKLVDCKMDQMNQVVIVSRCAERDFGQKQWQSLRTKLAAWRDNITNVINTIQANKVTEEASSGTQ 405 The following BLAST results are available for this feature:
BLAST of EWM25402.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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