EWM25354.1, cds5242 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|585107115|gb|EWM25354.1| (lycopene beta cyclase [Nannochloropsis gaditana]) HSP 1 Score: 1739.55 bits (4504), Expect = 0.000e+0 Identity = 833/833 (100.00%), Postives = 833/833 (100.00%), Query Frame = 0
Query: 1 MDAQAEGRNSLAGPRASIDQYTYPSTSEWPLLWADHFIFYIYIYIHSNRKAILGFTGPALCFFSRAVKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGQKLDDISSDLLHECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERYPDLQAEQEARAVEYRAAQKASKRDQEKQEREEKKRREEEAKLRSYESLMNDGGMESNKKWGSTADVSAALLLKTFGLTDNQDMPRVPMWLHIICSFMFCGASMGWVARGLVSKHDKPSCLVNRNPTARKPKQLPLFPAPVVSESSQTHFLRSNAQFSAKETIECSNSAMKPIVCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDGTRVRARFLLDCSGYQSRLVTLDGTHDPGVQIAYGIECEVDMCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKGGLPFIRSVTPLADLPSFFELEKTGMSDRSELMKFDSIS 833
MDAQAEGRNSLAGPRASIDQYTYPSTSEWPLLWADHFIFYIYIYIHSNRKAILGFTGPALCFFSRAVKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGQKLDDISSDLLHECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERYPDLQAEQEARAVEYRAAQKASKRDQEKQEREEKKRREEEAKLRSYESLMNDGGMESNKKWGSTADVSAALLLKTFGLTDNQDMPRVPMWLHIICSFMFCGASMGWVARGLVSKHDKPSCLVNRNPTARKPKQLPLFPAPVVSESSQTHFLRSNAQFSAKETIECSNSAMKPIVCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDGTRVRARFLLDCSGYQSRLVTLDGTHDPGVQIAYGIECEVDMCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKGGLPFIRSVTPLADLPSFFELEKTGMSDRSELMKFDSIS
Sbjct: 1 MDAQAEGRNSLAGPRASIDQYTYPSTSEWPLLWADHFIFYIYIYIHSNRKAILGFTGPALCFFSRAVKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGQKLDDISSDLLHECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERYPDLQAEQEARAVEYRAAQKASKRDQEKQEREEKKRREEEAKLRSYESLMNDGGMESNKKWGSTADVSAALLLKTFGLTDNQDMPRVPMWLHIICSFMFCGASMGWVARGLVSKHDKPSCLVNRNPTARKPKQLPLFPAPVVSESSQTHFLRSNAQFSAKETIECSNSAMKPIVCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDGTRVRARFLLDCSGYQSRLVTLDGTHDPGVQIAYGIECEVDMCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKGGLPFIRSVTPLADLPSFFELEKTGMSDRSELMKFDSIS 833
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|299473610|emb|CBN78004.1| (Lycopene beta cyclase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 483.411 bits (1243), Expect = 5.136e-159 Identity = 243/458 (53.06%), Postives = 309/458 (67.47%), Query Frame = 0
Query: 357 KPIVCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDGTRVRARFLLDCSGYQSRLVTLDGTHDPGVQIAYGIECEVD--MCPYGEDAMTLMDYRTDYLDNQAAEVQMTAARE--PTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKK-ASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKG-GLPFIRSVTPLAD 808
K +V D AIVG GPAG VMA LLA++H LKV ++DP L++RWIPNYGVWVEEWEAL+K L L CL +TW TD F GGSHG P DER RI R Y RV R ++ L++R G + +DA+++ H +G+ + LDDG ++ R L+DCSG+ S LV G H+PGVQIAYG E EV PY E+AM MDYRTDY D + + PTF+YAMPMG +G++ ++FFEETSLVARPP+SFD CK+R+ RLKH G V V +EE CYIPMGGA+P +QRVVAFGGA GLVHAATGY R +AA+G ++AIA ELKK +AAAR Y ++W +LQRDF +FGGEFLMAQ A LRGFF+ FF+LP +W GFL+G+P LP+NE H+ W R +FG+ + +++ LA AG G I++VTPLA+
Sbjct: 32 KRVVYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWEALDKDLQIGLGDCLDRTWEVTDSFFGGSHGTPADERCRIDRPYARVSRDKMQANLKSRLSAAGVTKIKGKVDAKTLEHSADGTSVCLDDGQQIDCRLLVDCSGHYSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYADKAELSPEEVKGLDDTPTFLYAMPMGAAPNGQR-RIFFEETSLVARPPISFDLCKERLYRRLKHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAASGAVSRAIAAELKKDGPGTSEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQPASTLRGFFNGFFKLPLPLWAGFLSGYPNLPHNELHQDWQSRFKFGLQFFFKLAPAVQFQLALAGALSGWQYGLIKAVTPLAE 488
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|873232035|emb|CEM06650.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 483.797 bits (1244), Expect = 2.327e-158 Identity = 236/460 (51.30%), Postives = 307/460 (66.74%), Query Frame = 0
Query: 362 DVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDG--TRVRARFLLDCSGYQSRLVTLDGTHDPGVQIAYGIECEVDMCPYGEDAMTLMDYRTDYL-DNQAAEVQMT-----AAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKK---ASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKGGLPFIRSVTPLADLP 810
DV IVG GPAG+ M A+LA+++ L+VVM+DP++ +RW NYGVWV EWEA+E+ L + CL W TDLF P LRI R Y RV+R L+ LR A G ++L A+D SV HD+ GS +RL DG T +R + ++DC+G++S+L+ DG HDPG QIAYGI CE + P+ E AM MDYRTDY+ + Q E M A REPTF+Y MP G + G + ++F EETSLVARPPMSFDECK+R + RL +LG +EEEEFCYIPMGGAIP R+QRV+AFGGA G+VHAATGY ICR M+ PTA+AIA E+++ + PD AAR Y ++W R QR+F +FGGEFLM Q+ NLR FF FF L MW GFLAGWPGLP+N+QHETW +R+ F +S + +++ AL + V GG+ +R++TP +P
Sbjct: 89 DVLIVGAGPAGTAMGAVLAKRYGLRVVMIDPRIHERWPNNYGVWVAEWEAVERQLQLGVDECLDHRWEKTDLFLDPGGTTP----LRIHRPYARVNRIKLQQRLRAHAQQAGVVMLDTAIDPSSVRHDDTGSSVRLQDGRSTELRTKLIVDCTGHESKLIERDGRHDPGFQIAYGIMCECERHPFDEGAMLFMDYRTDYITEAQKGEPTMQTDLDKAVREPTFLYVMPFGESASGLR-RIFLEETSLVARPPMSFDECKERFKKRLAYLGVEPQKIEEEEFCYIPMGGAIPKRNQRVIAFGGAAGVVHAATGYMICRMMSGVAPTAEAIAKEIRQPIDGVFAPDRAARTAYAALWPAQFRRQREFTVFGGEFLMQQNVHNLRAFFRGFFNLELPMWAGFLAGWPGLPHNDQHETWTRRIAFSLSFFTKLNNAVRAALVKSAVFGGGVDLLRALTPDGVVP 543
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|223996393|ref|XP_002287870.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976986|gb|EED95313.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 417.157 bits (1071), Expect = 1.649e-132 Identity = 223/492 (45.33%), Postives = 307/492 (62.40%), Query Frame = 0
Query: 352 SNSAMKPI---VCDVAIVGGGPAGSVMAALLAQQHELK---VVMMDPKLDQRWIPNYGVWVEEWEALEKLL-GFSL---RSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGS--LLRLDDG--TRVRARFLLDCSGYQSRLVTLDG---THDPGVQIAYGIECEVD--------MC-PYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKG---GLPFIRSVTPLADLPSFFE 814
SN + P CDV ++G GPA +A LL+ + K V++ D D+RW PNYGVW +EW+++ KL F+ + + W +TD F GGS I ++R+R+ R Y R++R L+ L + + + + S+VHDE G+ L++ DG ++VRA+ ++DC+G++S++V D + PG QIAYGI EVD C PY ++AMTL DYRTD+ + E+ A + PTFMYAMP+ R +FFEETSLVARP +SF ECK R RL+HLG TV VEEEEFCYIPMGG +P + QRV+ FGGA +VH +TGY +CR+M AG AK I +EL++ ++NPD AA Y+++W+ TT QR+F +FGGEFLM Q+ LRGFFD FF+LP +W GFLAGWPGLPNNE HETW RL FG++ P+S+ + + + T G+P +SVTPL LP +E
Sbjct: 76 SNPTLTPTSQDTCDVLVLGSGPAARSIATLLSSKANDKAYDVLLADSNYDRRWAPNYGVWQDEWQSICKLYESFNQPIGNEVIDRLWMSTDCFFGGSFDIAAEQRMRLDRPYCRIERDVLRRVLSPASECTSVNIYSPS---GSMVHDESGTSVLIQSKDGDISQVRAKLVVDCTGHESKIVLKDDRMKSIPPGFQIAYGILAEVDETSIPNNDFCGPYFKEAMTLFDYRTDHFPEGSNELA-KAEKAPTFMYAMPLNGNR------IFFEETSLVARPALSFQECKDRCMTRLEHLGITVTKVEEEEFCYIPMGGPLPAKDQRVIGFGGAAAMVHPSTGYHLCRAMMGAGEVAKVIREELEEKNWNPDRAAARAYNAIWSPTTIAQRNFAVFGGEFLMKQNVVGLRGFFDGFFKLPLGLWGGFLAGWPGLPNNENHETWWARLVFGLTFVSKLPVSVAVDMLGSIATYSISEGVPLPQSVTPLLGLPDGYE 557
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|397601116|gb|EJK57822.1| (hypothetical protein THAOC_22103 [Thalassiosira oceanica]) HSP 1 Score: 404.445 bits (1038), Expect = 1.984e-127 Identity = 223/502 (44.42%), Postives = 305/502 (60.76%), Query Frame = 0
Query: 361 CDVAIVGGGPAGSVMAALLAQQHE-----LKVVMMDPKLDQRWIPNYGVWVEEWEALEKL---LGFSL-RSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNEL----------------RTRALDGGAILLAKALD----AESVVHDEEGS--LLRLDDG--TRVRARFLLDCSGYQSRLVTLDG---THDPGVQIAYGIECEVDMC---------PYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAP--LSLKLALAAAGVT-KGGLPFIRSVTPLADLPSFFE 814
CDV ++G GPA ++ LLA V++ D D+RW+PNYGVW +EWE++ ++ G L +C+ + W TD F GGS IPVD R+R+ R Y RVDR +L+ L R R + I A A++ A S+ HDE GS +L+ DG +VRA+ ++DC+G++S++V D ++ PG QIAYG+ ++D PY ++AMTL DYRTD+ + + E+ A PTF Y MP+ R VFFEETSLVARP +SF+ECK+R RL+HLG TV +EEEEFCYIPMGG +P + QRVV +GG+ +VH +TGY +CR+M AG A+ I DEL +NPD AA YD++W+ + QR+F +FGGEFLM Q + LRGFFD FF+LP MW GFLAGWPGLPNN++HETW RL FG++ P ++L + L+ G + G+ +SVTPL LP +E
Sbjct: 81 CDVLVLGSGPAARAISTLLASSTSNGSGGFDVLVADANFDRRWVPNYGVWQDEWESVREVYASFGQPLGDACIDRLWSVTDCFFGGSFDIPVDYRMRLDRPYCRVDRDSLRRTLSPESEVDVLNEGEGAARYRVVRANHISKATAVNVYSPAGSLSHDESGSTVMLQAKDGETIQVRAKVVVDCTGHESKIVLKDDRVKSNPPGFQIAYGVLAKLDESSIPDTNFAGPYSKEAMTLFDYRTDHFPDGSNEL-YKAETAPTFNYVMPLDSNR------VFFEETSLVARPAVSFEECKERCMTRLEHLGITVSEIEEEEFCYIPMGGPLPAKDQRVVGYGGSSAMVHPSTGYHLCRAMMGAGSVARVIRDELSSPDFNPDRAAARAYDAIWSPSNIGQRNFAVFGGEFLMKQKVEGLRGFFDGFFKLPLEMWAGFLAGWPGLPNNDKHETWSARLLFGLTFVSKLPPAVALDMFLSIIGYSISEGVALPQSVTPLLGLPDGYE 575
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|1072228454|gb|OEU13190.1| (lycopene beta cyclase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 399.053 bits (1024), Expect = 2.195e-125 Identity = 215/489 (43.97%), Postives = 294/489 (60.12%), Query Frame = 0
Query: 361 CDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWE-ALEKLLGFSLR-------SCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRT--RALDGGAILLAKALD----AESVVHDEEGSLLRLD----DGTRV--RARFLLDCSGYQSRLVTLDGTH---DPGVQIAYGIECEVD---------MCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLK----LALAAAGVTKGGLPFIRSVTP-LADLPSF 812
CDV I+GGGPAG +A+LL +L VV+ + D+ W+PNYGVW +EW+ L+K F + + + W TD + GGS IP ++R+R+ R Y R+DR ALK L R ++ + A ++ A +++HDE+G+ ++L D + V R + ++D +G++++LV D PG QIAYG VD + PY +DAMTL DYRTD+ D +E + A + PTFMYAMP+G R VFFEETSLVARP +SF ECK R RLKH G V +EEEEFCYIPMGGA+P R QR++ GGA +VH +TGY ICR + A AK I +EL N D A + YD++W+ QR+F FGGEFLM Q+ LRGFFD FF+LP +W GFLAGWPGL NE HE+W+KR+ FG++ + PL + L++ + +T+ I+SVTP L D PS+
Sbjct: 75 CDVLILGGGPAGCAIASLLGSNGKLDVVVANKDFDKDWVPNYGVWKDEWQTVLDKYKSFGIELDGGEFGRSVDREWDVTDCYFGGSFDIPTEKRMRLDRPYCRIDRFALKKSLTKNFRVVEANHMSNAIGINMYRPAGTLIHDEDGTTIQLQPKDADSSPVTMRTKIVIDTTGHETKLVMKDNIEPYTQPGFQIAYGASVVVDETESTNLSKIGPYEKDAMTLFDYRTDHFDGNESET-IKANKAPTFMYAMPLGGNR------VFFEETSLVARPAVSFQECKDRCFKRLKHHGIVVTKIEEEEFCYIPMGGALPARDQRILGLGGAATMVHPSTGYHICRCLMGASSVAKVIQEELALEQPNIDRAVASSYDALWSPGNIRQRNFATFGGEFLMKQNVVGLRGFFDGFFKLPLELWGGFLAGWPGLAYNENHESWEKRIWFGLNFIVKLPLPVAADMFLSIVSYSLTE-NFSLIQSVTPLLGDPPSY 555
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|219109716|ref|XP_002176612.1| (precursor of cyclase lycopene beta cyclase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411147|gb|EEC51075.1| precursor of cyclase lycopene beta cyclase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 399.823 bits (1026), Expect = 5.149e-125 Identity = 220/536 (41.04%), Postives = 321/536 (59.89%), Query Frame = 0
Query: 321 PLFPAPVVSESSQTHFLRSNAQFSAKETIECSNSAMKPIVCDVAIVGGGPAGSVMAALLA--QQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEK--------LLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALD-GGAILLAKALD------AESVVHDEEGSLLRL----DDGTRVRARFLLDCSGYQSRLV---TLDGTHDPGVQIAYGIECEVD---------MCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADEL--KKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLK---LALAAAGVTKGGLPFIRSVTPLADLPSFFELEKT 818
P+ P +VS S T F S++ ++ ++ + VCDV ++G GPA +A+LL+ QQ +KV++ D +D+ W NYGVW +EW+++ +G ++ + + + W TD + GGS IP++E++R+ R Y RVD+ AL++ L A ++KA+ A S++HDE+G+ ++L D VR++ ++DC+G++++LV T + PG QIAYG +VD PY ++AMTL DYRTD+ + E ++ A R PTFMYAMP+ K +VFFEETSLVARP MSF ECK R RL++LG V V EEEFCYIPMGGA+P + QRV+A GG+ +VH +TGY ICR + A A AI E+ A+ N D A + YD++W+ +QR+F +FGGEFLM Q+ LRGFFD FFRLP+ +W GFLAGWPGLPNN++HE+W RL +G++ + P + LA A + G+P +SVTP P +E ++
Sbjct: 54 PISPRTIVSSSPLTLFATSSSGIASASV----DTTIVDEVCDVLVLGSGPAARAIASLLSAPQQGAMKVILADQNVDKVWPANYGVWQDEWQSVVDRFQAAGVPFVGGNVDNAIDRAWNVTDCYFGGSFDIPMEEQMRVNRPYYRVDKYALRDSLTGNEYKIVKANHISKAIGPNLYSPAGSLMHDEDGTTIQLRTKDDQFLTVRSKLVVDCTGHETKLVLRETRPESQPPGFQIAYGCLVDVDESNSPDLSRFGPYDKEAMTLFDYRTDHFLTE--EEKIKADRAPTFMYAMPI------KDNQVFFEETSLVARPAMSFQECKDRCFRRLEYLGIRVTKVHEEEFCYIPMGGALPAKDQRVLAIGGSAAMVHPSTGYHICRCLMGATDMAAAIQKEMSYSPAAPNLDRVAASAYDALWSPENIMQRNFAVFGGEFLMKQNVVGLRGFFDGFFRLPTELWGGFLAGWPGLPNNDKHESWIARLWYGMNFIVRIPPLVAVDMLASIATYMVTEGVPLPQSVTPFFGKPESYEYKRN 577
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|1072234482|gb|OEU19212.1| (lycopene beta cyclase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 391.349 bits (1004), Expect = 2.334e-122 Identity = 212/487 (43.53%), Postives = 291/487 (59.75%), Query Frame = 0
Query: 363 VAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALE--------KLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRT--RALDGGAILLAKALD----AESVVHDEEGSLLRLD----DGTRV--RARFLLDCSGYQSRLVTLDGTH---DPGVQIAYGIECEVD---------MCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLK----LALAAAGVTKGGLPFIRSVTP-LADLPSF 812
V I+GGGPAG +A+LL +L VV+ + D+ W+PNYGVW +EW+ + +L G + + W TD + GGS IP ++R+R+ R Y RVDR ALK L R ++ + A ++ A +++HDE+G+ ++L D + + R + ++D +G++++LV D PG QIAYG VD + PY +DAMTL DYRTD+ D +E + A + PTFMYAMP+G R VFFEETSLVARP +SF ECK R RLKH G V +EEEEFCYIPMGGA+P R QR++ GGA +VH +TGY ICR + A AK I +EL N D A + YD++W+ QR+F FGGEFLM Q+ LRGFFD FF+LP +W GFLAGWPGL NE HE+W+KR+ FG++ + PL + L++ + +T+ I+SVTP L D PS+
Sbjct: 79 VLILGGGPAGCAIASLLGSNGKLDVVVANKDFDKDWVPNYGVWKDEWQTVLDEYKSFGIELDGGEFGRSVDREWDVTDCYFGGSFDIPTEKRMRLDRPYCRVDRFALKKSLTKNFRVVEANHMSNAIGINVYSPAGTLIHDEDGTTIQLQPKDADSSPITMRTKIVIDTTGHETKLVMKDNIEPYTQPGFQIAYGASVVVDETESTNLSKIGPYEKDAMTLFDYRTDHFDGNESET-IKANKAPTFMYAMPLGGNR------VFFEETSLVARPAVSFQECKDRCFKRLKHHGIVVTKIEEEEFCYIPMGGALPARDQRILGLGGAATMVHPSTGYHICRCLMGASSVAKVIQEELALEQPNIDRAVASSYDALWSPGNIRQRNFATFGGEFLMKQNVVGLRGFFDGFFKLPLELWGGFLAGWPGLAYNENHESWEKRIWFGLNFIVKLPLPVAADMFLSIVSYSLTE-NFSLIQSVTPLLGDPPSY 557
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|1210519428|dbj|GAX21707.1| (lycopene beta-cyclase [Fistulifera solaris]) HSP 1 Score: 374.785 bits (961), Expect = 4.598e-115 Identity = 206/501 (41.12%), Postives = 295/501 (58.88%), Query Frame = 0
Query: 360 VCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALE--------KLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGA---ILLAKALD----------AESVVHDEEGSLLRLD----DGTRVRARFLLDCSGYQSRLVTLD----GTHDPGVQIAYGIECEVD---------MCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADEL-KKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKG---GLPFIRSVTPLADLPSFFELEKT 818
CD+ ++G GPA +A+LLA +L V++ D +D+ ++PNYGVW +EW+A+ L G + S + + W TD + GGS IPV ERLRI R Y R+DR AL+ L + +G A ++ AK + A +++HD +G+ ++L+ + VR + ++DC+G++++LV + PG QIAYG +VD + PY ++AMTL DYRTD+ + E ++ AA PTFMYAMP+ +FFEETSLVARP +SF ECK R RLK+ V V EEEFCYIPMGGA+P + QR++ GG+ +VH +TGY +CR + AA A+ I +EL + A N D AA A Y ++W+ QR+F +FGGEFLM Q LRGFFD FFRLP +W GFLAGWPGLPNN++HE+W RL +G++ + P + + + +T L ++SVTP P +E +K
Sbjct: 41 TCDILVLGSGPAARAIASLLAVSDDLDVLLTDTNIDKEFVPNYGVWQDEWQAVVDRYAAAGVSLDGKEVPSSVNRLWKTTDCYFGGSFDIPVTERLRIDRPYCRIDRMALREALSPDSGNGNAPYRMMAAKHISEAFQINLYQPAGTLIHDADGTTIQLETLEQERLTVRTKLVIDCTGHETKLVLREPRGGNQAPPGFQIAYGALVQVDETESPDLTQIGPYDKEAMTLFDYRTDHYVDPEDEAKVGAA--PTFMYAMPL------YDNLIFFEETSLVARPAVSFQECKDRCIERLKYHRIKVTEVYEEEFCYIPMGGALPAKDQRIIGLGGSAVMVHPSTGYHLCRVLMAAADVAEVIRNELVETAQPNLDRAAAAAYHAMWSPENMRQRNFAVFGGEFLMKQDVVGLRGFFDGFFRLPLPLWAGFLAGWPGLPNNDKHESWWARLWYGLNFIVRIPGPVAADMVYSILTYSIFRNLSLMQSVTPFLGAPESYEYKKN 533
BLAST of EWM25354.1 vs. NCBI_GenBank
Match: gi|1210531197|dbj|GAX10298.1| (lycopene beta-cyclase [Fistulifera solaris]) HSP 1 Score: 374.015 bits (959), Expect = 1.277e-114 Identity = 210/502 (41.83%), Postives = 295/502 (58.76%), Query Frame = 0
Query: 360 VCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALE--------KLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRT-RALDGGAIL-------LAKALD------AESVVHDEEGSLLRLD----DGTRVRARFLLDCSGYQSRLVTLD---GTH-DPGVQIAYGIECEVD---------MCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADEL-KKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKG---GLPFIRSVTPLADLPSFFELEKT 818
CD+ ++G GPA +A+LLA +L V++ D +D+ ++PNYGVW +EW+A+ L G + S + + W TD + GGS IPV ERLRI R Y R+DR AL+ L A +G A +++A A ++VHD G+ ++L+ + VR + ++DC+G++++LV + G H PG QIAYG +VD + PY ++AMTL DYRTD+ + E ++ AA PTFMYAMP+ +FFEETSLVARP +SF ECK R RLK+ V V EEEFCYIPMGGA+P + QR++ GG+ +VH +TGY +CR M AA A+ I +EL + A N D AA A Y ++W+ QR+F +FGGEFLM Q LRGFFD FFRLP +W GFLAGWPGLPNN++HE+W RL +G++ + P + + + +T L ++SVTP P +E +K
Sbjct: 50 TCDILVLGSGPAARAIASLLAVSDDLDVLLTDTNIDKEFVPNYGVWQDEWQAVVDRYAAAGVSLDGNDVPSSINRLWKTTDCYFGGSFEIPVAERLRINRPYCRIDRLALREALTPGLATNGNAPYRWMAARHISEAFQINLYQPAGTLVHDANGTTIQLETLEQERLTVRTKLIIDCTGHETKLVLREPRGGNHAPPGFQIAYGALVQVDETESTDLTQIGPYDKEAMTLFDYRTDHYVDPEDEAKVGAA--PTFMYAMPL------YDNLIFFEETSLVARPAVSFQECKDRCIERLKYHRIKVTEVYEEEFCYIPMGGALPAKDQRIIGLGGSAVMVHPSTGYHLCRVMMAAADVAEVIRNELVETAQPNLDRAAAAAYHAIWSPENIRQRNFAVFGGEFLMKQDVVGLRGFFDGFFRLPLPLWAGFLAGWPGLPNNDKHESWWARLWYGLNFIVRIPGPVAADMVYSILTYSLFRNLSLMQSVTPFLGAPESYEYKKN 543 The following BLAST results are available for this feature:
BLAST of EWM25354.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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