EWM25431.1, cds5209 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|585107192|gb|EWM25431.1| (protein of unknown function DUF4149 [Nannochloropsis gaditana]) HSP 1 Score: 533.872 bits (1374), Expect = 0.000e+0 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0 Query: 1 MKKPCSVLLLVSTAALLLPLHEAFKIPIGARLARTSSSSTLKRWPVPPSSNLVQGAGVVSQVLRASDAKGAEGDSAGVQPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266 MKKPCSVLLLVSTAALLLPLHEAFKIPIGARLARTSSSSTLKRWPVPPSSNLVQGAGVVSQVLRASDAKGAEGDSAGVQPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML Sbjct: 1 MKKPCSVLLLVSTAALLLPLHEAFKIPIGARLARTSSSSTLKRWPVPPSSNLVQGAGVVSQVLRASDAKGAEGDSAGVQPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|219127675|ref|XP_002184056.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404287|gb|EEC44234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 176.022 bits (445), Expect = 8.372e-51 Identity = 90/188 (47.87%), Postives = 120/188 (63.83%), Query Frame = 0 Query: 78 VQPWIEPAFHNKLSVRILAVLAGISIA-MKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPA-KAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLS 263 + W + HN + R LA+L +++A K+S LP A IH+L F FG+V YTTFVLG+ M K+LPRQTFG+LQ+KLFP YFA S++AL LQL T K + + A K+M L +LA +N +LEP ST M +RY+LE + +E EYK L +FG HG SSL NLV + GG HA Y++ Sbjct: 56 TEEWTKKRLHNTAAFRSLAILGAVAVAGTKSSAQFLPAQATASIHVLSFATWFGTVAYTTFVLGITMFKNLPRQTFGKLQAKLFPTYFALSSVALVLQLATAKAMPVFASKSMTALGVALAMTALNQFYLEPVSTINMMERYSLESRGEKESNEYKRLKAQFGKFHGMSSLTNLVALCGGVAHAIYMA 243
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|873231225|emb|CEM08876.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 160.229 bits (404), Expect = 3.818e-44 Identity = 87/189 (46.03%), Postives = 120/189 (63.49%), Query Frame = 0 Query: 79 QPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRW-LAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266 Q W+ PA HN+ SVR+LA+L+ + S + + K ++HLL + GSV+YTTFV G+ M ++LPR+TFGRLQSKLFP+YF L + L TG LP +AM LA +L L N LEP ST++MF+RY +E Q R+++ EYK LAK FG HG SSL NL+ + GG H + L+ ++ Sbjct: 103 QVWVAPAVHNRNSVRLLALLS-TLLLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVMTLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASLI 290
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|299117062|emb|CBN73833.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.221 bits (391), Expect = 9.613e-43 Identity = 81/191 (42.41%), Postives = 122/191 (63.87%), Query Frame = 0 Query: 74 DSAGVQPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALA-LALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLS 263 D + Q +I+PA HNK VR+ A+L +A K + M +P + A +H++ A GS ++TTF G+ M+++LPRQTFG+LQSKLFP+YF ++ ++ LA+ ++ G L +A L SL + L+N + LEP ST +M +RY LE +++ EYKEL K FG HG SS NL ++G FV+A+ L+ Sbjct: 61 DPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGA-MLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRG--CPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELA 248
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|1210515006|dbj|GAX25969.1| (hypothetical protein FisN_4Hh547 [Fistulifera solaris]) HSP 1 Score: 151.369 bits (381), Expect = 1.942e-41 Identity = 97/238 (40.76%), Postives = 129/238 (54.20%), Query Frame = 0 Query: 37 SSSTLKRWPVPPSSNLVQGAGVVSQVLRASDAKGAEGDSAGVQPWIEPAFHNKLSVRILAVLAGI---SIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTL-GLPAKAMRWLAASLAAA----LINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266 S + L +P SS V G G++S + A + + W +P HN + R +A+L+ + + K+ LP +H + F FG+V YTTFV G+ M K+LPRQTFG+LQ+KLFP YFA S+ LALQL+T K+L + KA A +L A LIN FLEP ST M +RY LE + +E YK L FG HG SSL NL+ + G HA YLS L Sbjct: 6 SGNMLSPFPAHRSSTQV-GGGLLSPRMSAVSS----------EEWTKPRLHNTATFRTIALLSALLAAGFSSKSPLKLLPAQVLGSVHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTLALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFFLEPKSTSNMMERYELEDKGEQESDRYKTLKANFGKFHGMSSLTNLIGLCAGVAHAVYLSATL 232
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|1210516923|dbj|GAX24412.1| (hypothetical protein FisN_4Lh547 [Fistulifera solaris]) HSP 1 Score: 149.828 bits (377), Expect = 4.082e-41 Identity = 87/196 (44.39%), Postives = 114/196 (58.16%), Query Frame = 0 Query: 79 QPWIEPAFHNKLSVRILAVLAGI---SIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTL-GLPAKAMRWLAASLAAA----LINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266 + W +P HN + R +A+L+ + + K+ LP IH + F FG+V YTTFV G+ M K+LPRQTFG+LQ+KLFP YFA S+ LALQL+T K+L + KA A +L A LIN +LEP ST M +RY LE + +E YK L FG HG SSL NL+ + G VHA +LS L Sbjct: 18 EEWTKPRLHNTATFRTIALLSALLAAGFSSKSPLKLLPAQVLGSIHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTLALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFYLEPKSTSNMMERYELEDKGEQESDRYKTLKASFGKFHGMSSLTNLIGLCAGVVHAVFLSATL 213
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|223996263|ref|XP_002287805.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976921|gb|EED95248.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 145.591 bits (366), Expect = 2.821e-40 Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 0 Query: 120 IHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLG--LPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHA 259 +HLL F FG+V+YTTFV G+ M K+LPR+ FG LQSKLFP+YF + +Q+LT ++ L + L S AA L+N L+LEP ST+VMF RY LE +R+ EY +LAK FGA HG SSL NLV ++GG VH Sbjct: 2 LHLLSFSTWFGTVVYTTFVAGITMFKNLPRRVFGSLQSKLFPLYFQLCTSMIGIQILTLTSMPDILSKVSEVSLGISFAATLLNLLYLEPTSTQVMFDRYDLEDDGKRDSDEYGKLAKSFGAYHGMSSLANLVALIGGIVHG 143
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|552820016|ref|XP_005845520.1| (hypothetical protein CHLNCDRAFT_136618 [Chlorella variabilis] >gi|307105168|gb|EFN53418.1| hypothetical protein CHLNCDRAFT_136618 [Chlorella variabilis]) HSP 1 Score: 140.198 bits (352), Expect = 3.170e-37 Identity = 81/185 (43.78%), Postives = 116/185 (62.70%), Query Frame = 0 Query: 82 IEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQL--LTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEK-QNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLS 263 +EP+ NK VR+L + A ++ A + + LP + ++HLL +G GS+++T+FV G+ MI+HLPRQTFGRLQ++LFP YFA SA A+QL L PAK + + LA +L++ L +EP +TKVMFQRY LE R+E L K FG HG SSL+NL T++ H ++L+ Sbjct: 36 LEPSTSNKRWVRLLVLSATVAAAARGTAY-LPTAGVAFVHLLAYGIWLGSLVWTSFVAGITMIRHLPRQTFGRLQARLFPKYFALSAACTAIQLGVLLFAAAAPPAKQLVLVGLGLATSLLSLLVVEPITTKVMFQRYELESAAGPRDEAAITALKKSFGNWHGISSLINLGTLITAIGHGWWLA 219
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|545355028|ref|XP_005643334.1| (hypothetical protein COCSUDRAFT_60092 [Coccomyxa subellipsoidea C-169] >gi|384245295|gb|EIE18790.1| hypothetical protein COCSUDRAFT_60092 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 132.88 bits (333), Expect = 3.768e-34 Identity = 76/189 (40.21%), Postives = 116/189 (61.38%), Query Frame = 0 Query: 80 PWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAAALI----NSLFLEPASTKVMFQRYALEKQ-NRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLS 263 P +EP+ NK VR+ V A + +A +++ LP + A +IHL+ +G GS ++TTF+ G+ M K+LPRQTFG+LQ+KLFP YFA + A LQ+ T G+P R + +L A + N L++EP +T +MF+RY LE ++ + K+L K+FG HG SSL+NLV + H ++L+ Sbjct: 45 PMLEPSAFNKNWVRLAWVSAALVVAARSTEF-LPVNVAVFIHLMAWGLWLGSNIWTTFIAGITMFKNLPRQTFGKLQAKLFPQYFAVAIAAGVLQIGT-LAFGVPGGIARTQSITLGVAFVTSLANWLYVEPVATNLMFERYNLENAPGEKDSAKIKQLYKQFGKFHGISSLLNLVALGAVISHGWWLA 231
BLAST of EWM25431.1 vs. NCBI_GenBank
Match: gi|1004140274|gb|KXZ48274.1| (hypothetical protein GPECTOR_29g51 [Gonium pectorale]) HSP 1 Score: 117.857 bits (294), Expect = 6.234e-28 Identity = 74/193 (38.34%), Postives = 110/193 (56.99%), Query Frame = 0 Query: 82 IEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSA----LALA-LQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELA---KRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266 ++P+ N VR L+VL G A+ + LP + ++H+ + G+ ++ TF +G+ M K+LPRQTFG+LQ+K+FP YFA +A LAL L L +A+ LA SLA L N L+LEP T +MFQRY +E + + + +A K+FG HG SSLVNLV+ H ++L+ +L Sbjct: 95 LKPSVVNTPVVRALSVL-GAVAAVSATSAVLPSAFGAFLHVTAYAVLLGAQLWNTFFVGITMFKNLPRQTFGKLQAKMFPQYFALTAGANLLALGTLYLAGAAATAPGTRALVALAVSLAGLLANWLYLEPICTGLMFQRYDIENLPEKTDADKDRIAALYKQFGKWHGISSLVNLVSFCVVVAHGWFLATLL 286 The following BLAST results are available for this feature:
BLAST of EWM25431.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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