EWM25479.1, cds5202 (CDS) Nannochloropsis gaditana

Overview
NameEWM25479.1
Unique Namecds5202
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:441068..441120 +
Alignment locationCM002465.1:441242..441350 +
Alignment locationCM002465.1:441473..441538 +
Alignment locationCM002465.1:441615..444243 +
Alignment locationCM002465.1:444288..444307 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25479.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100207g1.9445.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:441068..441120 +
CM002465.1supercontigCM002465.1:441242..441350 +
CM002465.1supercontigCM002465.1:441473..441538 +
CM002465.1supercontigCM002465.1:441615..444243 +
CM002465.1supercontigCM002465.1:444288..444307 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585107242|gb|EWM25479.1| (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana])

HSP 1 Score: 1873.21 bits (4851), Expect = 0.000e+0
Identity = 958/958 (100.00%), Postives = 958/958 (100.00%), Query Frame = 0
Query:    1 MAVEGTRPIEPWWQRRGWKKSLLVLFAALATIGLIAGIVIAFQPEEKHASQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEVSTESLPDGPGGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFDFGFGAFLGDDDEENDGFVKKMMNRMKKKLGRDDDEEEWGWDDDWEWYDDDWETNYGGGGYSPGKAGDDDWEEWWGDDDREALEGGGGWGADDDDKEANSDIGFDDDDEETDWASGATDDDLWDDDLGAGGNDDSEVAPTDDDVLDQGAGLGGWDDDEETGDLRDDDVETPLVNGPKQDLGVVGETDDDLEEFGVEHDDDLFDNQDLGLDDEETQEEDDLYEQDARDDDLETFGVERDDDLFDNQDLGFDGAFDDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHARCGGR 958
            MAVEGTRPIEPWWQRRGWKKSLLVLFAALATIGLIAGIVIAFQPEEKHASQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEVSTESLPDGPGGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFDFGFGAFLGDDDEENDGFVKKMMNRMKKKLGRDDDEEEWGWDDDWEWYDDDWETNYGGGGYSPGKAGDDDWEEWWGDDDREALEGGGGWGADDDDKEANSDIGFDDDDEETDWASGATDDDLWDDDLGAGGNDDSEVAPTDDDVLDQGAGLGGWDDDEETGDLRDDDVETPLVNGPKQDLGVVGETDDDLEEFGVEHDDDLFDNQDLGLDDEETQEEDDLYEQDARDDDLETFGVERDDDLFDNQDLGFDGAFDDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHARCGGR
Sbjct:    1 MAVEGTRPIEPWWQRRGWKKSLLVLFAALATIGLIAGIVIAFQPEEKHASQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEVSTESLPDGPGGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFDFGFGAFLGDDDEENDGFVKKMMNRMKKKLGRDDDEEEWGWDDDWEWYDDDWETNYGGGGYSPGKAGDDDWEEWWGDDDREALEGGGGWGADDDDKEANSDIGFDDDDEETDWASGATDDDLWDDDLGAGGNDDSEVAPTDDDVLDQGAGLGGWDDDEETGDLRDDDVETPLVNGPKQDLGVVGETDDDLEEFGVEHDDDLFDNQDLGLDDEETQEEDDLYEQDARDDDLETFGVERDDDLFDNQDLGFDGAFDDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHGAADDDVEDDDVEVEHARCGGR 958          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585108908|gb|EWM26817.1| (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 218.394 bits (555), Expect = 9.324e-55
Identity = 158/472 (33.47%), Postives = 247/472 (52.33%), Query Frame = 0
Query:  147 ISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPV---------LRGGTALVELGGRFSAFG-VIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGA-GAIVVR----GSPSAVNTGVAYIAPPVSQYFVNG 603
            I+   C P +G++LR + E  S C +I+L PG  Y +     D++I +    VIIG P++LP ID     R F + A G LDL+FV+ +RG       +P+         LRGG A +  GG     G ++  +   VG   +L+A D+    R++GG + +  G + +   H  + +PGVL RE+Y VG  +LVV+G   ++G T T + LF+   GVG  +++LGG  V +G +F +N     + G G+LVF+GGG  I +GC    N+   S FG G  L+ GGGV V++G  F+++L ++   G G+  +LGGG +  TGV Q  +   +  A  GV  +VGAG+ V      +R   +A  +G GG++ +GAGV  +    +     +  V   GG++ + AG L  + +   K V +      G D  V A GA++VR    G+P+ V T      P +  ++V G
Sbjct:  183 IAVHGCTPDTGVQLRSLVETGS-CPVITLTPGVRYVL-----DEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRG-------VPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVG--DVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATN-----PNLFNFYVAG 634          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585109935|gb|EWM27664.1| (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana])

HSP 1 Score: 192.2 bits (487), Expect = 2.462e-46
Identity = 138/495 (27.88%), Postives = 230/495 (46.46%), Query Frame = 0
Query:  146 LISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIAT-IPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFD 639
            L +G  C+      L + A + + C ++ L+ G +YN+     D  + +     +IGNP   P I+ A+++R F + +G   D++ +  Y G G+LI   I    GG   + +G R  AF  +FT   PV    I  AP+      +FGG + + GG++T+    F+ + PG +      +G  +L+++G A L+ V F  +Q+F    G G  + VLGG L  + CT T N +       G  +FLGGGVG+F+  A    +A  S +G G  + +G G+ + +G A + +   A   G GV   +G G     G     + G+  +   GV  + GAG   +VG        +A    +GG + +G G  V VG A   + G+     +GG+ +LGAG ++ +      N G+      G + FV AG+  V+    + N G+ Y+      + V G       +  ++  + +  +   R+K     FK FD
Sbjct:  172 LRNGKTCLAHDTRRLME-AVNSTACDVVVLVAGHVYNL-----DRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFT-IQPVRESFINSAPEF-----IFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGG-------RKCEVTTEESTGSFNYREKGYGLCFKGFD 647          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585102763|gb|EWM22289.1| (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 184.111 bits (466), Expect = 6.865e-44
Identity = 143/469 (30.49%), Postives = 226/469 (48.19%), Query Frame = 0
Query:  152 CVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPV----LRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLV 616
            C P++  ELR M  D + C  ++L+P   Y++      + + I  R  ++G P+ LP ID  ++ R F + AGG LD++FV   +G  + +  +P+    LRG T  +  GG     G  F+         + I P  +  V+VFGG +    G + +T  H +  + G+ FREI  VG + LV+ G   L+G  F N  +F +  G G  VA LGG +V +GC F      +   G G L FLGGG  I +GC     +   ++FG G+ +F G GV V++G  ++A+  + I  G G  +++G G    TGV Q   + + +  G G+ N++GAG AV      +R+  +   +G G  + +GAG   +V A    N G+ +   +GG+  +  G +  I         + FA   G D F+G G     G+   +N    YI P          A P +F++  LV
Sbjct:    9 CTPKNAEELRYMI-DHTTCPRLTLVPATNYSIT-----EQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKG--KFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPPQTN-VQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIFASSLGAGGYVANLGGTVVITGCLFNYAGTFVCTMGLGYLFFLGGGATILTGCIVTTTIGFAAYFGGGIGIFTGSGVAVMTGFIYAANGIMGIGTGLGFQIAVGAGVSIRTGVIQTTMSALGYVTGCGITNYIGAGIAVFSDVILARSTALLTFFGTGSYLYLGAGSATIVNAVGFFNTGIGANGFVGGDMAVFGGYMSRINQVYISTSAISFAAGQGADLFIGLG-----GASLVLN---LYITP----------ATPVAFRSRGLV 450          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585104563|gb|EWM23493.1| (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana])

HSP 1 Score: 182.57 bits (462), Expect = 2.201e-43
Identity = 140/453 (30.91%), Postives = 221/453 (48.79%), Query Frame = 0
Query:  152 CVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGG--------ELIATIPV------LRGGTALVE---LGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAV-----RVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSP 582
            C    G+EL    E+ S C+I+ L PG++Y +     + +I +    +++GNP  LP IDG D+ R FH++ GG LDL+FV+ +   G        E+ AT         +RGG+  ++   LGG+F+  GVIF + P V   A      + R++     R++GG VF+ GG V      FW L     F  +  +G D+L + GV   +G TF  + +F    GVG  VA   G+   +  TF  N  AI+ +  G    +GGGV I +        A  S+ G+G EL V GGV+V++G     +  +    G G   ++G G    TG       G+ F++  G +N++G+G  +  G      +  A   G GG   +GAG     G   ++   +A++ ++G    + AG L  I SP  +   + +AF LG   ++GAGA+V+  +P
Sbjct:  155 CEVNDGLELTDAIENQS-CSIVYLKPGQLYEL-----EREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFT--GVIFIDDPDVEDAA---RRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQLGGVLTFTGCTFFENTVFGIENGVGLFVAQFAGLSTYTFNTFIENNFAISENCLGQAFLVGGGVMIMTHSVINEYSAGLSYSGSG-ELNVLGGVLVVTGMNNVEAFALGAVYGVGFEYTVGSGVAIFTGTVFDEYNGLLFFSALGEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGAMVLWATP 595          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585108528|gb|EWM26475.1| (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana])

HSP 1 Score: 169.474 bits (428), Expect = 3.658e-39
Identity = 146/483 (30.23%), Postives = 231/483 (47.83%), Query Frame = 0
Query:  144 TSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGG------------ELIATIPVLRGGTALVELGGRFSAF-GVIFTNAPPVGMPAILIAPDVSRAV----------RVFGGQVFVTGGIVTITLSHFW---VLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWV-----ANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPP 595
            +  +    C P++ +EL Q+A + + C ++ L         L D ++ I +     ++G+P  LPTID     R F I+ GG L+LQ+VR  +G G            ++ + +  ++GG+ ++E G   + F GVIF         A++   +++             R++GG V+VT G V     HFW   +L P   F +   +GAD+LV+AG   ++G TFTN+ LF N  G G+ +  LGG  V + CT     + ++   AG++VF GGG  I +G  +       N A F  FGT      G GV+V +G        V    G  +  ++G G L  +G T     G  + A  G+++++G G++  VG   S +     ++G GG    GAG  V VG      + V S +  GG    GAGI+I +G+P+   + V +   LG   FVGAG+ V+  SP ++   V   A P
Sbjct:  196 SKFVGKDTCWPRNIVEL-QIAVEEADCPLVVLTNPNPMAYMLMDMNE-IMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFL--------AVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMP---FTDQVAIGADILVLAGNVFVTGCTFTNTMLFSNYGGAGWNIVTLGGNTVMTWCTIQWQAIIMSMFVAGMVVFTGGGTLIMTGVDFRFVSAGMNFAGFGSFGT------GAGVMVNTGVTMEQVFAVMSSFGASMYNAVGAGVLIESGATFVQFTGPVYMAMTGMMDFLGTGASSHVGVPCSMSGSTGAMHGQGGFSYNGAGSSVWVGCPVAMFWAVYSFLGTGGVAAQGAGIMIWVGNPVFMPMAVSYFAGLGAIMFVGAGSAVIALSPVSMPMAVMAFAGP 659          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|553185366|ref|XP_005854242.1| (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >gi|422294822|gb|EKU22122.1| hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 167.162 bits (422), Expect = 1.394e-38
Identity = 129/420 (30.71%), Postives = 204/420 (48.57%), Query Frame = 0
Query:  185 LPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGG--------ELIATIPV------LRGGTALVE---LGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAV-----RVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSP 582
            L + + +I +    +++GNP  LP IDG D+ R FH++ GG LDL+FV+ +   G        E+ AT         +RGG+  ++   LGG+F+  GVIF + P V   A      + R++     R++GG VF+ GG V      FW L     F  +  +G D+L + GV   +G TF  + +F    GVG  VA   G+   +  TF  N  AI+ +  G    +GGGV I +        A  S+ G+G EL V GGV+V++G     +  +    G G   ++G G    TG       G+ F++  G +N++G+G  +  G      +  A   G GG   +GAG     G   ++   +A++ ++G    + AG L  I SP  +   + +AF LG   ++GAGA+V+  +P
Sbjct:   67 LYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFT--GVIFIDDPDVEDAA---RRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQLGGVLTFTGCTFFENTVFGIENGVGLFVAQFAGLSTYTFNTFIENNFAISENCLGQAFLVGGGVMIMTHSVINEYSAGLSYSGSG-ELNVLGGVLVVTGMNNVEAFALGAVYGVGFEYTVGSGVAIFTGTVFDEYNGLLFFSALGEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGAMVLWATP 480          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|553183773|ref|XP_005853964.1| (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >gi|422295099|gb|EKU22398.1| hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 164.081 bits (414), Expect = 1.232e-37
Identity = 156/490 (31.84%), Postives = 229/490 (46.73%), Query Frame = 0
Query:  141 LKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGEL-----------IATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPD---VSRAV---------RVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGC--AWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPP-VSQYFVNGQ 604
            LKD   +  ++C P  G EL    E+   C ++ L  G     AL   D+DI ++    ++GNP  LP ID  D++R F +  GG L+LQFVR  +GGG +            + +  +RGG   VE G    A G  F     VG+  I +A D   V  A+         R++GG V+V  G V     +FW     + F +   +G D+LVVAG A  +G TFT + LF N  G GF VAVLGG  V + C      +A +A+GAG ++F+GGG  I +G    + A +  FS  G   + FVGGGV++ +G     +  +    G G  +++GGG +  TGVT             G   + GAG ++ VG   S         G GG    GAG  + +G+         +   +GG     AG ++ +G P      +++   LG   ++GAG  V+ GSP        Y +P  V+ Y+V G 
Sbjct:  106 LKD--FVGQNSCWPADGAELLDAVENQG-CELVVLSSGDPDAYAL---DEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPG----ALGANF-----VGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLPFTDQVSIGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFNVAVLGGNAVFTFCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAPILFFSGIG---DFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVETGVTYVQFNCPAHQGLTGASIFTGAGVSIHVGVPASFYGTTVLFTGQGGFSYNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAALVYFAGLGAVMYLGAGGAVIGGSPVFAPAFKFYSSPEGVANYYVQGN 577          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|585105443|gb|EWM24109.1| (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana])

HSP 1 Score: 159.458 bits (402), Expect = 8.076e-37
Identity = 172/586 (29.35%), Postives = 262/586 (44.71%), Query Frame = 0
Query:   45 EEKHASQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEVSTESLPDGPGGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGEL-----------IATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPD---VSRAV---------RVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGC--AWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPP-VSQYFVNGQ 604
            ++  A+ +  P    ++   +I+ V     PA+ API  +   P + S        G +             ++ L G + G+   A +       LKD   +  ++C P  G EL    E+   C ++ L  G     AL   D+DI ++    ++GNP  LP ID  D++R F +  GG L+LQFVR  +GGG +            + +  +RGG   VE G    A G  F     VG+  I +A D   V  A+         R++GG V+V  G V     +FW     + F +   +G D+LVVAG A  +G TFT + LF N  G GF VAVLGG  V + C      +A +A+GAG ++F+GGG  I +G    + A +  FS  G   + FVGGGV++ +G     +  +    G G  +++GGG +  TGVT             G   + GAG ++ VG   S         G GG    GAG  + +G+         +   +GG     AG ++ +G P      +++   LG   ++GAG  V+ GSP        Y +P  V+ Y+V G 
Sbjct:   37 QKDKAAVASEPNVASLDTDVNIKDVFDAAKPAETAPIKVDTWTPPKASEPEESASTGQTF--------TNANANALTGAIKGDPLQAIATMGADVNLKD--FVGQNSCWPADGAELLDAVENQG-CELVVLSSGDPDAYAL---DEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPG----ALGANF-----VGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLPFTDQVSIGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFNVAVLGGNAVFTFCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAPILFFSGIG---DFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVETGVTYVQFNCPAHQGLTGASIFTGAGVSIHVGVPASFYGTTVLFTGQGGFSYNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAALVYFAGLGAVMYLGAGGAVIGGSPVFAPAFKFYSSPEGVANYYVQGN 596          
BLAST of EWM25479.1 vs. NCBI_GenBank
Match: gi|553186171|ref|XP_005854372.1| (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >gi|422294687|gb|EKU21987.1| hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 148.288 bits (373), Expect = 2.026e-32
Identity = 151/557 (27.11%), Postives = 241/557 (43.27%), Query Frame = 0
Query:  151 ACVPQSGMELRQMAEDPSRCAIISL--LPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGAD---SKRIFHIVAGGNLDLQFVRTYRGGGE---------------------------LIATIPVLRGGTALVELGGRFSAF-GVIFTNAPPV--GMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFDFGFGAFLGDDDEENDGFVKKMMNRMKKKLGRDD 672
            AC PQ+  EL +  ++   C+++ L     + Y +        I +     I+G+P+ LP ID +    + R F +V GG LDLQ++R   G GE                           +   I   RGG+  +E G   + F GVIF +       +   + A       R +GG +F+ GG V  T  HFW     +   + + +G D+L++AG   ++  TFT++ +F +  G G +V +LGGV V + C    + +A ++SG G  + +GGGV I +G  +     V +  G G +     GV+V++G     + GV    G G   ++G GTL   GV+     G  F A AG   +VG+G+++ VG             GIGG    GAGV V VG+ +V+     S   +GG     AG    +GSP      + +        F G G  + +GS  AV   ++ +  P S+ +V+G A      NF + G+    A            K   +   +     + +N     + M R K++  R D
Sbjct:  138 ACYPQTADELVEAVQELD-CSLLFLTNFDPQAYLIT-----QHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGAGMVVGILGGVGVFTFCVIQESIIANHSSGPGQTILVGGGVQIITGMDFRLVAVVLAFVGFG-DFATAAGVLVMTGVTIENAYGVLFAVGAGFYTAVGSGTLVQIGVSYVQYCGPSFNALAGSSIFVGSGASINVGVPSLFAYSTNTFSGIGGFSYNGAGVSVWVGSPSVNWASTYSFFGLGGTLADSAGFTTFVGSPTFSAYALFY--------FAGQGGTLWKGSGGAV-VALSPVYAPASRQYVSGNA-----DNFYVAGRSFNDA------------KGLTYASRSKFASTNSKNKTNGMRKMTRHKQRRVRKD 661          
The following BLAST results are available for this feature:
BLAST of EWM25479.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107242|gb|EWM25479.1|0.000e+0100.00hypothetical protein Naga_100207g1 [Nannochloropsi... [more]
gi|585108908|gb|EWM26817.1|9.324e-5533.47Pectin lyase fold/virulence factor [Nannochloropsi... [more]
gi|585109935|gb|EWM27664.1|2.462e-4627.88hypothetical protein Naga_100125g7 [Nannochloropsi... [more]
gi|585102763|gb|EWM22289.1|6.865e-4430.49Pectin lyase fold/virulence factor [Nannochloropsi... [more]
gi|585104563|gb|EWM23493.1|2.201e-4330.91hypothetical protein Naga_100198g12 [Nannochlorops... [more]
gi|585108528|gb|EWM26475.1|3.658e-3930.23hypothetical protein Naga_100045g21 [Nannochlorops... [more]
gi|553185366|ref|XP_005854242.1|1.394e-3830.71hypothetical protein NGA_0025320 [Nannochloropsis ... [more]
gi|553183773|ref|XP_005853964.1|1.232e-3731.84hypothetical protein NGA_0462000 [Nannochloropsis ... [more]
gi|585105443|gb|EWM24109.1|8.076e-3729.35hypothetical protein Naga_100286g5 [Nannochloropsi... [more]
gi|553186171|ref|XP_005854372.1|2.026e-3227.11hypothetical protein NGA_0163600, partial [Nannoch... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5214rna5214Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications