EWM25498.1, cds5176 (CDS) Nannochloropsis gaditana

Overview
NameEWM25498.1
Unique Namecds5176
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:374387..374634 -
Alignment locationCM002465.1:374149..374260 -
Alignment locationCM002465.1:372841..373955 -
Alignment locationCM002465.1:372145..372694 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25498.1
ProductLMBR1-like membrane protein
Orig transcript idgnl|cribi|Naga_100032g43.241.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:374387..374634 -
CM002465.1supercontigCM002465.1:374149..374260 -
CM002465.1supercontigCM002465.1:372841..373955 -
CM002465.1supercontigCM002465.1:372145..372694 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006876LMBR1-like_membr_prot
Homology
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|585107264|gb|EWM25498.1| (LMBR1-like membrane protein [Nannochloropsis gaditana])

HSP 1 Score: 1368.6 bits (3541), Expect = 0.000e+0
Identity = 674/674 (100.00%), Postives = 674/674 (100.00%), Query Frame = 0
Query:    1 MMHSRPCNTHMIGRPADSFPLFVLVKQPVRRLLRKDKALKHRSEANSLCALIRAHPSLLSMDTDPEPAVLAILLALATFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDLGDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELDACMKILQDTRASFRHRPEDMTLGMLLPRTPFGVNSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLGSPYALSPYGAFQQAFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQEEMIQQGRSLARRRRYPLPSAGGNNRPGRGEDGFASGSVSLSGSGGGGKATTGTMRVQQELPPGPLRGSTAAYTQLKT 674
            MMHSRPCNTHMIGRPADSFPLFVLVKQPVRRLLRKDKALKHRSEANSLCALIRAHPSLLSMDTDPEPAVLAILLALATFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDLGDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELDACMKILQDTRASFRHRPEDMTLGMLLPRTPFGVNSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLGSPYALSPYGAFQQAFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQEEMIQQGRSLARRRRYPLPSAGGNNRPGRGEDGFASGSVSLSGSGGGGKATTGTMRVQQELPPGPLRGSTAAYTQLKT
Sbjct:    1 MMHSRPCNTHMIGRPADSFPLFVLVKQPVRRLLRKDKALKHRSEANSLCALIRAHPSLLSMDTDPEPAVLAILLALATFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDLGDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELDACMKILQDTRASFRHRPEDMTLGMLLPRTPFGVNSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLGSPYALSPYGAFQQAFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQEEMIQQGRSLARRRRYPLPSAGGNNRPGRGEDGFASGSVSLSGSGGGGKATTGTMRVQQELPPGPLRGSTAAYTQLKT 674          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|298711236|emb|CBJ32456.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 346.665 bits (888), Expect = 2.290e-106
Identity = 229/617 (37.12%), Postives = 332/617 (53.81%), Query Frame = 0
Query:   63 TDPEPAVLAILLALATFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDLGDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGA-EGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALR-----------------EQLRQSPPAGEELALELDACMKILQDTRASFRHRPEDMTLGMLLPRTPF-GVNSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDV-KAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLGSPYALSPYG-----AFQQAFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQT--------AFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEE--QEEMIQQGRSLARRRRYPLPSAGGNNRPGRGEDGFASGSVSLSGSGGGG 644
            TD     +A+L+A  T  L+ YY + DV   V++ ++ SWLLGF G  LLP D+    +      W+ + W  +YW+TF+L W++LPI++    +G  T  +RI  A+R  ++      V LV F IYLV    T AG+  G +MAL NTYGLLF+++LLG GL++VPR+LW++SF D EL+RLYF ++ VD+D HD++  L  VE  + ++                  + +  S  A +E A  L+      Q TR   ++  +    G    RTP   +     SG  P  A  A LH+ L+ AQ+ V   + +  A++ + + +  +    +P+   V +   GE  C  L       G    W W   L     + LA+L   L+   LWS+V   S + LSP+G      +QQ  G     ++Q A+ VP  Y+S+C YRSLF  ++FG FSLQG H +L GPLL NAQYLIRLQFPL YNF+ MLR   +K          AF+ LM++M+ VP+LG GF+VYAPL++V+L AFTY++GYAR+LRLVG  H DL+S ++      + +GR L  R +    +     R    +    S S S     GGG
Sbjct:   13 TDAIAFEVALLVAF-TAGLVWYYAAKDVPFLVSLCVFTSWLLGFIGTLLLPADIVLTLLDGSHSLWMTRAWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVIYLVVSGQTSAGSVSGFMMALANTYGLLFIILLLGQGLIQVPRQLWETSFNDTELQRLYFNATQVDTDKHDSLFELETVERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDE-AFHLETDDGSFQTTRFRGKNGSQRWDDG----RTPEDALKDLGVSGLSPGDA--ARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPGETVCHYLRTVLRRSGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVMAASRWNLSPFGILLRLMYQQEAGIGHALSMQAAVLVPFLYMSLCCYRSLFTLRIFGTFSLQGGHHTLPGPLLFNAQYLIRLQFPLGYNFMRMLRYYGTKSASVPALSLPAFQKLMNDMSTVPVLGTGFTVYAPLVLVILCAFTYYKGYARVLRLVGLEHVDLVSMDDPGGNARLDEGRELVERGKRQAQALAARRRDATVQQSPPSDSPSTKYEPGGG 621          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|675200993|ref|XP_008909381.1| (hypothetical protein PPTG_14146 [Phytophthora parasitica INRA-310] >gi|568090573|gb|ETN05406.1| hypothetical protein PPTG_14146 [Phytophthora parasitica INRA-310] >gi|970645856|gb|KUF86215.1| LMBR1 domain-containing protein 2 [Phytophthora nicotianae])

HSP 1 Score: 214.157 bits (544), Expect = 5.508e-57
Identity = 187/626 (29.87%), Postives = 299/626 (47.76%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQG----RSLARRRR--YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  + ++  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG    R L  R++  Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPTVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQNERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFMIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNALLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKKIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|568013361|gb|ETL87538.1| (hypothetical protein L917_13287 [Phytophthora parasitica])

HSP 1 Score: 214.157 bits (544), Expect = 5.910e-57
Identity = 187/626 (29.87%), Postives = 299/626 (47.76%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQG----RSLARRRR--YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  + ++  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG    R L  R++  Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPKVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQNERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFLIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNTLLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKKIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|566017798|gb|ETI40709.1| (hypothetical protein F443_13945 [Phytophthora parasitica P1569])

HSP 1 Score: 213.772 bits (543), Expect = 6.669e-57
Identity = 187/626 (29.87%), Postives = 298/626 (47.60%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQG----RSLARRRR--YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  +  +  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG    R L  R++  Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPTVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQDERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFMIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNTLLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKKIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|570976935|gb|ETP38644.1| (hypothetical protein F442_13780 [Phytophthora parasitica P10297])

HSP 1 Score: 213.772 bits (543), Expect = 7.156e-57
Identity = 187/626 (29.87%), Postives = 299/626 (47.76%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQG----RSLARRRR--YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  + ++  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG    R L  R++  Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPTVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQNERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFLIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNTLLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKKIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|570945248|gb|ETP10505.1| (hypothetical protein F441_13870 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 213.772 bits (543), Expect = 7.450e-57
Identity = 186/626 (29.71%), Postives = 300/626 (47.92%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQGRS-----LARRRR-YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  + ++  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG       ++R++R Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPTVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQNERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFLIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNALLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKRIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|568043472|gb|ETM40757.1| (hypothetical protein L914_13381 [Phytophthora parasitica])

HSP 1 Score: 213.772 bits (543), Expect = 7.756e-57
Identity = 187/626 (29.87%), Postives = 298/626 (47.60%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQG----RSLARRRR--YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  +  +  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG    R L  R++  Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPTVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQDERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFMIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNALLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKKIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|567983869|gb|ETL34252.1| (hypothetical protein L916_13480 [Phytophthora parasitica])

HSP 1 Score: 213.772 bits (543), Expect = 7.834e-57
Identity = 187/626 (29.87%), Postives = 298/626 (47.60%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQG----RSLARRRR--YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  +  +  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG    R L  R++  Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPKVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQDERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFMIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNALLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKKIYETGAAGG------GSYGFASAA 610          
BLAST of EWM25498.1 vs. NCBI_GenBank
Match: gi|567955205|gb|ETK80838.1| (hypothetical protein L915_13582 [Phytophthora parasitica])

HSP 1 Score: 213.386 bits (542), Expect = 9.203e-57
Identity = 186/626 (29.71%), Postives = 299/626 (47.76%), Query Frame = 0
Query:   68 AVLAILLALA-----TFYLLRYYRSPDVSPSVTVLIYISWLLGFAGVFLLPYDL------------GDVQVYHRSLPWILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLV-AQRYTLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALELD---ACM----KILQDTRASFRH-------RPEDMTLGMLLPRTPFGV-NSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEA-VCQGALP----YPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG---SPYALSPYGAFQQAFGTSSPF--AIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYN-FLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVG-AYHEDLISGE--------EQEEMIQQGRS-----LARRRR-YPLPSAGGNNRPGRGEDGFASGS 634
            A+LA LLA+      T++LL +Y+   V   V   ++ +W+LGF G+ LLP DL            G+V     S    L VW+ +YW+TF+++W+ LP +  + ++G F    RIL + R  +    +    L    +YL+     +L G  GL MA  NTYGLL+V+ LLG GLVE+PR  W       +L+ L+F +  +  +  +A     DV A+V    +++ Q+      L  E+     C+      ++ ++ +FR        +    ++     +   GV N    S   P+L     LH R++ AQL ++   +    +   V++++    Q ALP    YP              +              W+T+       + A++  FL++C +W ++ +G   S  +L  +    +A  TSS    A +L  A+ L Y+++C YRSLF  +L G++ L+    S    LL  + Y  RLQF L  N  LL+     ++ TAF  L++N  VV + GRGF+VYAPL M+ LA FT   GYAR++R +G   +E +I G+        E E ++QQG       ++R++R Y   +AGG      G  GFAS +
Sbjct:    2 ALLATLLAMCGLLGFTWWLLTHYKDAKVPTVVHAAVFSTWVLGFLGLILLPMDLATNGLVASSQSAGNVAEEKASFREYLAVWRLLYWATFLMSWVGLPFLVEFRQNGEFELDKRILSSFRHLVFHWTVLAGGLFIVALYLILVDHLSLYGVLGLAMAASNTYGLLWVIALLGYGLVEIPRGFWIRRLDGAQLQILHFEAVQLQDERMEARFEYDDVVADVHDAYQRMVQAESDAIILTSEMQYVKTCLLQVVAAIEKSKPAFRRLDTSNDTKRGSKSVSFSDSKMKRGVSNIGRASRKAPTLTETIELHRRVRIAQLELRRCDQAFLELCINVDILQDRSAQRALPAGSLYPETSALNRLHNIFLNMRHQLRQ--------WVTSPVAI---VCAVVTGFLSLCVVWGELTMGWRRSSLSLFRFLIAVEAMETSSSLRSATELISALVLVYLALCCYRSLFTLRLPGKYVLRAHGNSTELCLLKTSIYQCRLQFALGQNALLLLRGGGLAEGTAFNALLANTRVVHVFGRGFAVYAPLAMIALAVFTLTNGYARVMRRLGIEQYEQIIPGDSTHAASIAEGERLVQQGLERFRVLISRKKRIYETGAAGG------GSYGFASAA 610          
The following BLAST results are available for this feature:
BLAST of EWM25498.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107264|gb|EWM25498.1|0.000e+0100.00LMBR1-like membrane protein [Nannochloropsis gadit... [more]
gi|298711236|emb|CBJ32456.1|2.290e-10637.12conserved unknown protein [Ectocarpus siliculosus][more]
gi|675200993|ref|XP_008909381.1|5.508e-5729.87hypothetical protein PPTG_14146 [Phytophthora para... [more]
gi|568013361|gb|ETL87538.1|5.910e-5729.87hypothetical protein L917_13287 [Phytophthora para... [more]
gi|566017798|gb|ETI40709.1|6.669e-5729.87hypothetical protein F443_13945 [Phytophthora para... [more]
gi|570976935|gb|ETP38644.1|7.156e-5729.87hypothetical protein F442_13780 [Phytophthora para... [more]
gi|570945248|gb|ETP10505.1|7.450e-5729.71hypothetical protein F441_13870 [Phytophthora para... [more]
gi|568043472|gb|ETM40757.1|7.756e-5729.87hypothetical protein L914_13381 [Phytophthora para... [more]
gi|567983869|gb|ETL34252.1|7.834e-5729.87hypothetical protein L916_13480 [Phytophthora para... [more]
gi|567955205|gb|ETK80838.1|9.203e-5729.71hypothetical protein L915_13582 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5188rna5188Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications