EWM25530.1, cds5153 (CDS) Nannochloropsis gaditana

Overview
NameEWM25530.1
Unique Namecds5153
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:304675..304717 +
Alignment locationCM002465.1:304851..304987 +
Alignment locationCM002465.1:305133..305389 +
Alignment locationCM002465.1:305495..305915 +
Alignment locationCM002465.1:306050..306323 +
Alignment locationCM002465.1:306451..306533 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25530.1
Productring u-box domain-containing protein
Orig transcript idgnl|cribi|Naga_100032g18.273.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:304675..304717 +
CM002465.1supercontigCM002465.1:304851..304987 +
CM002465.1supercontigCM002465.1:305133..305389 +
CM002465.1supercontigCM002465.1:305495..305915 +
CM002465.1supercontigCM002465.1:306050..306323 +
CM002465.1supercontigCM002465.1:306451..306533 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Homology
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|585107296|gb|EWM25530.1| (ring u-box domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query:    1 MGNHSASMTPPNAQDRQPPPGSQEAYSGIRFETRPGIGRLFSGTADAAAAAANAANGRVWVVNPPRRPQTVVQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLEDNDHRRSSSSSEGLVS 404
            MGNHSASMTPPNAQDRQPPPGSQEAYSGIRFETRPGIGRLFSGTADAAAAAANAANGRVWVVNPPRRPQTVVQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLEDNDHRRSSSSSEGLVS
Sbjct:    1 MGNHSASMTPPNAQDRQPPPGSQEAYSGIRFETRPGIGRLFSGTADAAAAAANAANGRVWVVNPPRRPQTVVQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLEDNDHRRSSSSSEGLVS 404          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|731364310|ref|XP_010693906.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Beta vulgaris subsp. vulgaris] >gi|870846133|gb|KMS98738.1| hypothetical protein BVRB_3g069180 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 115.161 bits (287), Expect = 8.062e-25
Identity = 104/395 (26.33%), Postives = 168/395 (42.53%), Query Frame = 0
Query:    4 HSASMTPPNAQDRQPPPGSQEAYSGIRFETRPGIGRLFSGTADAAAAAANAANGRVWVVNPPRR--------PQTVVQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYI-VMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLED 389
            H     PP  Q     PG   +Y+        G G+   G ++      N  NG   +  PP +        P    Q  K++KN  ++HKDT++L        E  +D  D       Y +SF FD+    ++ +Y+ A E KE       TP+ P+  +    P  FQ G  Q +  + TG TG DL              +  + G+ S      L +Y  V   SQ+ D+V G     +                     PR +  +   E + E  ++VK IKQ +  +   Y L+++YGI  +++          +G  D        +E G+ +CV+C+T  +  A++PCRH+C+C DCA E ++ Q +KCPICR P   L+++ + +
Sbjct:   83 HFQYQHPPPIQSNYYYPGWSNSYNYQNPMMGQGQGQ---GRSNVGYIQGNYGNGWHQMRYPPPQSSMLLPPPPYVEHQSAKVVKNDVNVHKDTIKL--------ELDEDYSD------HYLVSFVFDAHFDGSITIYYFAMEEKETC---TFTPVYPEASSSVKVP--FQKGVGQRFR-QPTG-TGVDLG-----------FFDLESLGKPSDDDVFPLVIYAEVCSSSQEADDVTGKSSTED--------------------FPRVQVTQAIIEKKNEYSFQVKAIKQILWIDGVRYELRDLYGIGNSSS----------EGFND--------DEPGK-ECVICMTEAKNTAVIPCRHLCMCSDCAKE-LRLQSNKCPICRQPISELIEIKINN 402          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|1183365473|gb|ORX91900.1| (hypothetical protein K493DRAFT_47722 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 111.309 bits (277), Expect = 2.280e-24
Identity = 87/298 (29.19%), Postives = 132/298 (44.30%), Query Frame = 0
Query:  104 DMKDGGGDK-ARYHLSFRFDSEQPCTVAVYWVARENKE-----AAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYST------KATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGV----NLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKL 385
            D++D  G    RY L F+FDS  PC + +YW A+E  E        HL +    P +   T     F  G NQ +S         T +   DL      +     +  P+    ES  G ES     +  P  D   ++ G   A Q    +    I +L      + VP   +    L         ++ + +KQKI+ N   ++LQEIYG + ++  P  DT             +D  E     +CV+C+++ R+  +LPCRHMC+C++C AE ++ Q SKCPICR P  +LL +
Sbjct:    7 DLQDENGVTGIRYSLQFKFDSLYPCRIKLYWCAKEIWEDGEASVRYHLKY----PSQTLQTY---EFPKGLNQNFSLPSDQLLNVTKFQPDDL-----VMNTPKNMDSPKP---ESHQGSESDVEVEIKEPVLDSIVIEDGASSASQ--SSEYYPLIIVLEAVTSDDTVPDVLSTFATLTVNSSG--VYDTQPLKQKIKMNGASFILQEIYGYSESSPHP--DT-------------SDTNESNSARECVICMSDPRDTTVLPCRHMCLCKEC-AEVLRCQSSKCPICRQPFHSLLHI 269          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|1214708242|gb|OWZ19546.1| (RING zinc finger [Phytophthora megakarya])

HSP 1 Score: 112.464 bits (280), Expect = 3.673e-24
Identity = 95/346 (27.46%), Postives = 147/346 (42.49%), Query Frame = 0
Query:   60 WVVNPPRRPQTV--VQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKE-----AAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPL----PRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTG--DAPAGADREEETGR-ADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLEDND 391
            ++ N  R P  V  +Q+T  +KN  +L K +L+L  S                D  +Y L F+FD+ +PC ++VY V  E  +     ++  L H      ++T       F +G  Q +  K                   G + E  T  EE              R  Q    +D    + +++       Q  L+ +  V      P+++        + E+ W++K +KQKI  +   Y LQEIYGI G  A      +   DG G  D    A  E E    A+C++C+   R   +LPCRHMC+C +C AE ++   S CPICR P +ALL++ +E  D
Sbjct:   52 FMSNQTRTPVDVPELQQTCTVKNHVNLKKPSLKLQRS--------------PTDPLQYALEFQFDATKPCRISVYLVVVETIDTETGGSSFELVH------EDTIPVLTQHFPSGLGQNFVLK-------------------GGLKEEETDVEE--------------RLDQPVPLLDFSPYDPDELVYKTGTTQFPLIILLEVASDRKRPQSQSTFCTFVKKGEDLWDIKMLKQKILVDGLTYELQEIYGIDGAVAAAPKAERNGADGDGQDDTTRTAKDEIEIPEGAECIICMCEPRNTTVLPCRHMCLCSEC-AEALRKSASTCPICRTPVEALLQIRVEAKD 343          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|566024952|gb|ETI47863.1| (hypothetical protein F443_08003 [Phytophthora parasitica P1569])

HSP 1 Score: 107.071 bits (266), Expect = 3.408e-22
Identity = 94/328 (28.66%), Postives = 144/328 (43.90%), Query Frame = 0
Query:   72 VQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEA-----AGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDN--VDGGGKEAEQMPDGDVRAQITLLGVNLVP----LPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREV--DGTGDAPAGADREEETGR-ADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKL 385
            +Q+T  +KN  +L K +L+L  S                +  +Y L F+FD+ +PC ++VY VA E  +A     +  L H+    DK    + P  F +G  Q +  K                            G+E    KE   V  V + +Q++    +D    + +++       Q  L+ V  V      P+++        + E+ W++K +KQKI  +   Y LQEIYGI G  A      +  V  DG  D    A  E E    A+C++CL   R   ILPCRHMC+C +C AE ++   S CPICR   +ALL++
Sbjct:   66 LQQTCTVKNQVNLKKASLKLQRSL--------------TEPQQYALEFQFDATKPCRISVYLVATETIDANTGGSSFELVHS----DKNPVLSQP--FPSGLAQVFVLK----------------------------GDE----KEENTVQEVDQETQEQPLPLLDFSPYDPDELVYKANTTQFPLIIVLEVSPDKKRPQSQTTFCTFVKKGEDVWDIKMLKQKILVDGLTYELQEIYGIDGAVAAAPKTERNGVSGDGQTDTSQTAKDEIEIPEGAECIICLCEPRNTTILPCRHMCLCSEC-AEALRKSSSTCPICRTRVEALLQI 340          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|545366507|ref|XP_005648141.1| (hypothetical protein COCSUDRAFT_47360 [Coccomyxa subellipsoidea C-169] >gi|384250117|gb|EIE23597.1| hypothetical protein COCSUDRAFT_47360 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 106.686 bits (265), Expect = 4.780e-22
Identity = 89/332 (26.81%), Postives = 135/332 (40.66%), Query Frame = 0
Query:   70 TVVQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGAD--LSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLEDNDHRRSSSSS 399
            T + +T  I+N  +L K TLRL              +   GD +R  + F FD+ +PC+V  + V  E+   +  L        K+  T  P  ++ G   ++      +   D  L   R+     G                E+  + + M    +K   DG   + E  P    +  +       V +   EGG           W  + +KQKI      Y LQEIYG+  +A+ PS               G    EE     CV+CL N+R+  +LPCRH+C+C DCA E ++ Q SKCPICRN  ++LL + +     +    SS
Sbjct:   84 TELTQTATIRNAVNLKKPTLRL--------------EPVDGDSSRLAVHFNFDASEPCSVTTFVVVMEDPSKSCALTQL-----KQAITE-PVLYEKGLVLKFPKDGAAHAVLDVGLYEDRELTSADG----------------ETYPLVVRMETITEKGKADGHTLQ-ELRPGAAQKVWVQSQTTFAVLVKDEEGG-----------WGARVLKQKIWVEGVSYELQEIYGMENSASVPS--------------VGEGTLEENEERLCVICLVNERDTTVLPCRHLCMCHDCAQE-LRKQTSKCPICRNHVESLLHIKMAQRKSKPQVDSS 352          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|675191735|ref|XP_008904752.1| (hypothetical protein PPTG_10968 [Phytophthora parasitica INRA-310] >gi|567962257|gb|ETK87784.1| hypothetical protein L915_07828 [Phytophthora parasitica] >gi|567990985|gb|ETL41203.1| hypothetical protein L916_07758 [Phytophthora parasitica] >gi|568020237|gb|ETL94371.1| hypothetical protein L917_07643 [Phytophthora parasitica] >gi|568050657|gb|ETM47591.1| hypothetical protein L914_07721 [Phytophthora parasitica] >gi|568095547|gb|ETN10315.1| hypothetical protein PPTG_10968 [Phytophthora parasitica INRA-310] >gi|570328620|gb|ETO76568.1| hypothetical protein F444_08048 [Phytophthora parasitica P1976] >gi|570952434|gb|ETP17691.1| hypothetical protein F441_07972 [Phytophthora parasitica CJ01A1] >gi|570986753|gb|ETP45682.1| hypothetical protein F442_07941 [Phytophthora parasitica P10297] >gi|970644850|gb|KUF85529.1| RING finger protein [Phytophthora nicotianae] >gi|970657055|gb|KUF94987.1| hypothetical protein AM588_10005063 [Phytophthora nicotianae])

HSP 1 Score: 106.301 bits (264), Expect = 5.100e-22
Identity = 94/328 (28.66%), Postives = 144/328 (43.90%), Query Frame = 0
Query:   72 VQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEA-----AGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDN--VDGGGKEAEQMPDGDVRAQITLLGVNLVP----LPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREV--DGTGDAPAGADREEETGR-ADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKL 385
            +Q+T  +KN  +L K +L+L  S                +  +Y L F+FD+ +PC ++VY VA E  +A     +  L H+    DK    + P  F +G  Q +  K                            G+E    KE   V  V + +Q++    +D    + +++       Q  L+ V  V      P+++        + E+ W++K +KQKI  +   Y LQEIYGI G  A      +  V  DG  D    A  E E    A+C++CL   R   ILPCRHMC+C +C AE ++   S CPICR   +ALL++
Sbjct:   66 LQQTCTVKNHVNLKKASLKLQRSL--------------TEPQQYALEFQFDATKPCRISVYLVATETIDANTGGSSFELVHS----DKNPVLSQP--FPSGLAQVFVLK----------------------------GDE----KEENTVQEVDQETQEQPLPLLDFSPYDPDELVYKANTTQFPLIIVLEVSPDKKRPQSQTTFCTFVKKGEDVWDIKMLKQKILVDGLTYELQEIYGIDGAVAAAPKTERNGVSGDGQTDTSQTAKDEIEIPEGAECIICLCEPRNTTILPCRHMCLCSEC-AEALRKSSSTCPICRTRVEALLQI 340          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|695428019|ref|XP_009529847.1| (RING zinc finger-like protein [Phytophthora sojae] >gi|348676280|gb|EGZ16098.1| RING zinc finger-like protein [Phytophthora sojae])

HSP 1 Score: 105.916 bits (263), Expect = 7.080e-22
Identity = 102/333 (30.63%), Postives = 148/333 (44.44%), Query Frame = 0
Query:   60 WVVNPPRRPQTV--VQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEA-AGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNL-VPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAG-TAAGP-SDDTKREVDGTGDAPAGADREEETGR-ADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKL 385
            ++ N  R P  V  +Q+T  +KN  +L K +L+L              +    D   Y L F+FD+ +PC ++V+ VA E   A  G      +  DK    A    F +G  Q +  K  G T  D S+  +      +  +P      S    + L    V +P             A Q P       I +L V+     P+++        + E  W+VK +KQKI  +   Y LQEIYGI G  AA P ++ T    +GT DA      E E    A+C++CL   R   ILPCRHMC+C +C AE ++   S CPICR   +ALL++
Sbjct:   52 FMSNQGRLPVEVPELQQTCTVKNHVNLKKASLKL--------------QQSPTDPNHYALEFQFDATKPCRISVFLVATETINADTGSSSFALVHADKNPVLA--QHFPSGLGQIFVLKE-GETEDDASKEEE----HEKHEQPLPLLNFSMYDPDEL----VYKPG------------AVQFP------LIVVLEVSSDRKRPQSQSTFCTFVKKGENTWDVKMLKQKILVDGLTYELQEIYGIDGMVAAAPKTERTGAAGEGTIDAAQAPKDEIEIPEGAECIICLCEPRNTTILPCRHMCLCSEC-AEALRKSSSTCPICRTRVEALLQI 340          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|1079253436|ref|XP_018499731.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Pyrus x bretschneideri] >gi|1079253438|ref|XP_018499732.1| PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Pyrus x bretschneideri] >gi|1079253440|ref|XP_018499733.1| PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Pyrus x bretschneideri])

HSP 1 Score: 105.531 bits (262), Expect = 2.636e-21
Identity = 89/315 (28.25%), Postives = 138/315 (43.81%), Query Frame = 0
Query:   73 QRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKESLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTL 387
            Q  K +KN  ++ KDTLRL +      E   D         ++ +SF FD+    +V V++ A+E  E        PL P+       P  FQ G  Q++   +   TG DL            + +P  G +   V    ++    + P    ++V       E  PD   R QIT   +               E    + ++VK I+Q +  +E  Y L+EIYGI  +     DDT                  E G+ +CV+C+T  ++ A+LPCRHMC+C DCA E ++ Q +KCPICR P + L+++ +
Sbjct:  186 QNAKKVKNDVNVRKDTLRLEID-----ELNPD---------QHLVSFVFDAMYDGSVTVFYFAKEEPECR----FVPLFPEAFIPVRVP--FQKGLGQKFRQPSG--TGIDL-----GFFELDDLSKPSPGED---VFPLVISAETCLPPDSTDEHV------GEPAPDASPRMQITQAVL---------------EKNNGDHFQVKVIRQILWIDEVRYELREIYGIGTSTVESFDDT------------------EPGK-ECVICMTEPKDTAVLPCRHMCMCTDCAKE-LRIQSNKCPICRQPIEELIEIKI 429          
BLAST of EWM25530.1 vs. NCBI_GenBank
Match: gi|147770085|emb|CAN69886.1| (hypothetical protein VITISV_005072 [Vitis vinifera])

HSP 1 Score: 102.834 bits (255), Expect = 2.862e-21
Identity = 96/343 (27.99%), Postives = 153/343 (44.61%), Query Frame = 0
Query:   50 AAANAANGRVWV--VNPPRRPQTVVQRTKMIKNTCHLHKDTLRLGVSREKETETGKDMKDGGGDKARYHLSFRFDSEQPCTVAVYWVARENKEAAGHLCHTPLLPDKETWTAGPDRFQAGHNQEYSTKATGYTGADLSRARQALGGSGRVGEPRTGGEESAVGKE-SLNVYIVMRPSQDKDNVDGGGKEAEQMPDGDVRAQITLLGVNLVPLPRAEGGELQGEGRREERWEVKRIKQKIETNEGIYVLQEIYGIAGTAAGPSDDTKREVDGTGDAPAGADREEETGRADCVVCLTNKRELAILPCRHMCVCRDCAAECIQNQDSKCPICRNPAQALLKLTLED 389
            A AN   GR     V PP  P    Q+   I+N  +L K+TLRL    E                 R+ ++F FD+  P ++ + + A+E ++ +       L P KE        FQ G  Q++  + TG TG D S                   EES + KE  ++VY  +    +   ++  G +   +P G + +QIT          +A   + +GE      ++V+ +KQ +  N   Y LQEIYGI  +           VDG  D+        + G+ +CV+CL+  R+  +LPCRHMC+C  C A+ ++ Q  +CPICR   + LL++ + +
Sbjct:   24 AHANFVAGRYSCGPVVPPHAPYVEHQKAVTIRNDVNLKKETLRLEPDEEH--------------PGRFLVAFTFDATVPGSITIIFFAKEGEDCS-------LSPMKENLEPVTVHFQQGLGQKFR-QPTG-TGIDFSTF-----------------EESELLKEGDMDVY-PLEVKAEASPINQIGADGNPIP-GTMNSQIT----------KAVFEKEKGE------YQVRVVKQILWVNGMRYELQEIYGIGNS-----------VDGDFDS-------NDPGK-ECVICLSEPRDTTVLPCRHMCMCSGC-AKVLRFQTDRCPICRQLVERLLEIKVSN 288          
The following BLAST results are available for this feature:
BLAST of EWM25530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107296|gb|EWM25530.1|0.000e+0100.00ring u-box domain-containing protein [Nannochlorop... [more]
gi|731364310|ref|XP_010693906.1|8.062e-2526.33PREDICTED: probable E3 ubiquitin-protein ligase LU... [more]
gi|1183365473|gb|ORX91900.1|2.280e-2429.19hypothetical protein K493DRAFT_47722 [Basidiobolus... [more]
gi|1214708242|gb|OWZ19546.1|3.673e-2427.46RING zinc finger [Phytophthora megakarya][more]
gi|566024952|gb|ETI47863.1|3.408e-2228.66hypothetical protein F443_08003 [Phytophthora para... [more]
gi|545366507|ref|XP_005648141.1|4.780e-2226.81hypothetical protein COCSUDRAFT_47360 [Coccomyxa s... [more]
gi|675191735|ref|XP_008904752.1|5.100e-2228.66hypothetical protein PPTG_10968 [Phytophthora para... [more]
gi|695428019|ref|XP_009529847.1|7.080e-2230.63RING zinc finger-like protein [Phytophthora sojae]... [more]
gi|1079253436|ref|XP_018499731.1|2.636e-2128.25PREDICTED: probable E3 ubiquitin-protein ligase LU... [more]
gi|147770085|emb|CAN69886.1|2.862e-2127.99hypothetical protein VITISV_005072 [Vitis vinifera... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5165rna5165Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications