EWM25517.1, cds5152 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|585107283|gb|EWM25517.1| (gnat family [Nannochloropsis gaditana]) HSP 1 Score: 612.453 bits (1578), Expect = 0.000e+0 Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0 Query: 1 MFRNHSCDSSCRITGEMGWKSEENGSKRQRRRNGAVDFKLPSLILLLPVLQLLPLVASLQLQHSTCLRSSLTAIYSASSRGCRASSSTSIKSGSLNIFPAAVTSSAPNLSLPRTLSQIEIRRATVRDFPAIASTRKTIIFVPKQGGGNGAGVVRRALENASSQEEREMLSKIPYLVTGQAIAFIAIGKPKISLGGSGSSRVIGTVDVFERDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTRGPLDSLWRLLKIGKVTMTKRL 302 MFRNHSCDSSCRITGEMGWKSEENGSKRQRRRNGAVDFKLPSLILLLPVLQLLPLVASLQLQHSTCLRSSLTAIYSASSRGCRASSSTSIKSGSLNIFPAAVTSSAPNLSLPRTLSQIEIRRATVRDFPAIASTRKTIIFVPKQGGGNGAGVVRRALENASSQEEREMLSKIPYLVTGQAIAFIAIGKPKISLGGSGSSRVIGTVDVFERDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTRGPLDSLWRLLKIGKVTMTKRL Sbjct: 1 MFRNHSCDSSCRITGEMGWKSEENGSKRQRRRNGAVDFKLPSLILLLPVLQLLPLVASLQLQHSTCLRSSLTAIYSASSRGCRASSSTSIKSGSLNIFPAAVTSSAPNLSLPRTLSQIEIRRATVRDFPAIASTRKTIIFVPKQGGGNGAGVVRRALENASSQEEREMLSKIPYLVTGQAIAFIAIGKPKISLGGSGSSRVIGTVDVFERDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTRGPLDSLWRLLKIGKVTMTKRL 302
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|298706850|emb|CBJ25814.1| (acetyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 87.0409 bits (214), Expect = 6.142e-16 Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 0 Query: 116 SQIEIRRATVRDFPAIASTRKTIIFVPKQG--GGNGAGVVRRALENASSQEEREMLSKIPYLVTGQAIAFIAIGKPKISLGGSGSSRVI-----GTVDVFERDREGPSLPR--RLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTR--GPLD-----SLWRLLKIGKVTMTK 300 +++ +RRA D+ +A R II V G G G VV +++ + E R +++K+ LV+G+++A IA+ +I G+ I TVD + ++ P +P+ +FLKN+ V P+ RRQG+AR L+ E AR+ + + L+V N+AA+ LY GFE GP++ +L R L +GK M K Sbjct: 135 ARVTVRRAREPDYQGVAEIRGVIIPVGMSGATGFLGGKVV---IDDPAEAERRLLMAKVADLVSGESVALIALEGQRIV----GTVDCIIRSAAATVDTLGQPKQQPEIPKANEVFLKNLFVLPERRRQGIARELVNGAEVFARQEKARTVCLDVARQNDAARELYLSCGFEEAERPGPIEGGMGGALLRSLGMGKKYMVK 328
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|493499061|ref|WP_006453587.1| (N-acetyltransferase [Synechococcus sp. PCC 7335] >gi|196188879|gb|EDX83843.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7335]) HSP 1 Score: 71.2478 bits (173), Expect = 3.255e-11 Identity = 31/89 (34.83%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 191 ISLGGSGSSRVIGTVDVFERDREGPSL--PRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGF 277 + + + S +++GT ++ +R E L P+R ++ N+ +P +RRQG+A++LL +E A G +++L V+A+N AA+ALYE G+ Sbjct: 72 VDVTSAQSGKIVGTAEISQRPCEAWRLLPPKRAYISNLATEPAYRRQGVAQQLLHTSEKIAFNWGFHQVYLHVMADNSAARALYERAGY 160
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|504989978|ref|WP_015177080.1| (GCN5-related N-acetyltransferase [Oscillatoria nigro-viridis] >gi|428242031|gb|AFZ07817.1| GCN5-related N-acetyltransferase [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 71.2478 bits (173), Expect = 3.801e-11 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0 Query: 198 SSRVIGTVDVFERDREGPSLPR--RLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGF 277 + R+ GTV++ R R +P +L N+ V P++RRQG+A++LL+ E+ ARE G EI+L VL NN AA+ LY + G+ Sbjct: 97 AQRITGTVEMALRSRFPWQIPNSDYPYLSNLAVHPEYRRQGVAQQLLSNCEETAREWGFSEIYLHVLENNHAARQLYYQAGY 178
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|551570780|ref|XP_005771311.1| (hypothetical protein EMIHUDRAFT_102363 [Emiliania huxleyi CCMP1516] >gi|485622519|gb|EOD18882.1| hypothetical protein EMIHUDRAFT_102363 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.633 bits (174), Expect = 3.941e-11 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0 Query: 201 VIGTVDVFE------RDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTRGP 283 VIGTVD R GP LP+RL ++N+ V FRRQG+ RRL+ E+ A E+ I+ + L+VLA+NE A+ LYE GF P Sbjct: 106 VIGTVDCVALPAGKGRRAMGPELPQRLLIRNLWVAEAFRRQGIGRRLMDAAEELAAEMHIEFLSLDVLADNEPARRLYESLGFTDLEPP 194
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|1181368891|ref|WP_084669072.1| (hypothetical protein [Spirulina major]) HSP 1 Score: 71.633 bits (174), Expect = 4.319e-11 Identity = 61/227 (26.87%), Postives = 97/227 (42.73%), Query Frame = 0 Query: 82 CRASSSTSIKSGSLNIFPAAVTSSAPNLSLPRTLSQIEIRRATVRDFPAIASTRKTIIFVPKQGGGNGAGVVRRALENASSQEEREMLSKIPYLVTGQAIAFIAIGKPKISLGGSGSSRVIGTVDVFERDREGPSLPRRL-----FLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEY-TRGPLDSLWRLLKIGKVTMTKRL 302 C + ++ + P++ S+A +L+ PR + I IR AT D P +A P ++R ++ R L Q F A+ P + +VIGTV+V R P RR ++ N+ V P +RR+G+ARRLL E AR+ G + I+L VL N+ A+ LY+ G+ P W + ++ + K L Sbjct: 17 CSSPFLNTVLDSCYSPAPSSAVSAADDLTCPR--AAIAIRHATAADIPRLAEVLTDSFHPPTSVMFWMQPLIRFGIQEDLRARFRADLP--------QYCCFAAVSHP--------TEQVIGTVEVSVR----PLTWRRYTVEYPYISNLAVHPHYRRRGVARRLLLGCEPKARDWGFEAIYLHVLNRNQPAQQLYQGLGYHIEDSAPNYGGWEWFQPQRLLLYKSL 221
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|493684331|ref|WP_006634463.1| (N-acetyltransferase [Microcoleus vaginatus] >gi|333457248|gb|EGK85873.1| GCN5-related N-acetyltransferase [Microcoleus vaginatus FGP-2]) HSP 1 Score: 71.2478 bits (173), Expect = 4.499e-11 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 200 RVIGTVDVFERDREGPSLPR--RLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGF 277 R+ GTV++ R R +P +L N+ V PD+RRQG+A++LL+ E+ ARE G EI+L VL NN AA+ LY + G+ Sbjct: 99 RMAGTVEMALRSRFPWQIPSSDYPYLSNLAVHPDYRRQGVAQQLLSNCEETAREWGFSEIYLHVLENNHAARQLYYQAGY 178
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|501599676|ref|WP_012599262.1| (N-acetyltransferase [Cyanothece sp. PCC 7424] >gi|218171586|gb|ACK70319.1| GCN5-related N-acetyltransferase [Cyanothece sp. PCC 7424]) HSP 1 Score: 70.8626 bits (172), Expect = 6.655e-11 Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 0 Query: 182 AFIAIGKPKISLGGSGSSRVIGTVDVFERDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTRGPLD-SLW------RLLKIGKVTMTK 300 F+A + S +IGTV++ R E P P ++ N+ V RRQG+AR+LL + E A E G KE++L VL +N AK LY G++ R + + W RL I K+T T+ Sbjct: 82 CFVACHQVITSTSTKEQEEIIGTVEISLRS-EWPGTPPTAYISNLAVSSHCRRQGIARKLLLKCEQIALEWGFKELYLHVLEDNHVAKQLYLSSGYQLHRIDFNLNSWLFGSPRRLCLIKKLTHTE 206
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|551570706|ref|XP_005771274.1| (hypothetical protein EMIHUDRAFT_102336 [Emiliania huxleyi CCMP1516] >gi|485622482|gb|EOD18845.1| hypothetical protein EMIHUDRAFT_102336 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0182 bits (175), Expect = 7.494e-11 Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 201 VIGTVDVFE------RDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGF 277 VIGTVD R GP LP+RL ++N+ V FRRQG+ RRL+ E+ A E+ I+ + L+VLA+NE A+ LYE GF Sbjct: 106 VIGTVDCVALPAGKGRRAMGPELPQRLLIRNLWVAEAFRRQGIGRRLMDAAEELAAEMHIEFLSLDVLADNEPARRLYEGLGF 188
BLAST of EWM25517.1 vs. NCBI_GenBank
Match: gi|505039848|ref|WP_015226950.1| (N-acetyltransferase [Halothece sp. PCC 7418] >gi|428691783|gb|AFZ45077.1| GCN5-related N-acetyltransferase [Halothece sp. PCC 7418]) HSP 1 Score: 68.9366 bits (167), Expect = 2.317e-10 Identity = 38/109 (34.86%), Postives = 62/109 (56.88%), Query Frame = 0 Query: 195 GSGSSRVIGTVDVFERDREG--PSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTR-GPLDSLWRLLKIGKVTMTK 300 + + ++ GTV++ EG P + ++ N+ V P +RRQG+A+RLL E +R+ G K+I+L VL NNE A+ LY G++ R P + W L + +V + K Sbjct: 87 AASTGKITGTVELGLNCPEGWIPKQYQSTYISNLAVSPQYRRQGIAQRLLRSCEQVSRQWGFKQIYLHVLDNNEGAQKLYARSGYQQCRIEPSVTAWLLKQPRRVLLGK 195 The following BLAST results are available for this feature:
BLAST of EWM25517.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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