EWM25514.1, cds5142 (CDS) Nannochloropsis gaditana

Overview
NameEWM25514.1
Unique Namecds5142
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:278618..278733 +
Alignment locationCM002465.1:278946..279203 +
Alignment locationCM002465.1:279509..279674 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25514.1
Productprotein kinase wee1
Orig transcript idgnl|cribi|Naga_100032g4.257.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:278618..278733 +
CM002465.1supercontigCM002465.1:278946..279203 +
CM002465.1supercontigCM002465.1:279509..279674 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|585107280|gb|EWM25514.1| (protein kinase wee1 [Nannochloropsis gaditana])

HSP 1 Score: 361.303 bits (926), Expect = 2.598e-126
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLVSGSATADQGSRNNDTLLDWRRMSGRNGTEQDQFNGRGSSARLRPRVGRILWSR 179
            MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLVSGSATADQGSRNNDTLLDWRRMSGRNGTEQDQFNGRGSSARLRPRVGRILWSR
Sbjct:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLVSGSATADQGSRNNDTLLDWRRMSGRNGTEQDQFNGRGSSARLRPRVGRILWSR 179          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|168046767|ref|XP_001775844.1| (predicted protein [Physcomitrella patens] >gi|162672851|gb|EDQ59383.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 83.1889 bits (204), Expect = 5.631e-16
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLVSGSATADQGSR 137
            +DVKP NI++  +G +KLGD G A++ADGSM + EGD RY+ +E+L                  + L   D+F LGA++YE    +PL  +G +F ++REG+L+ LP         G+   L+N+       D  +R
Sbjct:  157 LDVKPDNIYVL-NGVYKLGDFGRAVRADGSMEIEEGDARYMPLEILND--------------DHSQLTKVDMFSLGATIYELARGLPLPTSGAQFQSLREGKLSLLP---------GYSLTLQNIFKALLNPDASAR 269          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|669147110|ref|XP_008609117.1| (WEE/WEE1 protein kinase [Saprolegnia diclina VS20] >gi|530739355|gb|EQC37597.1| WEE/WEE1 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 83.5741 bits (205), Expect = 1.477e-15
Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRL 103
            MD+K  N+  AA+G +KLGDLG  +  DG+M ++EGD RYLS E+L+G               R+ L   DIF LGAS+YE    VPL   G E+  +R+G L
Sbjct:  664 MDIKVDNMLRAANGVYKLGDLGTVVSMDGAMEIMEGDYRYLSRELLEG--------------NRSHLSAGDIFALGASIYELARGVPLPSEGDEWQTIRDGDL 752          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|1091522339|ref|XP_018722491.1| (PREDICTED: wee1-like protein kinase [Eucalyptus grandis])

HSP 1 Score: 77.7962 bits (190), Expect = 1.266e-14
Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLVSGSATA 132
            +DVKP NI++  +G +KLGD G A + + S+ V EGD RY+  E+L   D F              L+  DIF +GAS+YE     PL  +GP+FL +REG+L  LP +     S  F+  L+ ++    T 
Sbjct:   64 LDVKPDNIYVK-NGVYKLGDFGCATQLNSSLPVEEGDARYMPQEILN--DNFDH------------LDKVDIFSMGASMYELIRGSPLPESGPQFLNLREGKLPLLPGH-----SLHFQNLLKVMMDPDPTT 175          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|813163899|ref|XP_012203010.1| (WEE protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641532272|gb|KDO26309.1| WEE protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 79.337 bits (194), Expect = 5.110e-14
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRL 103
            MD+K  N+  A +G +KLGDLG  +  DG+M ++EGD RYLS E+L+G +   LSAG             DIF LGAS+YE    VPL   G E+  +R+G L
Sbjct:  370 MDIKVDNMLRAPNGVYKLGDLGTVVPMDGAMEIMEGDYRYLSRELLEG-NRSHLSAG-------------DIFALGASIYELARGVPLPSEGDEWQTIRDGDL 458          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|1208523356|gb|OWM78000.1| (hypothetical protein CDL15_Pgr018569 [Punica granatum])

HSP 1 Score: 78.9518 bits (193), Expect = 5.137e-14
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLV 126
            +DVKP NI++  +  +KLGD G A   D S+ + EGD RY+ +E+L   D++              L   DIF LGA++YE     PL  +GP+FL +REGRL+ LP +     S  F+  L+ +V
Sbjct:  364 LDVKPDNIYVK-NSVYKLGDFGCATPLDKSLPIEEGDARYMPLEILN--DVYDH------------LSKVDIFSLGAAIYELVRGSPLPDSGPQFLNLREGRLSLLPGH-----SLQFQNLLKMMV 469          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|971515756|dbj|GAQ82430.1| (Cyclin-dependent kinase WEE1 [Klebsormidium nitens])

HSP 1 Score: 78.5666 bits (192), Expect = 8.245e-14
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKG---LDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLPSNGEKSVSEGFERFLRNLV 126
            +D+KP NI+++ DGS+KLGD G A++AD S+ V EGD RY+  E+L      DL K+                D+F LGA+LYE     PL  AG E+  +R G L  +P      VS  F   +R+L+
Sbjct:  531 LDLKPDNIYVS-DGSYKLGDFGRAVRAD-SVGVEEGDSRYMPQEILNSASKCDLTKV----------------DLFSLGATLYELARAEPLPKAGSEYHQIRHGDLAPMP-----LVSPHFTDLVRSLL 636          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|1026765226|gb|OAE25960.1| (hypothetical protein AXG93_1712s1390 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 78.1814 bits (191), Expect = 1.002e-13
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLP 107
            +DVKP NI+   +G+FKLGD G A + DG++ + EGD RY S E+L   D +            + L   DIF LGA++YE    +PL  +G +F A+R+G+L  LP
Sbjct:  349 LDVKPDNIYFG-NGAFKLGDFGRATRLDGTIQIEEGDSRYASSEILN--DDY------------SNLHKADIFALGATMYELSRGLPLPSSGVQFQALRQGKLALLP 440          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|1179531244|ref|XP_020686733.1| (wee1-like protein kinase [Dendrobium catenatum])

HSP 1 Score: 78.1814 bits (191), Expect = 1.010e-13
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRLTHLP 107
            MDVKP NI++  +G +KLGD G AI  D S+ + EGD RY+  E+LK  D ++             L+  DIF LGA++YE     PL  +GP F  +REG++  LP
Sbjct:  353 MDVKPENIYVK-NGVYKLGDFGCAILTDKSLPIEEGDSRYMPQEILK--DKYEH------------LDKVDIFSLGAAIYELVKGSPLPESGPLFCNLREGKIPLLP 444          
BLAST of EWM25514.1 vs. NCBI_GenBank
Match: gi|1173935051|gb|OQR86237.1| (protein kinase [Achlya hypogyna])

HSP 1 Score: 78.1814 bits (191), Expect = 1.309e-13
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 0
Query:    1 MDVKPGNIFIAADGSFKLGDLGHAIKADGSMHVLEGDERYLSMEVLKGLDLFKLSAGKEVPPYRTILEPNDIFGLGASLYEAWSRVPLAGAGPEFLAVREGRL 103
            MD+K  N+  A +G +KLGDLG  +  DGSM ++EGD RYLS E+L+G               R+ L   DIF LGAS+YE    V L   G E+  +R+G L
Sbjct:  644 MDIKVENMLRATNGVYKLGDLGTVVPMDGSMEIMEGDYRYLSRELLEG--------------NRSHLSAGDIFALGASIYELARGVNLPSEGDEWQKIRDGDL 732          
The following BLAST results are available for this feature:
BLAST of EWM25514.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107280|gb|EWM25514.1|2.598e-126100.00protein kinase wee1 [Nannochloropsis gaditana][more]
gi|168046767|ref|XP_001775844.1|5.631e-1635.04predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|669147110|ref|XP_008609117.1|1.477e-1543.69WEE/WEE1 protein kinase [Saprolegnia diclina VS20]... [more]
gi|1091522339|ref|XP_018722491.1|1.266e-1437.12PREDICTED: wee1-like protein kinase [Eucalyptus gr... [more]
gi|813163899|ref|XP_012203010.1|5.110e-1444.66WEE protein kinase [Saprolegnia parasitica CBS 223... [more]
gi|1208523356|gb|OWM78000.1|5.137e-1438.10hypothetical protein CDL15_Pgr018569 [Punica grana... [more]
gi|971515756|dbj|GAQ82430.1|8.245e-1438.76Cyclin-dependent kinase WEE1 [Klebsormidium nitens... [more]
gi|1026765226|gb|OAE25960.1|1.002e-1341.12hypothetical protein AXG93_1712s1390 [Marchantia p... [more]
gi|1179531244|ref|XP_020686733.1|1.010e-1342.06wee1-like protein kinase [Dendrobium catenatum][more]
gi|1173935051|gb|OQR86237.1|1.309e-1342.72protein kinase [Achlya hypogyna][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5154rna5154Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications