EWM25519.1, cds5140 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|585107285|gb|EWM25519.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 365.54 bits (937), Expect = 6.161e-128 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MFGFKNKAAKEAAVVVSSPSVWGHCDNLAPPLVATPLRAILWCLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAGL 178 MFGFKNKAAKEAAVVVSSPSVWGHCDNLAPPLVATPLRAILWCLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAGL Sbjct: 1 MFGFKNKAAKEAAVVVSSPSVWGHCDNLAPPLVATPLRAILWCLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAGL 178
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|1027026790|ref|XP_016604153.1| (hypothetical protein SPPG_08502 [Spizellomyces punctatus DAOM BR117] >gi|907089622|gb|KNC96113.1| hypothetical protein SPPG_08502 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 71.633 bits (174), Expect = 9.049e-13 Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 0 Query: 43 CLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170 + L ++PH+++ ++ K G YN++ PR+ Q + ++ M +R AAH N E F F+ A + + L ++ +FL RF Y +YI + + V LRSL+W + V+ + L L Sbjct: 14 AIVLAYVPHVVKGAIITKSLGKYNNVNPRS-QLEKVQSRMTKASYEMAKRADAAHHNGLEIFPIFAGAVLAGNFAGLPNSTLNKYSAVFLTARFFYNFVYIKNSNSIVAGLRSLIWMVSIVSCFGLYL 140
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|655259722|ref|WP_028670215.1| (MAPEG family protein [Saccharospirillum impatiens]) HSP 1 Score: 65.4698 bits (158), Expect = 1.553e-10 Identity = 46/134 (34.33%), Postives = 65/134 (48.51%), Query Frame = 0 Query: 41 LWCLALTFLPHILR----IPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170 LWCL + L I+ + ++ +KG Y++ PR Q N L R AAH N+ EAF F+ IVA V +AS L F+ R YI LY+G V +LRS+VW ++A+ L+L Sbjct: 5 LWCLFIAALLVIMSKWPAMKVMAAMKGGYDNNHPRAQQAN---------LTGAGARGIAAHQNTIEAFPMFAAGVIVAEVFAAGSMVASLLAMAFIVSRVVYIGLYVGN----VASLRSIVWAVGYLASLGLLL 125
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|496273584|ref|WP_008985622.1| (MULTISPECIES: membrane protein [Alishewanella] >gi|392604802|gb|EIW87701.1| hypothetical protein AGRI_14310 [Alishewanella agri BL06] >gi|950111199|gb|KRS20785.1| membrane protein [Alishewanella sp. WH16-1]) HSP 1 Score: 64.3142 bits (155), Expect = 3.643e-10 Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 44 LALTFLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWV--GTLRSLVWFAAFVAAWRLILLSLS 174 L + FLP++ ++P+V ++ G YN+ PR QQ +L QR TAAH NS+EA +FSVA ++ + + L F+ R Y+ Y W+ T RSL+W A+ +A L+LL+L Sbjct: 9 LIIAFLPYLAKLPLVWAMQRAGGYNNHYPR---------QQQSQLTGFGQRCTAAHYNSFEALAFFSVAVLMVIAVGQVSDTMQLLAWSFVACRVAYLFCY------WLDWATARSLIWLASMASAISLMLLALG 128
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|552908946|gb|ERZ95032.1| (hypothetical protein GLOINDRAFT_341456 [Rhizophagus irregularis DAOM 181602] >gi|595453819|gb|EXX60408.1| hypothetical protein RirG_180120 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 63.1586 bits (152), Expect = 1.683e-9 Identity = 39/132 (29.55%), Postives = 64/132 (48.48%), Query Frame = 0 Query: 46 LTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAG 177 + + P+ + +V K G +N++ PR N+ + Q E R +R AAH N E F F+ A I A+V + + L T ++ R Y +YI A V RSLVW A+ ++ L +L+ ++ Sbjct: 16 VAYYPYFYKSFLVTKQTGNWNNINPR-ENVNKAERQMTQEAWRKAKRCEAAHQNGLETFPIFATAVIAANVTGVPTLYLNALSTSYVVSRIIYNSIYINNESAKVANFRSLVWAASMGISFSLYILAAKRSS 146
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|495884411|ref|WP_008608990.1| (MULTISPECIES: membrane protein [Alishewanella] >gi|374570495|gb|EHR41630.1| hypothetical protein AJE_05616 [Alishewanella jeotgali KCTC 22429] >gi|396087438|gb|EJI85038.1| hypothetical protein AEST_21400 [Alishewanella aestuarii B11]) HSP 1 Score: 62.3882 bits (150), Expect = 2.004e-9 Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 0 Query: 46 LTFLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWV--GTLRSLVWFAAFVAAWRLILLSLSQ 175 + LP++ ++P+V + G Y++ PR QQ +L QR TAAH NS+EA +FSVA ++ + + L F+G R Y+L Y W+ TLRSL+W A+ +A L+LL+L++ Sbjct: 11 IAILPYLAKLPLVWAMHRAGGYDNHYPR---------QQQSQLSGFGQRCTAAHYNSFEALAFFSVAVLMVLAVGQVTPLMQLLAWSFVGCRVGYLLCY------WLNWATLRSLIWLASMASAISLMLLALAR 129
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|495220372|ref|WP_007945147.1| (membrane protein [Pseudomonas sp. GM21] >gi|398131371|gb|EJM20689.1| putative membrane protein [Pseudomonas sp. GM21]) HSP 1 Score: 62.003 bits (149), Expect = 3.934e-9 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 0 Query: 42 WCLALT-FLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170 WC+ ++ L ++ R+P+ +K +G YN+ +PR QQ +L R AAH N +EAF F+V ++AH + + L +F+ R Y+L Y G AW RSLVWF FV + LI+ Sbjct: 6 WCVLISALLIYVARMPVAKAMKEQGGYNNHLPR---------QQQGQLTGFGARALAAHQNCFEAFILFAVGVLMAHTTQTAGWLIDLLAIIFVISRIIYLLCYWGDL-AWQ---RSLVWFVGFVCSLLLII 124
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|1052243123|ref|WP_065955711.1| (hypothetical protein [Alishewanella sp. HH-ZS] >gi|1051604805|gb|OCW96849.1| hypothetical protein A9165_09615 [Alishewanella sp. HH-ZS]) HSP 1 Score: 61.2326 bits (147), Expect = 6.362e-9 Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 46 LTFLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWV--GTLRSLVWFAAFVAAWRLILLSLSQ 175 + LP++ ++P+V + G Y++ PR QQ +L QR TAAH NS+EA +FSVA ++ + + L F+G R Y+ Y W+ TLRSL+W A+ +A L+LL+L++ Sbjct: 11 IAILPYLAKLPLVWAMHRAGGYDNHYPR---------QQQSQLSGFGQRCTAAHYNSFEALAFFSVAVLMVLAVGQVTPLMQLLAWSFVGCRVGYLFCY------WLNWATLRSLIWLASMASAISLMLLALAR 129
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|802114404|ref|WP_046032894.1| (MULTISPECIES: membrane protein [Pseudomonas] >gi|799188848|gb|KJZ33925.1| membrane protein [Pseudomonas fluorescens] >gi|1147646432|gb|OOG11692.1| hypothetical protein BMS17_06210 [Pseudomonas sp. C9]) HSP 1 Score: 60.4622 bits (145), Expect = 1.412e-8 Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 0 Query: 41 LWCLALT-FLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170 WC+ ++ L ++ R+P+ +K +G YN+ PR QQ +L R AAH N +EAF F+V ++AH + + L +F+ R Y+L Y G AW RSLVWF FV + L++ Sbjct: 5 FWCVFISALLIYVARMPVAKAMKEQGGYNNHSPR---------QQQAQLTGFGARAVAAHQNCFEAFILFAVGVLMAHTTQTAGWLIDVLAIIFVITRVIYLLCYWGDL-AW---QRSLVWFVGFVCSLLLMI 124
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|748192561|ref|WP_039763661.1| (membrane protein [Pseudomonas fluorescens] >gi|747109472|gb|KIF56082.1| membrane protein [Pseudomonas fluorescens]) HSP 1 Score: 60.077 bits (144), Expect = 1.873e-8 Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 0 Query: 42 WCLALT-FLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170 WC+ ++ L ++ R+P+ +K +G Y++ +PR QQ +L R AAH NS EAF F++ ++AH + + L +FL R CY+ Y+ + LRSL+W FV + L++ Sbjct: 6 WCVFISALLIYVARMPVAKAMKEQGGYDNHLPR---------QQQAQLTGFGARALAAHQNSIEAFILFAIGVLMAHTTQTAGWLIDALAIIFLISRICYLWFYLAD----LPKLRSLMWLVGFVCSLLLMI 124 The following BLAST results are available for this feature:
BLAST of EWM25519.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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