EWM25519.1, cds5140 (CDS) Nannochloropsis gaditana

Overview
NameEWM25519.1
Unique Namecds5140
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:272924..273460 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25519.1
ProductMembrane associated eicosanoid/glutathione metabolism-like domain protein
Orig transcript idgnl|cribi|Naga_100032g2.262.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:272924..273460 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001129Membr-assoc_MAPEG
IPR023352MAPEG-like_dom
Homology
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|585107285|gb|EWM25519.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 365.54 bits (937), Expect = 6.161e-128
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 MFGFKNKAAKEAAVVVSSPSVWGHCDNLAPPLVATPLRAILWCLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAGL 178
            MFGFKNKAAKEAAVVVSSPSVWGHCDNLAPPLVATPLRAILWCLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAGL
Sbjct:    1 MFGFKNKAAKEAAVVVSSPSVWGHCDNLAPPLVATPLRAILWCLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAGL 178          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|1027026790|ref|XP_016604153.1| (hypothetical protein SPPG_08502 [Spizellomyces punctatus DAOM BR117] >gi|907089622|gb|KNC96113.1| hypothetical protein SPPG_08502 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 71.633 bits (174), Expect = 9.049e-13
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 0
Query:   43 CLALTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170
             + L ++PH+++  ++ K  G YN++ PR+ Q  +  ++       M +R  AAH N  E F  F+ A +  +   L     ++   +FL  RF Y  +YI  + + V  LRSL+W  + V+ + L L
Sbjct:   14 AIVLAYVPHVVKGAIITKSLGKYNNVNPRS-QLEKVQSRMTKASYEMAKRADAAHHNGLEIFPIFAGAVLAGNFAGLPNSTLNKYSAVFLTARFFYNFVYIKNSNSIVAGLRSLIWMVSIVSCFGLYL 140          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|655259722|ref|WP_028670215.1| (MAPEG family protein [Saccharospirillum impatiens])

HSP 1 Score: 65.4698 bits (158), Expect = 1.553e-10
Identity = 46/134 (34.33%), Postives = 65/134 (48.51%), Query Frame = 0
Query:   41 LWCLALTFLPHILR----IPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170
            LWCL +  L  I+     + ++  +KG Y++  PR  Q N         L     R  AAH N+ EAF  F+   IVA V      +AS L   F+  R  YI LY+G     V +LRS+VW   ++A+  L+L
Sbjct:    5 LWCLFIAALLVIMSKWPAMKVMAAMKGGYDNNHPRAQQAN---------LTGAGARGIAAHQNTIEAFPMFAAGVIVAEVFAAGSMVASLLAMAFIVSRVVYIGLYVGN----VASLRSIVWAVGYLASLGLLL 125          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|496273584|ref|WP_008985622.1| (MULTISPECIES: membrane protein [Alishewanella] >gi|392604802|gb|EIW87701.1| hypothetical protein AGRI_14310 [Alishewanella agri BL06] >gi|950111199|gb|KRS20785.1| membrane protein [Alishewanella sp. WH16-1])

HSP 1 Score: 64.3142 bits (155), Expect = 3.643e-10
Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = 0
Query:   44 LALTFLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWV--GTLRSLVWFAAFVAAWRLILLSLS 174
            L + FLP++ ++P+V  ++  G YN+  PR         QQ  +L    QR TAAH NS+EA  +FSVA ++   +    +    L   F+  R  Y+  Y      W+   T RSL+W A+  +A  L+LL+L 
Sbjct:    9 LIIAFLPYLAKLPLVWAMQRAGGYNNHYPR---------QQQSQLTGFGQRCTAAHYNSFEALAFFSVAVLMVIAVGQVSDTMQLLAWSFVACRVAYLFCY------WLDWATARSLIWLASMASAISLMLLALG 128          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|552908946|gb|ERZ95032.1| (hypothetical protein GLOINDRAFT_341456 [Rhizophagus irregularis DAOM 181602] >gi|595453819|gb|EXX60408.1| hypothetical protein RirG_180120 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 63.1586 bits (152), Expect = 1.683e-9
Identity = 39/132 (29.55%), Postives = 64/132 (48.48%), Query Frame = 0
Query:   46 LTFLPHILRIPMVLKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLILLSLSQAG 177
            + + P+  +  +V K  G +N++ PR    N+ + Q   E  R  +R  AAH N  E F  F+ A I A+V  +     + L T ++  R  Y  +YI    A V   RSLVW A+   ++ L +L+  ++ 
Sbjct:   16 VAYYPYFYKSFLVTKQTGNWNNINPR-ENVNKAERQMTQEAWRKAKRCEAAHQNGLETFPIFATAVIAANVTGVPTLYLNALSTSYVVSRIIYNSIYINNESAKVANFRSLVWAASMGISFSLYILAAKRSS 146          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|495884411|ref|WP_008608990.1| (MULTISPECIES: membrane protein [Alishewanella] >gi|374570495|gb|EHR41630.1| hypothetical protein AJE_05616 [Alishewanella jeotgali KCTC 22429] >gi|396087438|gb|EJI85038.1| hypothetical protein AEST_21400 [Alishewanella aestuarii B11])

HSP 1 Score: 62.3882 bits (150), Expect = 2.004e-9
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   46 LTFLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWV--GTLRSLVWFAAFVAAWRLILLSLSQ 175
            +  LP++ ++P+V  +   G Y++  PR         QQ  +L    QR TAAH NS+EA  +FSVA ++   +     +   L   F+G R  Y+L Y      W+   TLRSL+W A+  +A  L+LL+L++
Sbjct:   11 IAILPYLAKLPLVWAMHRAGGYDNHYPR---------QQQSQLSGFGQRCTAAHYNSFEALAFFSVAVLMVLAVGQVTPLMQLLAWSFVGCRVGYLLCY------WLNWATLRSLIWLASMASAISLMLLALAR 129          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|495220372|ref|WP_007945147.1| (membrane protein [Pseudomonas sp. GM21] >gi|398131371|gb|EJM20689.1| putative membrane protein [Pseudomonas sp. GM21])

HSP 1 Score: 62.003 bits (149), Expect = 3.934e-9
Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 0
Query:   42 WCLALT-FLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170
            WC+ ++  L ++ R+P+   +K +G YN+ +PR         QQ  +L     R  AAH N +EAF  F+V  ++AH  +    +   L  +F+  R  Y+L Y G   AW    RSLVWF  FV +  LI+
Sbjct:    6 WCVLISALLIYVARMPVAKAMKEQGGYNNHLPR---------QQQGQLTGFGARALAAHQNCFEAFILFAVGVLMAHTTQTAGWLIDLLAIIFVISRIIYLLCYWGDL-AWQ---RSLVWFVGFVCSLLLII 124          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|1052243123|ref|WP_065955711.1| (hypothetical protein [Alishewanella sp. HH-ZS] >gi|1051604805|gb|OCW96849.1| hypothetical protein A9165_09615 [Alishewanella sp. HH-ZS])

HSP 1 Score: 61.2326 bits (147), Expect = 6.362e-9
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   46 LTFLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWV--GTLRSLVWFAAFVAAWRLILLSLSQ 175
            +  LP++ ++P+V  +   G Y++  PR         QQ  +L    QR TAAH NS+EA  +FSVA ++   +     +   L   F+G R  Y+  Y      W+   TLRSL+W A+  +A  L+LL+L++
Sbjct:   11 IAILPYLAKLPLVWAMHRAGGYDNHYPR---------QQQSQLSGFGQRCTAAHYNSFEALAFFSVAVLMVLAVGQVTPLMQLLAWSFVGCRVGYLFCY------WLNWATLRSLIWLASMASAISLMLLALAR 129          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|802114404|ref|WP_046032894.1| (MULTISPECIES: membrane protein [Pseudomonas] >gi|799188848|gb|KJZ33925.1| membrane protein [Pseudomonas fluorescens] >gi|1147646432|gb|OOG11692.1| hypothetical protein BMS17_06210 [Pseudomonas sp. C9])

HSP 1 Score: 60.4622 bits (145), Expect = 1.412e-8
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 0
Query:   41 LWCLALT-FLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170
             WC+ ++  L ++ R+P+   +K +G YN+  PR         QQ  +L     R  AAH N +EAF  F+V  ++AH  +    +   L  +F+  R  Y+L Y G   AW    RSLVWF  FV +  L++
Sbjct:    5 FWCVFISALLIYVARMPVAKAMKEQGGYNNHSPR---------QQQAQLTGFGARAVAAHQNCFEAFILFAVGVLMAHTTQTAGWLIDVLAIIFVITRVIYLLCYWGDL-AW---QRSLVWFVGFVCSLLLMI 124          
BLAST of EWM25519.1 vs. NCBI_GenBank
Match: gi|748192561|ref|WP_039763661.1| (membrane protein [Pseudomonas fluorescens] >gi|747109472|gb|KIF56082.1| membrane protein [Pseudomonas fluorescens])

HSP 1 Score: 60.077 bits (144), Expect = 1.873e-8
Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 0
Query:   42 WCLALT-FLPHILRIPMV--LKLKGWYNHLMPRTHQFNERDTQQNPELVRMIQRTTAAHANSWEAFTYFSVACIVAHVLKLKEEIASRLCTLFLGLRFCYILLYIGGTQAWVGTLRSLVWFAAFVAAWRLIL 170
            WC+ ++  L ++ R+P+   +K +G Y++ +PR         QQ  +L     R  AAH NS EAF  F++  ++AH  +    +   L  +FL  R CY+  Y+      +  LRSL+W   FV +  L++
Sbjct:    6 WCVFISALLIYVARMPVAKAMKEQGGYDNHLPR---------QQQAQLTGFGARALAAHQNSIEAFILFAIGVLMAHTTQTAGWLIDALAIIFLISRICYLWFYLAD----LPKLRSLMWLVGFVCSLLLMI 124          
The following BLAST results are available for this feature:
BLAST of EWM25519.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107285|gb|EWM25519.1|6.161e-128100.00Membrane associated eicosanoid/glutathione metabol... [more]
gi|1027026790|ref|XP_016604153.1|9.049e-1328.91hypothetical protein SPPG_08502 [Spizellomyces pun... [more]
gi|655259722|ref|WP_028670215.1|1.553e-1034.33MAPEG family protein [Saccharospirillum impatiens][more]
gi|496273584|ref|WP_008985622.1|3.643e-1033.33MULTISPECIES: membrane protein [Alishewanella] >gi... [more]
gi|552908946|gb|ERZ95032.1|1.683e-929.55hypothetical protein GLOINDRAFT_341456 [Rhizophagu... [more]
gi|495884411|ref|WP_008608990.1|2.004e-933.58MULTISPECIES: membrane protein [Alishewanella] >gi... [more]
gi|495220372|ref|WP_007945147.1|3.934e-934.09membrane protein [Pseudomonas sp. GM21] >gi|398131... [more]
gi|1052243123|ref|WP_065955711.1|6.362e-932.84hypothetical protein [Alishewanella sp. HH-ZS] >gi... [more]
gi|802114404|ref|WP_046032894.1|1.412e-833.08MULTISPECIES: membrane protein [Pseudomonas] >gi|7... [more]
gi|748192561|ref|WP_039763661.1|1.873e-830.30membrane protein [Pseudomonas fluorescens] >gi|747... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5152rna5152Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications