EWM25544.1, cds5129 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|585107315|gb|EWM25544.1| (zinc finger ran-binding domain-containing protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 1141.33 bits (2951), Expect = 0.000e+0 Identity = 565/565 (100.00%), Postives = 565/565 (100.00%), Query Frame = 0 Query: 1 MSRGRGTRQPTQRPPPQEEGGWNGGRRAGVSGSREGKKGEGRKREAPTGFGERAPRASVRFPRSRGGFREDGSEESAWERLKARVGITDDRRGGEEGGAEGGRRGIGMSFAVSANTERVRVAYGPAGGEDGRRGAGAVNFSMEEFYALVDGQRLELVNTPFEGLGPFLELDGSEPAAATSPFSLCLQVLLGCEAFVQQWADLRGWERKLLAEAEHLHLPLAQSLRKEIGKIWWKGEGAVEGGTEGQGGERGEERRKPCFERYVKYPALENGPSGTKVIPPYVPHAFAPRANVPTHAGWPPAPTEKCPVPTNAEASTCTSASSGMEKDSVRTAGKGMGGIHISPHGAISPPGSTPASSIPLLCSFCKRPISDPSLLRDHTLRLSMAHHSQSFASVTTAGGRDRVDRIGSGPRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTCLDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFARNAEGKKACGRL 565 MSRGRGTRQPTQRPPPQEEGGWNGGRRAGVSGSREGKKGEGRKREAPTGFGERAPRASVRFPRSRGGFREDGSEESAWERLKARVGITDDRRGGEEGGAEGGRRGIGMSFAVSANTERVRVAYGPAGGEDGRRGAGAVNFSMEEFYALVDGQRLELVNTPFEGLGPFLELDGSEPAAATSPFSLCLQVLLGCEAFVQQWADLRGWERKLLAEAEHLHLPLAQSLRKEIGKIWWKGEGAVEGGTEGQGGERGEERRKPCFERYVKYPALENGPSGTKVIPPYVPHAFAPRANVPTHAGWPPAPTEKCPVPTNAEASTCTSASSGMEKDSVRTAGKGMGGIHISPHGAISPPGSTPASSIPLLCSFCKRPISDPSLLRDHTLRLSMAHHSQSFASVTTAGGRDRVDRIGSGPRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTCLDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFARNAEGKKACGRL Sbjct: 1 MSRGRGTRQPTQRPPPQEEGGWNGGRRAGVSGSREGKKGEGRKREAPTGFGERAPRASVRFPRSRGGFREDGSEESAWERLKARVGITDDRRGGEEGGAEGGRRGIGMSFAVSANTERVRVAYGPAGGEDGRRGAGAVNFSMEEFYALVDGQRLELVNTPFEGLGPFLELDGSEPAAATSPFSLCLQVLLGCEAFVQQWADLRGWERKLLAEAEHLHLPLAQSLRKEIGKIWWKGEGAVEGGTEGQGGERGEERRKPCFERYVKYPALENGPSGTKVIPPYVPHAFAPRANVPTHAGWPPAPTEKCPVPTNAEASTCTSASSGMEKDSVRTAGKGMGGIHISPHGAISPPGSTPASSIPLLCSFCKRPISDPSLLRDHTLRLSMAHHSQSFASVTTAGGRDRVDRIGSGPRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTCLDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFARNAEGKKACGRL 565
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|397642908|gb|EJK75533.1| (hypothetical protein THAOC_02744 [Thalassiosira oceanica]) HSP 1 Score: 133.265 bits (334), Expect = 5.124e-29 Identity = 78/172 (45.35%), Postives = 99/172 (57.56%), Query Frame = 0 Query: 414 YCSYACGQEILLRAG---SSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFM----------------------RLEHAFTCLDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFARNAEGKK 560 YCS+ C +E ++ G SSS IR Q+FALERGVCQLCG D +ALFQ++K+L PPER+ + R E +FTC ++T R +Q DH + V EGGG GL+NLRTLCTPCHA ET +L RL+ NQ + G DI + N EGKK Sbjct: 803 YCSFECAEEGRVKRGGLYSSSKIREQVFALERGVCQLCGVDSYALFQRIKALEPPERLNALLKAKWKLPQGKRSVDRLLQMPEGRFEISFTC-KYFSLTLLRISRIFQADHEVAVAEGGGGTGLDNLRTLCTPCHAAETEKLLSRLKTS-NQ--SNGQMDIFAALSNLEGKK 970
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|923126757|ref|XP_013756845.1| (zinc finger Ran-binding domain-containing protein 3 [Thecamonas trahens ATCC 50062] >gi|906557055|gb|KNC50298.1| zinc finger Ran-binding domain-containing protein 3 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 129.028 bits (323), Expect = 1.221e-27 Identity = 65/143 (45.45%), Postives = 85/143 (59.44%), Query Frame = 0 Query: 410 PRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMR--LEHAFTCLDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIR 550 P +CS C +E+ +RA SS+ +R+QLF LE GVC CG D H ++ K L P +R + + + + +P G FWQ DH++PVVEGGG C L N RTLCTPCHA ET+ LR RLR + A+ GT DIR Sbjct: 864 PDAAFCSTKCQREMQVRA-SSTAVRQQLFELEHGVCVKCGVDAHKVYAATKVLHPHDRAAHIQASPFANCSLAMRQRMVNEPSPGLFWQADHIVPVVEGGGQCSLFNYRTLCTPCHAAETSVLRDRLRRAQMAVASAGTADIR 1005
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|1191036499|ref|XP_020895461.1| (DNA annealing helicase and endonuclease ZRANB3-like [Exaiptasia pallida]) HSP 1 Score: 123.25 bits (308), Expect = 7.853e-26 Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 0 Query: 406 IGSGPRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTC-----LDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFAR 554 +G+ +CS+ C + +R S + RRQLF E+G+CQLC D HA F VK+L +R LE++ I DP+EG FW+ DH++ V EGGG CG+ENLRTLC PCH + T L +RL+ + G+R+I F + Sbjct: 637 LGNNWDSRFCSFDCKESYQMRI-SGTATRRQLFDAEQGICQLCHFDAHAFFTSVKALQKKDRRTF---LENSIYADLPPRFLNRMILDPKEGMFWEADHIVAVAEGGGECGIENLRTLCVPCHKKVTKDLLIRLKNKKRAVDTTGSRNITGFFK 786
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|999988660|gb|KXJ27740.1| (DNA annealing helicase and endonuclease ZRANB3 [Exaiptasia pallida]) HSP 1 Score: 123.635 bits (309), Expect = 9.502e-26 Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 0 Query: 406 IGSGPRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTC-----LDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFAR 554 +G+ +CS+ C + +R S + RRQLF E+G+CQLC D HA F VK+L +R LE++ I DP+EG FW+ DH++ V EGGG CG+ENLRTLC PCH + T L +RL+ + G+R+I F + Sbjct: 1298 LGNNWDSRFCSFDCKESYQMRI-SGTATRRQLFDAEQGICQLCHFDAHAFFTSVKALQKKDRRTF---LENSIYADLPPRFLNRMILDPKEGMFWEADHIVAVAEGGGECGIENLRTLCVPCHKKVTKDLLIRLKNKKRAVDTTGSRNITGFFK 1447
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|551612826|ref|XP_005787425.1| (hypothetical protein EMIHUDRAFT_228034 [Emiliania huxleyi CCMP1516] >gi|485640802|gb|EOD34996.1| hypothetical protein EMIHUDRAFT_228034 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 0 Query: 410 PRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPP-PERVQLFMRLEHAFTCLDKAA--ITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSF 552 P P+CS C + + RRQ++ +RGVC CG D H L++Q+ +L PER+Q R H T D+ + DP+EG FW+ DH+LPV EGGG L NL+TLC PCHA +T R +E + Q AAKGT D+RSF Sbjct: 133 PDSPFCSEGCAASYAAASSQGA-GRRQVYDRDRGVCAACGFDAHRLYRQIAALATGPERMQALQRT-HYPTKGDRIGRLLRDPKEGDFWEADHILPVEEGGGESDLSNLQTLCVPCHADKTRRQAQSSKERKRQAAAKGTADLRSF 276
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|828209141|ref|XP_012557862.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like [Hydra vulgaris]) HSP 1 Score: 122.094 bits (305), Expect = 2.666e-25 Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 0 Query: 402 RVDRIGSGP-RQPYCSYACGQEILLRAGSS-SLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTCLDKAA-------ITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGR 538 +V++I +G +CS+ C QE +R+ S R QLFA+E GVCQ+CG D H +F ++ ++P R + TC K + I P+EG FWQ DHVL V EGGG CGLEN RTLCTPCH T L +R+++ + Sbjct: 1326 QVEQIAAGSWLARFCSHTCMQEFKIRSKSKHENAREQLFAVELGVCQMCGTDAHTVFLEISNMPIANRKAALEK-----TCFVKLSVPVLNKMIKHPKEGLFWQADHVLAVAEGGGECGLENYRTLCTPCHKVVTKDLMIRIKKVK 1466
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|1126219542|ref|XP_019643922.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like [Branchiostoma belcheri]) HSP 1 Score: 119.013 bits (297), Expect = 2.523e-24 Identity = 71/199 (35.68%), Postives = 97/199 (48.74%), Query Frame = 0 Query: 361 LCSFCKRPISDPSLLRDHTLRLSMAHHSQSFASVTTAGGRDRVDRIGSGPRQPYCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMR---LEHAFTCLDKAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQE--AAKGTRDIRSFAR 554 LC +C++P+S QS + T G V P + YCS C +E +R S R+QL E GVCQ+CG + +FQQVK LP ER ++F++ L I DP+EG FW DH++PV +GGG C L+N RTLC CH + TT+ R + QE + G R I F + Sbjct: 1285 LCLWCQKPVS----------------QQQSSLAADTEGASSHV-----RPSR-YCSTECKEEYRIRMKGSHHSRQQLRDTEFGVCQICGTNMRQIFQQVKDLPMSER-KVFLKTTPLSSLPAAQLNKIIADPKEGQFWHADHIVPVADGGGLCSLDNFRTLCVACHRKVTTQQNRERRSAQKQERRSQDGYRSIMDFIK 1460
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|1211421982|ref|XP_021497101.1| (DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Meriones unguiculatus] >gi|1211421984|ref|XP_021497102.1| DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Meriones unguiculatus]) HSP 1 Score: 116.701 bits (291), Expect = 9.483e-24 Identity = 65/142 (45.77%), Postives = 81/142 (57.04%), Query Frame = 0 Query: 414 YCSYACGQEILLRAGSSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTCLDKA--AITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTR-LRMRLREGRNQEAAKGTRDIRSF 552 +CS C E +R+ +S L R Q+FA E GVCQLCG D LF QV+ P +R L A L++ + +P EGHFWQVDH+ PV EGGG C L+NL+TLCT CH T R + R R + AAK DI F Sbjct: 589 FCSLKCQDEFWIRSNNSYL-RAQVFAAEHGVCQLCGVDAQELFLQVRDAPKSQRKSLLDAAWAAKLPLEQLNDMLRNPGEGHFWQVDHIKPVYEGGGQCSLDNLQTLCTVCHKERTARQAKERSRVRQRSLAAKHGSDITRF 729
BLAST of EWM25544.1 vs. NCBI_GenBank
Match: gi|1176117810|ref|XP_020630085.1| (DNA annealing helicase and endonuclease ZRANB3-like, partial [Orbicella faveolata]) HSP 1 Score: 107.457 bits (267), Expect = 9.810e-24 Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 0 Query: 429 SSSLIRRQLFALERGVCQLCGCDCHALFQQVKSLPPPERVQLFMRLEHAFTCLD----KAAITDPREGHFWQVDHVLPVVEGGGACGLENLRTLCTPCHARETTRLRMRLREGRNQEAAKGTRDIRSFAR 554 S + +RR LF ERG+CQLC D H+L+Q V L R R ++ L K + +P+EG FW+ DH+ PV EGGG CGL+N RTLC CH + T L RL++ + + + G DI +F R Sbjct: 26 SGTAVRRALFESERGICQLCFLDAHSLYQSVTVLSVRNRPAFLART--PYSALPQRTLKKMVMEPKEGMFWEADHITPVSEGGGECGLDNYRTLCVMCHRKATEELNRRLKQQKVLQYSAGYADISTFFR 153 The following BLAST results are available for this feature:
BLAST of EWM25544.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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