EWM25546.1, cds5123 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|585107317|gb|EWM25546.1| (hypothetical protein Naga_100130g8 [Nannochloropsis gaditana]) HSP 1 Score: 2677.12 bits (6938), Expect = 0.000e+0 Identity = 1309/1309 (100.00%), Postives = 1309/1309 (100.00%), Query Frame = 0
Query: 1 MEQSRLQAYLQSACSVLGFSVGEIWCCNDTKDAASPLNLRFIQLYTSPEYDRYRSQLIEPPPDALEAPARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGKEVVLLLMFSPAVLELTEEAHRFLYTVAQAASDAVCGFLPASVASSLVTSAAWGPRSPLSDPTAPGENNMPHTRTLIEALPASVTFQMVEMASEMVGVNVPIKTEFLETFNSIYNPPPPPLMPVAGGDGQGEEKGLDLDAFDSLPPLEDCFLPTELLEDGVLMSGLRDEGMTGEDWDFGAALDFIFDKDQGGEELGVGTEGEWFGPGKGREGGEVLNGGMTEGGQPDRLSQHTEASQPSGMDDNQSNLKQEVGGLQGKGSDREQGEDSVIRFFYEDALQRLRFEEFVKGFLSMSVFHTAECWVARGKETLEQVYCATCLADVQSWVRFSSKLHGDTQRALPARVLVENQAIWERDAQRLNPSGAGGGGMENGGGAGKHVIQTAFGLPVHVDQSHRLVVIFYSTYSIEPAEIMESFVKRALDLLWNKDAQHAAALLAEQQQEQQQLLQLQHESSGGGSPSLGLSEASSSYSLGSELGEDMHTNWRTSNLDNTGNHDGRIQSGQQQMSPHGVGGLRSGQGSGQGQPQRQSSFSSMTKHSDMMGSSTSTYAFEGQQQQHHPQQQQQQQPVYVFGYTPQDSSSTSSSYPSSSTTSHPYHHHQAALSTTTPSSPFSGPSATSAFQRGSTTSSLPPGGGAAGPGFGTPPPLTYTSSTPILTTHGGIPVPAPRPAGGQGSAGSQQQSSQQQQPQPSRPGSQPSCGGGQGTDLGTVGGQGLTTLIHLPPGSSLPPLGGAINIGGTLYYPQHQVTGLQGAPYQQLPQHQQHPSSFGHGAHTGPGGGGSLHREDSGGTSNLDFSMDLPAGGNIAASMMPPPATRSPSFAQADHQAPQSIRFAQSGRQGEKGSVLSVRHDGGGSDKGTRGETVMHSGGRNVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSGYLKKRASEQQEGDEEGGGVFAATASSPSSVSVGGSSPSSLASFVDNPAKKRMIAVGKGGSNRATGIKGLYRGDAIAAYAAAFNSTSPSL 1309
MEQSRLQAYLQSACSVLGFSVGEIWCCNDTKDAASPLNLRFIQLYTSPEYDRYRSQLIEPPPDALEAPARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGKEVVLLLMFSPAVLELTEEAHRFLYTVAQAASDAVCGFLPASVASSLVTSAAWGPRSPLSDPTAPGENNMPHTRTLIEALPASVTFQMVEMASEMVGVNVPIKTEFLETFNSIYNPPPPPLMPVAGGDGQGEEKGLDLDAFDSLPPLEDCFLPTELLEDGVLMSGLRDEGMTGEDWDFGAALDFIFDKDQGGEELGVGTEGEWFGPGKGREGGEVLNGGMTEGGQPDRLSQHTEASQPSGMDDNQSNLKQEVGGLQGKGSDREQGEDSVIRFFYEDALQRLRFEEFVKGFLSMSVFHTAECWVARGKETLEQVYCATCLADVQSWVRFSSKLHGDTQRALPARVLVENQAIWERDAQRLNPSGAGGGGMENGGGAGKHVIQTAFGLPVHVDQSHRLVVIFYSTYSIEPAEIMESFVKRALDLLWNKDAQHAAALLAEQQQEQQQLLQLQHESSGGGSPSLGLSEASSSYSLGSELGEDMHTNWRTSNLDNTGNHDGRIQSGQQQMSPHGVGGLRSGQGSGQGQPQRQSSFSSMTKHSDMMGSSTSTYAFEGQQQQHHPQQQQQQQPVYVFGYTPQDSSSTSSSYPSSSTTSHPYHHHQAALSTTTPSSPFSGPSATSAFQRGSTTSSLPPGGGAAGPGFGTPPPLTYTSSTPILTTHGGIPVPAPRPAGGQGSAGSQQQSSQQQQPQPSRPGSQPSCGGGQGTDLGTVGGQGLTTLIHLPPGSSLPPLGGAINIGGTLYYPQHQVTGLQGAPYQQLPQHQQHPSSFGHGAHTGPGGGGSLHREDSGGTSNLDFSMDLPAGGNIAASMMPPPATRSPSFAQADHQAPQSIRFAQSGRQGEKGSVLSVRHDGGGSDKGTRGETVMHSGGRNVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSGYLKKRASEQQEGDEEGGGVFAATASSPSSVSVGGSSPSSLASFVDNPAKKRMIAVGKGGSNRATGIKGLYRGDAIAAYAAAFNSTSPSL
Sbjct: 1 MEQSRLQAYLQSACSVLGFSVGEIWCCNDTKDAASPLNLRFIQLYTSPEYDRYRSQLIEPPPDALEAPARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGKEVVLLLMFSPAVLELTEEAHRFLYTVAQAASDAVCGFLPASVASSLVTSAAWGPRSPLSDPTAPGENNMPHTRTLIEALPASVTFQMVEMASEMVGVNVPIKTEFLETFNSIYNPPPPPLMPVAGGDGQGEEKGLDLDAFDSLPPLEDCFLPTELLEDGVLMSGLRDEGMTGEDWDFGAALDFIFDKDQGGEELGVGTEGEWFGPGKGREGGEVLNGGMTEGGQPDRLSQHTEASQPSGMDDNQSNLKQEVGGLQGKGSDREQGEDSVIRFFYEDALQRLRFEEFVKGFLSMSVFHTAECWVARGKETLEQVYCATCLADVQSWVRFSSKLHGDTQRALPARVLVENQAIWERDAQRLNPSGAGGGGMENGGGAGKHVIQTAFGLPVHVDQSHRLVVIFYSTYSIEPAEIMESFVKRALDLLWNKDAQHAAALLAEQQQEQQQLLQLQHESSGGGSPSLGLSEASSSYSLGSELGEDMHTNWRTSNLDNTGNHDGRIQSGQQQMSPHGVGGLRSGQGSGQGQPQRQSSFSSMTKHSDMMGSSTSTYAFEGQQQQHHPQQQQQQQPVYVFGYTPQDSSSTSSSYPSSSTTSHPYHHHQAALSTTTPSSPFSGPSATSAFQRGSTTSSLPPGGGAAGPGFGTPPPLTYTSSTPILTTHGGIPVPAPRPAGGQGSAGSQQQSSQQQQPQPSRPGSQPSCGGGQGTDLGTVGGQGLTTLIHLPPGSSLPPLGGAINIGGTLYYPQHQVTGLQGAPYQQLPQHQQHPSSFGHGAHTGPGGGGSLHREDSGGTSNLDFSMDLPAGGNIAASMMPPPATRSPSFAQADHQAPQSIRFAQSGRQGEKGSVLSVRHDGGGSDKGTRGETVMHSGGRNVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSGYLKKRASEQQEGDEEGGGVFAATASSPSSVSVGGSSPSSLASFVDNPAKKRMIAVGKGGSNRATGIKGLYRGDAIAAYAAAFNSTSPSL 1309
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|1210520117|dbj|GAX21000.1| (hypothetical protein FisN_1Lh333 [Fistulifera solaris]) HSP 1 Score: 272.707 bits (696), Expect = 1.053e-72 Identity = 118/183 (64.48%), Postives = 144/183 (78.69%), Query Frame = 0
Query: 1048 KICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSGYLKKRASEQQ 1230
K+C+ + C + R P+C +H+G R C+H GC KCAQG+T++CIAHGGGRRCT+ GC KGARDK FCAAHGGGKRC DGCSKSAVGGS +CTAHGGGRRC + C +SAQSST FCV+HGGG+KC C KVARGRTSFCAAHGGG+RCK+ GCN+ A+GK Q+CR H G +++ +Q
Sbjct: 700 KMCRIQGCSEVAVPRRPHCMKHSGTRLCEHEGCSKCAQGSTRFCIAHGGGRRCTFQGCDKGARDKFFCAAHGGGKRCIHDGCSKSAVGGSKLCTAHGGGRRCSVEGCDKSAQSSTEFCVKHGGGKKCAQADCDKVARGRTSFCAAHGGGVRCKLEGCNRVAIGKRQLCRLHGGGASRKSESKQ 882 HSP 2 Score: 111.694 bits (278), Expect = 4.706e-21 Identity = 67/191 (35.08%), Postives = 108/191 (56.54%), Query Frame = 0
Query: 1 MEQSRLQAYLQSACSVLGFSVGEIWCCND---------TKDAASPL-------NLRFIQLYTSPEYDRYRSQLIEPPPDALEAPARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGK-EVVLLLMFSPAVLELTEEAHRFLYTVAQ-AASDAVCGFLPA 173
M+ R++AYLQ+AC+ LGF VGE+W + +D S L LRF+QLYTS ++ +R++LI PP + + K+ +VS H SP + A+ QVVWA+T ++GL R + L++AVG+PV + +++MFSP ++ TE++ FL +++Q AA+ ++ LPA
Sbjct: 1 MDPERVRAYLQAACAGLGFDVGEVWWTSSENGSSTVAAIEDQDSALARSQGRRQLRFVQLYTSKNFESHRAELINPPDHSW-------NDKNDSEAEVSEHVLSPRLVNAISSTAQVVWATTKKQEGLTGRSDVVLQTAVGMPVAVDANGNMCVVVMFSPNNIQSTEDSLDFLRSLSQSAATTSIPCLLPA 184 HSP 3 Score: 95.5153 bits (236), Expect = 4.136e-16 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 0
Query: 1046 GRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDK-NFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGG 1146
G K C + C + S C+ H G R C GC K AQ +T++C+ HGGG++C C K AR + +FCAAHGGG RC ++GC++ A+G +C HGGG
Sbjct: 772 GGKRCIHDGCSKSAVGGSKLCTAHGGGRRCSVEGCDKSAQSSTEFCVKHGGGKKCAQADCDKVARGRTSFCAAHGGGVRCKLEGCNRVAIGKRQLCRLHGGG 873
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|1210530567|dbj|GAX10792.1| (hypothetical protein FisN_1Hh333 [Fistulifera solaris]) HSP 1 Score: 269.24 bits (687), Expect = 1.547e-71 Identity = 117/183 (63.93%), Postives = 142/183 (77.60%), Query Frame = 0
Query: 1048 KICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSGYLKKRASEQQ 1230
K+C+ + C + R P+C +H+G R C+H GC KCAQG+T++CIAHGGGRRCT+ GC KGARDK FCAAHGGGKRC DGCSKSAVGGS CTAHGGGRRC + C +SAQSST FCV+HGGG+KC C KVARGRT+FCAAHGGG+RCK+ GCN+ A+GK Q+CR H G ++ +Q
Sbjct: 700 KMCRIQGCSEIAVPRRPHCMKHSGTRLCEHEGCSKCAQGSTRFCIAHGGGRRCTFQGCDKGARDKFFCAAHGGGKRCIHDGCSKSAVGGSKFCTAHGGGRRCSVEGCDKSAQSSTQFCVKHGGGKKCAQPDCDKVARGRTNFCAAHGGGVRCKLEGCNRVAIGKRQLCRLHGGGASRKNESKQ 882 HSP 2 Score: 112.849 bits (281), Expect = 2.054e-21 Identity = 68/191 (35.60%), Postives = 108/191 (56.54%), Query Frame = 0
Query: 1 MEQSRLQAYLQSACSVLGFSVGEIWCCND---------TKDAASPL-------NLRFIQLYTSPEYDRYRSQLIEPPPDALEAPARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGK-EVVLLLMFSPAVLELTEEAHRFLYTVAQ-AASDAVCGFLPA 173
M+ R++AYLQ+AC+ LGF VGE+W + +D S L LRF+QLYTS ++ +R++LI PP + + K+ +VS H SP + A+ QVVWA+T ++GL R + L++AVG+PV + +++MFSP ++ TE+A FL +++Q AA+ ++ LPA
Sbjct: 1 MDPERVRAYLQAACAGLGFDVGEVWWTSSENGSSTVAAIEDQDSALARSQGRRQLRFVQLYTSKNFESHRAELINPPDHSW-------NDKNDSEAEVSEHVLSPRLVNAISSTAQVVWATTKKQEGLTGRSDVVLQTAVGMPVAVDANGNMCVVVMFSPNNIQSTEDALDFLRSLSQSAATTSIPCLLPA 184 HSP 3 Score: 102.449 bits (254), Expect = 2.968e-18 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0
Query: 1046 GRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDK-NFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGG 1146
G K C + C + S +C+ H G R C GC K AQ +T++C+ HGGG++C P C K AR + NFCAAHGGG RC ++GC++ A+G +C HGGG
Sbjct: 772 GGKRCIHDGCSKSAVGGSKFCTAHGGGRRCSVEGCDKSAQSSTQFCVKHGGGKKCAQPDCDKVARGRTNFCAAHGGGVRCKLEGCNRVAIGKRQLCRLHGGG 873
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|1072224689|gb|OEU09438.1| (hypothetical protein FRACYDRAFT_151950, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 243.817 bits (621), Expect = 1.099e-70 Identity = 115/171 (67.25%), Postives = 139/171 (81.29%), Query Frame = 0
Query: 1050 CKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSG 1220
C+ + CD+ R PYC+ H+G R C+H GC KCAQG+T++CIAHGGGRRCT+PGC KGARDK+FCAAHGGGKRC + CSKSAVGGS +CTAHGGGRRC C +SAQSST FCV+HGGG+KC GC+KV+RGRT +CAAHGGG+RCK+ GCN+ A+GK Q+CR H G
Sbjct: 1 CRIQGCDESALVRRPYCAHHSGNRMCEHNGCSKCAQGSTRFCIAHGGGRRCTFPGCDKGARDKHFCAAHGGGKRCKFEDCSKSAVGGSNLCTAHGGGRRCAVGGCDKSAQSSTKFCVKHGGGKKCSHPGCEKVSRGRTQYCAAHGGGVRCKLAGCNRVAIGKVQLCRAHGG 171 HSP 2 Score: 114.775 bits (286), Expect = 1.420e-25 Identity = 63/153 (41.18%), Postives = 91/153 (59.48%), Query Frame = 0
Query: 1045 TGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGAR-DKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGG 1196
+G ++C+ C + + +C H G R C PGC K A+ + +C AHGGG+RC + C+K A N C AHGGG+RC + GC KSA + C HGGG++C + C + ++ T +C HGGG +C++ GC +VA G+ C AHGGG
Sbjct: 21 SGNRMCEHNGCSKCAQGSTRFCIAHGGGRRCTFPGCDKGAR-DKHFCAAHGGGKRCKFEDCSKSAVGGSNLCTAHGGGRRCAVGGCDKSAQSSTKFCVKHGGGKKCSHPGCEKVSRGRTQYCAAHGGGVRCKLAGCNRVAIGKVQLCRAHGGG 172
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|223997912|ref|XP_002288629.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975737|gb|EED94065.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 243.432 bits (620), Expect = 2.393e-69 Identity = 114/173 (65.90%), Postives = 137/173 (79.19%), Query Frame = 0
Query: 1048 KICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSG 1220
K C+ + C+ + PYC +H G R C+ GC KCAQG T++CIAHGGGRRCT+PGC KGARDK FCAAHGGGKRC GC KSAVGGS CT+HGGGRRC+ + C +SAQSSTNFCV+HGGG+KCQ +GC+KVARGRT +CA HGGG+RCK+ GCN+ A+GK Q+CR H G
Sbjct: 66 KACRIQGCNDQAVSKRPYCLKHCGNRQCEKEGCSKCAQGATRFCIAHGGGRRCTFPGCDKGARDKYFCAAHGGGKRCGQLGCIKSAVGGSPFCTSHGGGRRCKVEGCDKSAQSSTNFCVKHGGGKKCQHDGCEKVARGRTMYCAGHGGGVRCKLEGCNRVAIGKAQLCRAHGG 238 HSP 2 Score: 124.405 bits (311), Expect = 5.910e-28 Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 0
Query: 1045 TGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKN-FCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGG 1196
G + C+ E C + + +C H G R C PGC K A+ + +C AHGGG+RC GC K A + FC +HGGG+RC ++GC KSA + C HGGG++CQ+ C + A+ T +C HGGG +C++EGC +VA G+ C AHGGG
Sbjct: 88 CGNRQCEKEGCSKCAQGATRFCIAHGGGRRCTFPGCDKGAR-DKYFCAAHGGGKRCGQLGCIKSAVGGSPFCTSHGGGRRCKVEGCDKSAQSSTNFCVKHGGGKKCQHDGCEKVARGRTMYCAGHGGGVRCKLEGCNRVAIGKAQLCRAHGGG 239
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|397569005|gb|EJK46480.1| (hypothetical protein THAOC_34847 [Thalassiosira oceanica]) HSP 1 Score: 219.164 bits (557), Expect = 2.313e-54 Identity = 98/146 (67.12%), Postives = 112/146 (76.71%), Query Frame = 0
Query: 1048 KICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKRCCID-GCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAA 1192
K+C+ + C+ A + PYC +H G R C+ GC KCAQG T++CIAHGGGRRCT+PGC KGARDK FCAAHGGGKRC GC KSAVGGS CTAHGGGRRC C +SAQS T FCV+HGGG+KCQ +GC KVARGRT FCAA
Sbjct: 989 KVCRIQGCNMTAASKRPYCEKHCGNRQCERDGCTKCAQGATRFCIAHGGGRRCTFPGCDKGARDKFFCAAHGGGKRCKHPGGCGKSAVGGSNFCTAHGGGRRCAIAGCDKSAQSGTKFCVKHGGGKKCQFKGCAKVARGRTLFCAA 1134 HSP 2 Score: 107.842 bits (268), Expect = 8.556e-20 Identity = 54/125 (43.20%), Postives = 72/125 (57.60%), Query Frame = 0
Query: 1098 RRCTYPGCTKGARDKN-FCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVE-GCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSG 1220
+ C GC A K +C H G ++C DGC+K A G + C AHGGGRRC + C + A+ FC HGGG++C+ GC K A G ++FC AHGGG RC + GC+K+A + C H G
Sbjct: 989 KVCRIQGCNMTAASKRPYCEKHCGNRQCERDGCTKCAQGATRFCIAHGGGRRCTFPGCDKGARDKF-FCAAHGGGKRCKHPGGCGKSAVGGSNFCTAHGGGRRCAIAGCDKSAQSGTKFCVKHGG 1112 HSP 3 Score: 99.3673 bits (246), Expect = 3.557e-17 Identity = 56/128 (43.75%), Postives = 69/128 (53.91%), Query Frame = 0
Query: 1098 RRCTYPGCTKG----ARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCK-VNGCNKAAVGKFQMCRTHSG 1220
R+ P CT+ A FC A K C I GC+ +A C H G R+C+ C++ AQ +T FC+ HGGGR+C GC K AR + FCAAHGGG RCK GC K+AVG C H G
Sbjct: 962 RKVRAPLCTEAKFFYATSPIFCPA-SHSKVCRIQGCNMTAASKRPYCEKHCGNRQCERDGCTKCAQGATRFCIAHGGGRRCTFPGCDKGARDKF-FCAAHGGGKRCKHPGGCGKSAVGGSNFCTAHGG 1087 HSP 4 Score: 88.5817 bits (218), Expect = 6.548e-14 Identity = 63/223 (28.25%), Postives = 100/223 (44.84%), Query Frame = 0
Query: 1 MEQSRLQAYLQSACSVLGFSVGEIWCCNDTKDAAS---------------------PLNLRFIQLYTSPEYDRYRSQLIEPPPDALE---------------------------APARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPV-CSIGKEVVLLLMFSPAVLELTEEAHRFL-YTVAQAASDAVCGFLPA 173
M+ R+++YLQ AC+ LGF +GE+W + S P RF+QLYTS Y RS+L++P + + A RR ++ + ++ H SP + AV + QVVWA+ +GLL R ++L++A+G+PV V +++MFSP +E + +A +L Y AAS + LP
Sbjct: 1 MDADRVRSYLQVACAGLGFDIGEVWWMQNENGTTSQAVAAIAEDSNANISGAITTKPPKKRFLQLYTSKAYCNQRSKLVQPHENENDEDGSSPELSDSKTGVNDRYAGSSSQQLATLRRSSSEVSLELERE-HVLSPRIVEAVTNSTQVVWANCQKSEGLLGRSDVKLQTAIGMPVGVDATGNVWVVVMFSPQNVESSRDAIDYLQYISNSAASTNIPCLLPV 222
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|1052166303|ref|XP_008794859.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103710723 [Phoenix dactylifera]) HSP 1 Score: 191.43 bits (485), Expect = 3.302e-47 Identity = 125/327 (38.23%), Postives = 166/327 (50.76%), Query Frame = 0
Query: 934 NIAASMMPPPATRSPSFAQADHQAP--QSIRFAQSGRQGEKGSVLSVRHDGG------GSDKGTRGETVM---HSGGRNVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMG---------GAGGVTGR----KICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKN-FCAAHGGGKRCCIDG-CSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRC------KVNG-----CNKAAVGKFQMCRTHSGYLK 1223
+I M+ P + AQ + ++ ++ RF G+ S L + H GG G KG G T+ H GG + GC +DY + GG G G+ R K C+ E+C + +S C H G R CQ+P C K AQG+T +C AHGGG+RCT+PGCTKGA FC HGGGKRC G CSKS GG+ C AHGGG+RC +C++SA+ T+FCVRHGGG++C+ EGC K A+G T FC AHGGG RC V G C++ A GK +C H+ ++
Sbjct: 230 SIMTKMLKSPVASTSRIAQPEQRSSNTKNCRFQGCGKGARGASGLCIAHGGGRRCQRPGCHKGAEGRTIYCKAHGGGHRCQHL-----------GCTKSAEGRTDYCIAHGGGRRCSHDGCTRAARGKSGLCIRHGGGKRCRRENCTKSAEGQSGLCISHGGGRRCQYPQCTKGAQGSTMFCKAHGGGKRCTFPGCTKGAEGSTPFCKGHGGGKRCAFQGGCSKSVHGGTQFCVAHGGGKRCSAPECTKSARGRTDFCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCAWGQAGSVFGAGGPPCDRLARGKIGLCAAHTAQVE 545
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|695033935|ref|XP_009404457.1| (PREDICTED: uncharacterized protein LOC103987782 [Musa acuminata subsp. malaccensis] >gi|695033939|ref|XP_009404459.1| PREDICTED: uncharacterized protein LOC103987782 [Musa acuminata subsp. malaccensis] >gi|695033941|ref|XP_009404460.1| PREDICTED: uncharacterized protein LOC103987782 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 189.889 bits (481), Expect = 1.008e-46 Identity = 125/306 (40.85%), Postives = 161/306 (52.61%), Query Frame = 0
Query: 944 ATRSPSFAQADHQAPQSIRFAQSGRQGEKGSVLSVRHDGG------GSDKGTRGETVM---HSGGRNVSSISPHASGAQSETGC----GGLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGAR-DKNFCAAHGGGKRCCIDG-CSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKV--------NG---CNKAAVGKFQMCRTHSGYLK 1223
AT + AQ + ++ +F + S L + H GG G KG G T+ H GGR + S C GG + D G S + G G K C+ E+C + RS C H G R C+HP C K AQG+T +C AHGGG+RCTY GCTKGA FC AHGGGKRC G C+KS GG+ C AHGGG+RC +C++SA+ T+FCVRHGGG++C+VEGC K A+G T FC AHGGG RC NG C++ A GK +C H+ ++
Sbjct: 242 ATSGITQAQQCNSNTKNCQFPGCAKGARGASGLCIAHGGGRRCQKEGCHKGAEGRTIFCKAHGGGRRCQYLGCTKSAEGRTDLCIAHGGGRRCSHEDCTRAARGKSGLCIRHG--GGKRCQKENCTKSAEGRSGLCISHGGGRRCRHPKCTKGAQGSTNFCKAHGGGKRCTYMGCTKGAEGSTTFCKAHGGGKRCAFQGGCTKSVHGGTLFCVAHGGGKRCAAPECTKSARGKTDFCVRHGGGKRCKVEGCGKSAQGSTDFCKAHGGGKRCFWGQPGSNLGNGGPPCDRFARGKKGLCAAHTALVE 545 HSP 2 Score: 164.851 bits (416), Expect = 2.012e-38 Identity = 93/209 (44.50%), Postives = 122/209 (58.37%), Query Frame = 0
Query: 1020 GLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKS--ESCDQPTAKR-----SPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDK-NFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSG 1220
G P + S MHM S G+T + C S ++C P + S C H G R CQ GC K A+G T +C AHGGGRRC Y GCTK A + + C AHGGG+RC + C+++A G S +C HGGG+RCQ ++C++SA+ + C+ HGGGR+C+ C K A+G T+FC AHGGG RC GC K A G C+ H G
Sbjct: 224 GQPDSSSSTMMHMLKSSVA--TSGITQAQQCNSNTKNCQFPGCAKGARGASGLCIAHGGGRRCQKEGCHKGAEGRTIFCKAHGGGRRCQYLGCTKSAEGRTDLCIAHGGGRRCSHEDCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGRSGLCISHGGGRRCRHPKCTKGAQGSTNFCKAHGGGKRCTYMGCTKGAEGSTTFCKAHGG 430
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|743770911|ref|XP_010915741.1| (PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|743770913|ref|XP_010915742.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|743770915|ref|XP_010915743.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|743770917|ref|XP_010915744.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|743770919|ref|XP_010915745.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|1130655710|ref|XP_019704965.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|1130655713|ref|XP_019704966.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis] >gi|1130655717|ref|XP_019704967.1| PREDICTED: uncharacterized protein LOC105040762 [Elaeis guineensis]) HSP 1 Score: 189.889 bits (481), Expect = 1.037e-46 Identity = 126/323 (39.01%), Postives = 164/323 (50.77%), Query Frame = 0
Query: 939 MMPPPATRSPSFA--QADHQAPQSIRFAQSGRQGEKGSVLSVRHDGG------GSDKGTRGETVM---HSGGRNVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMGGAGGVT--------------GRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKN-FCAAHGGGKRCC-IDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRC------KVNG-----CNKAAVGKFQMCRTHSGYLK 1223
M+ P S Q + ++ +F G+ S L + H GG G KG G+T+ H GGR + GC +DY + GG GG T G K C+ E+C + +S C H G R CQ+P C K AQG+T +C AHGGG+RCT+PGCTKGA FC HGGGKRC + GCSKS GG+ C AHGGG+RC +C++SA+ TNFCVRHGGG++C+ EGC K A+G T FC AHGGG RC V G C++ A GK +C H+ ++
Sbjct: 234 MLKKPVASSSGITHPQQHSSSMRNCQFQGCGKGARGASGLCIAHGGGRRCQRPGCHKGAEGKTIYCKAHGGGRRCQYL-----------GCTKSAEGRTDYCIAHGGGRRCS-HGGCTRAARGKSGLCIRHGGGKRCQRENCTKSAEGQSGLCISHGGGRRCQYPQCTKGAQGSTMFCKAHGGGKRCTFPGCTKGAEGSTPFCKGHGGGKRCAFLGGCSKSVHGGTLFCVAHGGGKRCAAPECTKSARGRTNFCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGQAGSVFGAGCPPCDRFARGKIGLCAAHTAQVE 544 HSP 2 Score: 174.096 bits (440), Expect = 1.793e-41 Identity = 92/185 (49.73%), Postives = 115/185 (62.16%), Query Frame = 0
Query: 1046 GRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKN-FCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCK-VNGCNKAAVGKFQMCRTHSGYLKKRASE 1228
G + C+ C + ++ YC H G R CQ+ GC K A+G T YCIAHGGGRRC++ GCT+ AR K+ C HGGGKRC + C+KSA G S +C +HGGGRRCQY C++ AQ ST FC HGGG++C GC K A G T FC HGGG RC + GC+K+ G C H G + A E
Sbjct: 279 GGRRCQRPGCHKGAEGKTIYCKAHGGGRRCQYLGCTKSAEGRTDYCIAHGGGRRCSHGGCTRAARGKSGLCIRHGGGKRCQRENCTKSAEGQSGLCISHGGGRRCQYPQCTKGAQGSTMFCKAHGGGKRCTFPGCTKGAEGSTPFCKGHGGGKRCAFLGGCSKSVHGGTLFCVAHGGGKRCAAPE 463
BLAST of EWM25546.1 vs. NCBI_GenBank
Match: gi|661891232|emb|CDP05114.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 189.504 bits (480), Expect = 1.130e-46 Identity = 124/313 (39.62%), Postives = 157/313 (50.16%), Query Frame = 0
Query: 943 PATRSPSFAQADHQAPQS--------IRFAQSGRQGEKGSVLSVRHDGG------GSDKGTRGETVM---HSGGRNVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKN-FCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQYQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCKVNGCNKAAVGKFQMCRTHSGYLKKRASEQQEGDEEGG 1237
PAT + + A PQS RF R S L + H GG G KG G TV H GGR + GC +D+ + GG GR+ C + C + +S C +H G + C+ C K A+G + CI+HGGGRRC YP C KGA+ FC AHGGGKRC GC+K A G + +C HGGG+RC ++ C++S T FCV HGGG++C + GC K ARGRT+FC HGGG RCK GC K+A G C+ H G KR S +Q G E GG
Sbjct: 214 PATPRNTVSCASGAIPQSQRRINVKTCRFEGCIRGARGASGLCIAHGGGRRCQRAGCQKGAEGRTVFCKAHGGGRRCQHL-----------GCTKSAEGRTDFCIGHGG-----------GRR-CNHDGCTRAARGKSGLCIRHGGGKRCKMENCTKSAEGISGLCISHGGGRRCQYPTCAKGAQGSTVFCKAHGGGKRCTYLGCTKGAEGSTPLCKGHGGGKRCTFEGCTKSVHGGTLFCVSHGGGKRCSMAGCTKSARGRTNFCVRHGGGKRCKHEGCTKSAQGSTDFCKAHGG--GKRCSWEQVGSEFGG 501 The following BLAST results are available for this feature:
BLAST of EWM25546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|