EWM25564.1, cds5112 (CDS) Nannochloropsis gaditana

Overview
NameEWM25564.1
Unique Namecds5112
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:182400..182940 -
Alignment locationCM002465.1:181980..182192 -
Alignment locationCM002465.1:181647..181747 -
Alignment locationCM002465.1:181322..181418 -
Alignment locationCM002465.1:180931..181097 -
Alignment locationCM002465.1:180692..180831 -
Alignment locationCM002465.1:180141..180486 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25564.1
Productacid sphingomyelinase-like phosphodiesterase 3b
Orig transcript idgnl|cribi|Naga_100359g3.216.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:182400..182940 -
CM002465.1supercontigCM002465.1:181980..182192 -
CM002465.1supercontigCM002465.1:181647..181747 -
CM002465.1supercontigCM002465.1:181322..181418 -
CM002465.1supercontigCM002465.1:180931..181097 -
CM002465.1supercontigCM002465.1:180692..180831 -
CM002465.1supercontigCM002465.1:180141..180486 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like
IPR004843Calcineurin-like_PHP_apaH
Homology
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|585107339|gb|EWM25564.1| (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 1109.36 bits (2868), Expect = 0.000e+0
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0
Query:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGRPLIACLPCRGPRREDREEMNRPRRGSSARTRTSGIPPPGGHCRGPRAER 534
            MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGRPLIACLPCRGPRREDREEMNRPRRGSSARTRTSGIPPPGGHCRGPRAER
Sbjct:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGRPLIACLPCRGPRREDREEMNRPRRGSSARTRTSGIPPPGGHCRGPRAER 534          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|585107338|gb|EWM25563.1| (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSG 484
            MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSG
Sbjct:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSG 484          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|1050389876|gb|OCT92068.1| (hypothetical protein XELAEV_18015125mg [Xenopus laevis])

HSP 1 Score: 118.627 bits (296), Expect = 4.430e-25
Identity = 88/320 (27.50%), Postives = 147/320 (45.94%), Query Frame = 0
Query:  169 YHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMR----RVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYY--RFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPD--AHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSAD---WNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVG-----VLVSAGVTPLGGGSLTYPGEKDAAN 472
            +H TD H++P Y     V  + RK  C   G+ +      D  +     CD P  L+   + AM+++ P+  ++L+TGD +  H+ NE+L      E ++     + +  P      A+GN+D  P S+   HN    Y++     P           K E+  +F+ G YY    +D     R++V+N+ L+   YD++ L   + D      W+E +L  A   GE+V ++ H+PPG+     D   + E F  R+I +  +  G I  Q +GHH  +  + F  E G     + ++ GVTP      T PG ++ AN
Sbjct:   24 WHLTDLHLDPNY----TVTSDPRKV-CPSAGDQLVT----DAGQWGNYLCDSPRVLINSSIYAMKSILPKPDFILWTGD-DTPHVPNEQLGEEAVLEIIKWLTNLIQQIFPTTKVYSALGNHDFHPKSQLPPHNNSIYYRISEFWSPWL---------KNESVISFQKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEEQLNNAYLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRFIEIIQKHHGVIQGQFFGHHHTDSFKMFYSESGTPISSMFIAPGVTPW---KTTLPGVENGAN 318          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|1069331887|ref|XP_018104968.1| (PREDICTED: acid sphingomyelinase-like phosphodiesterase 3b [Xenopus laevis])

HSP 1 Score: 117.857 bits (294), Expect = 6.832e-25
Identity = 88/320 (27.50%), Postives = 147/320 (45.94%), Query Frame = 0
Query:  169 YHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMR----RVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYY--RFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPD--AHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSAD---WNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVG-----VLVSAGVTPLGGGSLTYPGEKDAAN 472
            +H TD H++P Y     V  + RK  C   G+ +      D  +     CD P  L+   + AM+++ P+  ++L+TGD +  H+ NE+L      E ++     + +  P      A+GN+D  P S+   HN    Y++     P           K E+  +F+ G YY    +D     R++V+N+ L+   YD++ L   + D      W+E +L  A   GE+V ++ H+PPG+     D   + E F  R+I +  +  G I  Q +GHH  +  + F  E G     + ++ GVTP      T PG ++ AN
Sbjct:   12 WHLTDLHLDPNY----TVTSDPRKV-CPSAGDQLVT----DAGQWGNYLCDSPRVLINSSIYAMKSILPKPDFILWTGD-DTPHVPNEQLGEEAVLEIIKWLTNLIQQIFPTTKVYSALGNHDFHPKSQLPPHNNSIYYRISEFWSPWL---------KNESVISFQKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEEQLNNAYLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRFIEIIQKHHGVIQGQFFGHHHTDSFKMFYSESGTPISSMFIAPGVTPW---KTTLPGVENGAN 306          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|1069478763|ref|XP_018126782.1| (hypothetical protein VE01_09028 [Pseudogymnoascus verrucosus] >gi|1040557558|gb|OBT93049.1| hypothetical protein VE01_09028 [Pseudogymnoascus verrucosus])

HSP 1 Score: 110.538 bits (275), Expect = 5.030e-22
Identity = 81/292 (27.74%), Postives = 135/292 (46.23%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLW---------APRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  V    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++A+ P+ ++ +FTGD+ AH L + +      +  +   +  L +L  VY  IGN+D+ P +            VQ  +    + + G      E A T    G Y  +     +R++ +NS  +          P  ++       P+    W+  EL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  144 HISDTHVDLSYE--VGANYNCTKPICCRSYTPNDAPGHN-----SYPAGEFGNPLCDPPVTLQESMVQAIKAIAPDAAFTVFTGDVVAHDLWSVDKAEVLTD--LNSTYSILSNLDLVYPVIGNHDVVPVNCIPPTTISTTLGVQWAYDTLASYWNGWISTSGE-ANTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQND-------PNGQFTWLIKELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNKIVNRYDATIAAMFYGHTHVDEFEISYS 414          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|682452766|gb|KFZ11720.1| (hypothetical protein V501_04593 [Pseudogymnoascus sp. VKM F-4519 (FW-2642)])

HSP 1 Score: 110.538 bits (275), Expect = 5.658e-22
Identity = 81/292 (27.74%), Postives = 135/292 (46.23%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLW---------APRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  V    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++A+ P+ ++ +FTGD+ AH L + +      +  +   +  L +L  VY  IGN+D+ P +            VQ  +    + + G      E A T    G Y  +     +R++ +NS  +          P  ++       P+    W+  EL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  144 HISDTHVDLSYE--VGANYNCTKPICCRSYTPNDAPGHN-----SYPAGEFGNPLCDPPVTLQESMVQAIKAIAPDAAFTVFTGDVVAHDLWSVDKAEVLTD--LNSTYSILSNLDLVYPVIGNHDVVPVNCIPPTTISTTLGVQWAYDTLASYWNGWISTSGE-ANTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQND-------PNGQFTWLIKELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNKIVNRYDATIAAMFYGHTHVDEFEISYS 414          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|1040518063|gb|OBT57112.1| (hypothetical protein VE04_03270 [Pseudogymnoascus sp. 24MN13])

HSP 1 Score: 110.538 bits (275), Expect = 5.974e-22
Identity = 81/292 (27.74%), Postives = 135/292 (46.23%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLW---------APRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  V    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++A+ P+ ++ +FTGD+ AH L + +      +  +   +  L +L  VY  IGN+D+ P +            VQ  +    + + G      E A T    G Y  +     +R++ +NS  +          P  ++       P+    W+  EL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  144 HISDTHVDLSYE--VGANYNCTKPICCRSYTPNDAPGHN-----SYPAGEFGNPLCDPPVTLQESMVQAIKAIAPDAAFTVFTGDVVAHDLWSVDKAEVLTD--LNSTYSILSNLDLVYPVIGNHDVVPVNCIPPTTISTTLGVQWAYDTLASYWNGWISTSGE-ANTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQND-------PNGQFTWLIKELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNKIVNRYDATIAAMFYGHTHVDEFEISYS 414          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|1176085702|ref|XP_020613115.1| (acid sphingomyelinase-like phosphodiesterase 3a [Orbicella faveolata] >gi|1176085704|ref|XP_020613116.1| acid sphingomyelinase-like phosphodiesterase 3a [Orbicella faveolata])

HSP 1 Score: 109.383 bits (272), Expect = 8.018e-22
Identity = 85/308 (27.60%), Postives = 137/308 (44.48%), Query Frame = 0
Query:  153 LGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQ--AVDPEVSYVLFTGDMNAHHLCNE----ELVRTTQNEFMRRVHRALPHLPFVYAIGNNDL-----WPNSKNSEHNFEALYQVQLKHCPQC--AIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSAD--WNERFLDRYIALCTRFAGTITA-QLYGHHSKEYIRSFSP 444
            LG T S  D+       H  D H +P Y+K +     CR     +   N    +    +E   +GCD P SL+   L+A++  +V+ +VS+VL TGD + H +  +    + V         + H     +P    +GNNDL      PNS +  +     Y   L  C  C  ++ Q T +   E  ++F  GGYY+       + +LV+NS  W+     S   V      ++W+E +LE AK  G++V+L  HIP G   +S +  W   + + +++L  +  G I   Q + H  K+  R   P
Sbjct:   79 LGRTPSNDDIMKFV---HLADIHYDPFYNKTISRSNFCRS----QGASNDTAKYI---AEYGRIGCDSPASLIGNTLDAIKNVSVEEDVSFVLLTGDFSGHRMWTQYAGPQRVLDNIAYVSNQTHLRFSDIPVFPVVGNNDLPGHYVLPNSTSDWYKKLLSYWEPLILCSGCPGSVKQPTTQAVLE--KSFLEGGYYKVSIAGGKMVLLVLNSLYWSAYVGGSADIVGKAKRQLEWLETQLELAKSQGQKVMLAGHIPAGIDTYSNNPYWLSNYTNSFVSLVAKKYGDIVVGQFFSHTHKDDFRLHIP 374          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|544210984|ref|XP_005535892.1| (similar to lysosomal sphingomyelin phosphodiesterase [Cyanidioschyzon merolae strain 10D] >gi|449016204|dbj|BAM79606.1| similar to lysosomal sphingomyelin phosphodiesterase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 109.768 bits (273), Expect = 1.309e-21
Identity = 100/352 (28.41%), Postives = 147/352 (41.76%), Query Frame = 0
Query:  201 NVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQN------------------EFMRRVHRALPHLPFVYAIGNNDLWPN----------SKNSEHNFEALYQ-VQLKHCPQCAIFQGTEEEKAENAR-TFRAGGYYRFRDHAKHVRILVVNSGLW-----------------APRYDNSDLPV-----ALPDA-----HMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPE-----------VGVLVSAGVTP--LGGGSLTYPGEKDAANPTFRHLIFTK 482
            +V   +TY        GCDPP+ LLE + EAM+ VD +  ++L TGD+  H L +   V  + N                  E  RR  R       +  +GN DL+P           S    ++ E   Q V+ +   +  +  G  + + E  R +F  GGYYR  D  K +R+LV NS  +                 +P      LP       LPDA        W+E EL+ A++ G  V L SHI PG    S  W   ++ R+  L T++A T+T Q YG  S+E +R   P            + +L++ G+TP  + GG+           PTFRH  F +
Sbjct:  241 DVATTYTYGRP-----GCDPPLPLLESLTEAMKKVDSDPDFILITGDLAPHDLPSRAYVLRSLNASAQHLSATVCGALGNSGESQRRSPRC------IVVVGNVDLFPTLHIPIEAKPVSSAERYDAENNNQPVRFRDLYELYVTAGILDPENEALRRSFTVGGYYRAYDDGK-LRVLVYNSLHYIAGRLFSSASALNRTNASPALPFYALPCEQWKQVLPDADDPAGQFAWLEEELQDAEQNGRSVFLASHIGPGSKTGSRAWCAPYVTRFADLLTKYADTVTMQFYGDLSREELRLIEPYGSPNGTSEMRGLALLINPGLTPRRMPGGA-----------PTFRHCFFDR 569          
BLAST of EWM25564.1 vs. NCBI_GenBank
Match: gi|1040531820|gb|OBT68844.1| (hypothetical protein VE03_02104 [Pseudogymnoascus sp. 23342-1-I1])

HSP 1 Score: 106.686 bits (265), Expect = 1.114e-20
Identity = 82/287 (28.57%), Postives = 134/287 (46.69%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHL--CNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGL-WAPRYDNSDLPVAL-PDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  +    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++ + P+ ++ +FTGD+ AH L   NE  V T  N      +  L +L  VY  +GN+D+ P +            VQ  +      +        E   T    G Y  +     +R++ +NS   +   +   + P+   P+    W+ NEL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  150 HISDTHVDLSYE--IGANYNCTKPICCRSYTPADAPGNN-----SYPAGEFGNPLCDPPVTLQESMVQAIKTIAPDAAFTVFTGDVVAHDLWSVNEAEVLTDFN----STYSILSNLDLVYPVMGNHDVVPVNCIPPTTISTTLGVQWAYDTLAGYWNEWISTSGE-VNTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQNDPNGQFTWLVNELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNQIVNRYDATIAAMFYGHTHVDEFEVSYS 420          
The following BLAST results are available for this feature:
BLAST of EWM25564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107339|gb|EWM25564.1|0.000e+0100.00acid sphingomyelinase-like phosphodiesterase 3b [N... [more]
gi|585107338|gb|EWM25563.1|0.000e+0100.00acid sphingomyelinase-like phosphodiesterase 3b [N... [more]
gi|1050389876|gb|OCT92068.1|4.430e-2527.50hypothetical protein XELAEV_18015125mg [Xenopus la... [more]
gi|1069331887|ref|XP_018104968.1|6.832e-2527.50PREDICTED: acid sphingomyelinase-like phosphodiest... [more]
gi|1069478763|ref|XP_018126782.1|5.030e-2227.74hypothetical protein VE01_09028 [Pseudogymnoascus ... [more]
gi|682452766|gb|KFZ11720.1|5.658e-2227.74hypothetical protein V501_04593 [Pseudogymnoascus ... [more]
gi|1040518063|gb|OBT57112.1|5.974e-2227.74hypothetical protein VE04_03270 [Pseudogymnoascus ... [more]
gi|1176085702|ref|XP_020613115.1|8.018e-2227.60acid sphingomyelinase-like phosphodiesterase 3a [O... [more]
gi|544210984|ref|XP_005535892.1|1.309e-2128.41similar to lysosomal sphingomyelin phosphodiestera... [more]
gi|1040531820|gb|OBT68844.1|1.114e-2028.57hypothetical protein VE03_02104 [Pseudogymnoascus ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5124rna5124Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications