EWM25563.1, cds5111 (CDS) Nannochloropsis gaditana

Overview
NameEWM25563.1
Unique Namecds5111
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:182400..182940 -
Alignment locationCM002465.1:181980..182192 -
Alignment locationCM002465.1:181647..181747 -
Alignment locationCM002465.1:181322..181418 -
Alignment locationCM002465.1:180931..181097 -
Alignment locationCM002465.1:180692..180831 -
Alignment locationCM002465.1:180296..180486 -
Alignment locationCM002465.1:179775..180085 -
Alignment locationCM002465.1:179226..179519 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25563.1
Productacid sphingomyelinase-like phosphodiesterase 3b
Orig transcript idgnl|cribi|Naga_100359g3.215.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:182400..182940 -
CM002465.1supercontigCM002465.1:181980..182192 -
CM002465.1supercontigCM002465.1:181647..181747 -
CM002465.1supercontigCM002465.1:181322..181418 -
CM002465.1supercontigCM002465.1:180931..181097 -
CM002465.1supercontigCM002465.1:180692..180831 -
CM002465.1supercontigCM002465.1:180296..180486 -
CM002465.1supercontigCM002465.1:179775..180085 -
CM002465.1supercontigCM002465.1:179226..179519 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_apaH
IPR029052Metallo-depent_PP-like
Homology
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|585107338|gb|EWM25563.1| (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 1429.08 bits (3698), Expect = 0.000e+0
Identity = 684/684 (100.00%), Postives = 684/684 (100.00%), Query Frame = 0
Query:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGFYDMWSFYLDLSSGERERFLGEKRPRTSKTSPATPGEKAREESVGGGFLFPSSTRKEKDREAFVSALESAAAATPVTAMGRGDKRGVSAKFLEAVKAANSKGWDLMYSFRQTYKCPDVSPASIHLAADRILRDSHYTTRYEMYLGGLHSPHRLITCDVHTRTWDSEEVETCFDRLCLYDVSQECAALEPKKKKKHHHQMV 684
            MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGFYDMWSFYLDLSSGERERFLGEKRPRTSKTSPATPGEKAREESVGGGFLFPSSTRKEKDREAFVSALESAAAATPVTAMGRGDKRGVSAKFLEAVKAANSKGWDLMYSFRQTYKCPDVSPASIHLAADRILRDSHYTTRYEMYLGGLHSPHRLITCDVHTRTWDSEEVETCFDRLCLYDVSQECAALEPKKKKKHHHQMV
Sbjct:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSGFYDMWSFYLDLSSGERERFLGEKRPRTSKTSPATPGEKAREESVGGGFLFPSSTRKEKDREAFVSALESAAAATPVTAMGRGDKRGVSAKFLEAVKAANSKGWDLMYSFRQTYKCPDVSPASIHLAADRILRDSHYTTRYEMYLGGLHSPHRLITCDVHTRTWDSEEVETCFDRLCLYDVSQECAALEPKKKKKHHHQMV 684          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|585107339|gb|EWM25564.1| (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSG 484
            MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSG
Sbjct:    1 MVWCNASRSGGEGDDLPLTQGAGTWEGGYSAVCEAETTLPSISERVSTLEMQPDRNPPTITRTASNLRTGNSFFSAASALPSWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRAISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTPLGGGSLTYPGEKDAANPTFRHLIFTKSG 484          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|1050389876|gb|OCT92068.1| (hypothetical protein XELAEV_18015125mg [Xenopus laevis])

HSP 1 Score: 126.716 bits (317), Expect = 1.654e-27
Identity = 98/364 (26.92%), Postives = 167/364 (45.88%), Query Frame = 0
Query:  169 YHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMR----RVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYY--RFRDHAKHVRILVVNSGLWAPRYDNSDLPVAL--PDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSAD---WNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVG-----VLVSAGVTPLGGGSLTYPG-EKDAANPTFRHLIFTKSGF--YDMWSFYLDLSSGERERFLGEKRPRTSK 513
            +H TD H++P Y     V  + RK  C   G+ +      D  +     CD P  L+   + AM+++ P+  ++L+TGD +  H+ NE+L      E ++     + +  P      A+GN+D  P S+   HN    Y++     P           K E+  +F+ G YY    +D     R++V+N+ L+   YD++ L   +  P     W+E +L  A   GE+V ++ H+PPG+     D   + E F  R+I +  +  G I  Q +GHH  +  + F  E G     + ++ GVTP      T PG E  A NP  R + + +     +D+ ++YL+L+   +     EK  R ++
Sbjct:   24 WHLTDLHLDPNY----TVTSDPRKV-CPSAGDQLVT----DAGQWGNYLCDSPRVLINSSIYAMKSILPKPDFILWTGD-DTPHVPNEQLGEEAVLEIIKWLTNLIQQIFPTTKVYSALGNHDFHPKSQLPPHNNSIYYRISEFWSPWL---------KNESVISFQKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEEQLNNAYLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRFIEIIQKHHGVIQGQFFGHHHTDSFKMFYSESGTPISSMFIAPGVTPW---KTTLPGVENGANNPGIRVVEYDRQNLQVFDIVTYYLNLTYANKVSPRWEKEYRLTE 362          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|1069331887|ref|XP_018104968.1| (PREDICTED: acid sphingomyelinase-like phosphodiesterase 3b [Xenopus laevis])

HSP 1 Score: 126.716 bits (317), Expect = 1.761e-27
Identity = 98/364 (26.92%), Postives = 167/364 (45.88%), Query Frame = 0
Query:  169 YHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMR----RVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYY--RFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDA--HMDWVENELEAAKEGGEQVVLISHIPPGHVRHSAD---WNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVG-----VLVSAGVTPLGGGSLTYPG-EKDAANPTFRHLIFTKSGF--YDMWSFYLDLSSGERERFLGEKRPRTSK 513
            +H TD H++P Y     V  + RK  C   G+ +      D  +     CD P  L+   + AM+++ P+  ++L+TGD +  H+ NE+L      E ++     + +  P      A+GN+D  P S+   HN    Y++     P           K E+  +F+ G YY    +D     R++V+N+ L+   YD++ L   + D      W+E +L  A   GE+V ++ H+PPG+     D   + E F  R+I +  +  G I  Q +GHH  +  + F  E G     + ++ GVTP      T PG E  A NP  R + + +     +D+ ++YL+L+   +     EK  R ++
Sbjct:   12 WHLTDLHLDPNY----TVTSDPRKV-CPSAGDQLVT----DAGQWGNYLCDSPRVLINSSIYAMKSILPKPDFILWTGD-DTPHVPNEQLGEEAVLEIIKWLTNLIQQIFPTTKVYSALGNHDFHPKSQLPPHNNSIYYRISEFWSPWL---------KNESVISFQKGAYYSEELKDVGAAGRMIVLNTNLY---YDSNSLTANMKDPGDQFQWLEEQLNNAYLKGEKVYIVGHVPPGYFEKKRDKPWFREEFNKRFIEIIQKHHGVIQGQFFGHHHTDSFKMFYSESGTPISSMFIAPGVTPW---KTTLPGVENGANNPGIRVVEYDRQNLQVFDIVTYYLNLTYANKVSPRWEKEYRLTE 350          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|961792536|ref|XP_014828329.1| (PREDICTED: acid sphingomyelinase-like phosphodiesterase 3b [Poecilia mexicana])

HSP 1 Score: 111.309 bits (277), Expect = 2.272e-22
Identity = 106/378 (28.04%), Postives = 167/378 (44.18%), Query Frame = 0
Query:  169 YHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEEL----VRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEE-----KAENARTFRAGGYY--RFRDHAKHVRILVVNSGLWAPRYDNSD-LPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHV--RHSADW-NERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSA-----GVTPLGGGSLTYPGEKDAA-NPTFRHLIFTKSGFY--DMWSFYLDLS--SGERERFLGEKRPRTSKTSP-ATPG 520
            +H TD H +P Y        +  K  C   G     +      +     CD P  L+   + AM+ + P+  ++++TGD +  H+ NE+L    V +      + +    PH     A+GN+D  P S             QL   P  +I+    E      +A++  +F+ GGYY  +  + A + R+LV+N+ L+   Y N + +    P     W++  L AA    E+V +I HIPPG    + S  W  ++F  RY+ L  +    I  Q +GHH  +  R F    G+ +SA     GVTP      T PG KD A NP  R   +        D+ ++YL+L+  + + ER+  E R   S   P A+PG
Sbjct:   24 WHITDLHWDPTYKL-----TDNPKLVCASSGNRPALS----AGKFGAYACDAPWHLINSSVYAMKRILPDPDFIVWTGD-DTPHVQNEDLGEEKVISIIGNLTQIITEVFPHTKVYSALGNHDYHPKS-------------QLPPGPN-SIYDKIAEMWHGWLEADSKESFKNGGYYTEKLLNRAGY-RVLVLNTNLY--YYQNKETMNDDDPAGQFSWLDQTLTAANNNKEKVYIIGHIPPGFFEKKRSTSWFTKKFNTRYLELIQKHHSVIIGQFFGHHHTDSFRMFYTTEGLPISAMFLSPGVTPW---ETTLPGVKDGANNPGIRVFEYDTETLLVKDVVTYYLNLTHANADAERWEKEYRLTESFRVPDASPG 371          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|1069478763|ref|XP_018126782.1| (hypothetical protein VE01_09028 [Pseudogymnoascus verrucosus] >gi|1040557558|gb|OBT93049.1| hypothetical protein VE01_09028 [Pseudogymnoascus verrucosus])

HSP 1 Score: 110.923 bits (276), Expect = 9.850e-22
Identity = 81/292 (27.74%), Postives = 135/292 (46.23%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLW---------APRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  V    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++A+ P+ ++ +FTGD+ AH L + +      +  +   +  L +L  VY  IGN+D+ P +            VQ  +    + + G      E A T    G Y  +     +R++ +NS  +          P  ++       P+    W+  EL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  144 HISDTHVDLSYE--VGANYNCTKPICCRSYTPNDAPGHN-----SYPAGEFGNPLCDPPVTLQESMVQAIKAIAPDAAFTVFTGDVVAHDLWSVDKAEVLTD--LNSTYSILSNLDLVYPVIGNHDVVPVNCIPPTTISTTLGVQWAYDTLASYWNGWISTSGE-ANTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQND-------PNGQFTWLIKELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNKIVNRYDATIAAMFYGHTHVDEFEISYS 414          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|682452766|gb|KFZ11720.1| (hypothetical protein V501_04593 [Pseudogymnoascus sp. VKM F-4519 (FW-2642)])

HSP 1 Score: 110.923 bits (276), Expect = 1.030e-21
Identity = 81/292 (27.74%), Postives = 135/292 (46.23%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLW---------APRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  V    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++A+ P+ ++ +FTGD+ AH L + +      +  +   +  L +L  VY  IGN+D+ P +            VQ  +    + + G      E A T    G Y  +     +R++ +NS  +          P  ++       P+    W+  EL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  144 HISDTHVDLSYE--VGANYNCTKPICCRSYTPNDAPGHN-----SYPAGEFGNPLCDPPVTLQESMVQAIKAIAPDAAFTVFTGDVVAHDLWSVDKAEVLTD--LNSTYSILSNLDLVYPVIGNHDVVPVNCIPPTTISTTLGVQWAYDTLASYWNGWISTSGE-ANTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQND-------PNGQFTWLIKELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNKIVNRYDATIAAMFYGHTHVDEFEISYS 414          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|1040518063|gb|OBT57112.1| (hypothetical protein VE04_03270 [Pseudogymnoascus sp. 24MN13])

HSP 1 Score: 110.923 bits (276), Expect = 1.048e-21
Identity = 81/292 (27.74%), Postives = 135/292 (46.23%), Query Frame = 0
Query:  170 HFTDAHIEPLYDKHVVVKGNCRKPDCCKK-------GENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVY-AIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLW---------APRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGH-HSKEYIRSFS 443
            H +D H++  Y+  V    NC KP CC+        G N     +Y   E     CDPPV+L E +++A++A+ P+ ++ +FTGD+ AH L + +      +  +   +  L +L  VY  IGN+D+ P +            VQ  +    + + G      E A T    G Y  +     +R++ +NS  +          P  ++       P+    W+  EL++A++ G+ V +ISHIPPG    S+D+   F + +  +  R+  TI A  YGH H  E+  S+S
Sbjct:  144 HISDTHVDLSYE--VGANYNCTKPICCRSYTPNDAPGHN-----SYPAGEFGNPLCDPPVTLQESMVQAIKAIAPDAAFTVFTGDVVAHDLWSVDKAEVLTD--LNSTYSILSNLDLVYPVIGNHDVVPVNCIPPTTISTTLGVQWAYDTLASYWNGWISTSGE-ANTANEYGAYSVKYPGGKLRVISLNSVFYYTLNFWLYEEPMQND-------PNGQFTWLIKELQSAEDAGDNVYIISHIPPG----SSDFFHSFSNTFNKIVNRYDATIAAMFYGHTHVDEFEISYS 414          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|1176085702|ref|XP_020613115.1| (acid sphingomyelinase-like phosphodiesterase 3a [Orbicella faveolata] >gi|1176085704|ref|XP_020613116.1| acid sphingomyelinase-like phosphodiesterase 3a [Orbicella faveolata])

HSP 1 Score: 110.153 bits (274), Expect = 1.210e-21
Identity = 83/308 (26.95%), Postives = 137/308 (44.48%), Query Frame = 0
Query:  153 LGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQ--AVDPEVSYVLFTGDMNAHHLCNE----ELVRTTQNEFMRRVHRALPHLPFVYAIGNNDL-----WPNSKNSEHNFEALYQVQLKHCPQC--AIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSAD--WNERFLDRYIALCT-RFAGTITAQLYGHHSKEYIRSFSP 444
            LG T S  D+       H  D H +P Y+K +     CR     +   N    +    +E   +GCD P SL+   L+A++  +V+ +VS+VL TGD + H +  +    + V         + H     +P    +GNNDL      PNS +  +     Y   L  C  C  ++ Q T +   E  ++F  GGYY+       + +LV+NS  W+     S   V      ++W+E +LE AK  G++V+L  HIP G   +S +  W   + + +++L   ++   +  Q + H  K+  R   P
Sbjct:   79 LGRTPSNDDIMKFV---HLADIHYDPFYNKTISRSNFCRS----QGASNDTAKYI---AEYGRIGCDSPASLIGNTLDAIKNVSVEEDVSFVLLTGDFSGHRMWTQYAGPQRVLDNIAYVSNQTHLRFSDIPVFPVVGNNDLPGHYVLPNSTSDWYKKLLSYWEPLILCSGCPGSVKQPTTQAVLE--KSFLEGGYYKVSIAGGKMVLLVLNSLYWSAYVGGSADIVGKAKRQLEWLETQLELAKSQGQKVMLAGHIPAGIDTYSNNPYWLSNYTNSFVSLVAKKYGDIVVGQFFSHTHKDDFRLHIP 374          
BLAST of EWM25563.1 vs. NCBI_GenBank
Match: gi|544210984|ref|XP_005535892.1| (similar to lysosomal sphingomyelin phosphodiesterase [Cyanidioschyzon merolae strain 10D] >gi|449016204|dbj|BAM79606.1| similar to lysosomal sphingomyelin phosphodiesterase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 110.153 bits (274), Expect = 2.004e-21
Identity = 100/352 (28.41%), Postives = 147/352 (41.76%), Query Frame = 0
Query:  201 NVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQN------------------EFMRRVHRALPHLPFVYAIGNNDLWPN----------SKNSEHNFEALYQ-VQLKHCPQCAIFQGTEEEKAENAR-TFRAGGYYRFRDHAKHVRILVVNSGLW-----------------APRYDNSDLPV-----ALPDA-----HMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPE-----------VGVLVSAGVTP--LGGGSLTYPGEKDAANPTFRHLIFTK 482
            +V   +TY        GCDPP+ LLE + EAM+ VD +  ++L TGD+  H L +   V  + N                  E  RR  R       +  +GN DL+P           S    ++ E   Q V+ +   +  +  G  + + E  R +F  GGYYR  D  K +R+LV NS  +                 +P      LP       LPDA        W+E EL+ A++ G  V L SHI PG    S  W   ++ R+  L T++A T+T Q YG  S+E +R   P            + +L++ G+TP  + GG+           PTFRH  F +
Sbjct:  241 DVATTYTYGRP-----GCDPPLPLLESLTEAMKKVDSDPDFILITGDLAPHDLPSRAYVLRSLNASAQHLSATVCGALGNSGESQRRSPRC------IVVVGNVDLFPTLHIPIEAKPVSSAERYDAENNNQPVRFRDLYELYVTAGILDPENEALRRSFTVGGYYRAYDDGK-LRVLVYNSLHYIAGRLFSSASALNRTNASPALPFYALPCEQWKQVLPDADDPAGQFAWLEEELQDAEQNGRSVFLASHIGPGSKTGSRAWCAPYVTRFADLLTKYADTVTMQFYGDLSREELRLIEPYGSPNGTSEMRGLALLINPGLTPRRMPGGA-----------PTFRHCFFDR 569          
The following BLAST results are available for this feature:
BLAST of EWM25563.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107338|gb|EWM25563.1|0.000e+0100.00acid sphingomyelinase-like phosphodiesterase 3b [N... [more]
gi|585107339|gb|EWM25564.1|0.000e+0100.00acid sphingomyelinase-like phosphodiesterase 3b [N... [more]
gi|1050389876|gb|OCT92068.1|1.654e-2726.92hypothetical protein XELAEV_18015125mg [Xenopus la... [more]
gi|1069331887|ref|XP_018104968.1|1.761e-2726.92PREDICTED: acid sphingomyelinase-like phosphodiest... [more]
gi|961792536|ref|XP_014828329.1|2.272e-2228.04PREDICTED: acid sphingomyelinase-like phosphodiest... [more]
gi|1069478763|ref|XP_018126782.1|9.850e-2227.74hypothetical protein VE01_09028 [Pseudogymnoascus ... [more]
gi|682452766|gb|KFZ11720.1|1.030e-2127.74hypothetical protein V501_04593 [Pseudogymnoascus ... [more]
gi|1040518063|gb|OBT57112.1|1.048e-2127.74hypothetical protein VE04_03270 [Pseudogymnoascus ... [more]
gi|1176085702|ref|XP_020613115.1|1.210e-2126.95acid sphingomyelinase-like phosphodiesterase 3a [O... [more]
gi|544210984|ref|XP_005535892.1|2.004e-2128.41similar to lysosomal sphingomyelin phosphodiestera... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5123rna5123Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications