EWM25603.1, cds5070 (CDS) Nannochloropsis gaditana

Overview
NameEWM25603.1
Unique Namecds5070
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:73883..74647 -

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Properties
Property NameValue
Protein idEWM25603.1
ProductAnkyrin repeat-containing domain protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100701g1.5190.mrna
GbkeyCDS
End range.
End range74647
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:73883..74647 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
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BLAST of EWM25603.1 vs. NCBI_GenBank
Match: gi|585107413|gb|EWM25603.1| (Ankyrin repeat-containing domain protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 504.597 bits (1298), Expect = 1.546e-180
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 
Query:    1 SFPPPFPSSGEYPGWSATHTAAEKGDVSSLRSLLQSLPPSLLPSLVTGPGPGGVRPLMLSVRTGHVGVVKILLQLGKEACRARDEVGRHALLEAWERRDVEMIRVLISCFQEERGGKSWGKDEEDEGREEREGDRRGEKTLPAPSLNDLHWRSGQGLIHDAVREGWREVLKELIAMGRKGSKNIVDINLRSGGMGVTGWGWTPMQMAAMKDDKEGGRLLWREEAVREKHRCDLMVRSWVWWRKIGGEEERKKTR 254
            SFPPPFPSSGEYPGWSATHTAAEKGDVSSLRSLLQSLPPSLLPSLVTGPGPGGVRPLMLSVRTGHVGVVKILLQLGKEACRARDEVGRHALLEAWERRDVEMIRVLISCFQEERGGKSWGKDEEDEGREEREGDRRGEKTLPAPSLNDLHWRSGQGLIHDAVREGWREVLKELIAMGRKGSKNIVDINLRSGGMGVTGWGWTPMQMAAMKDDKEGGRLLWREEAVREKHRCDLMVRSWVWWRKIGGEEERKKTR
Sbjct:    1 SFPPPFPSSGEYPGWSATHTAAEKGDVSSLRSLLQSLPPSLLPSLVTGPGPGGVRPLMLSVRTGHVGVVKILLQLGKEACRARDEVGRHALLEAWERRDVEMIRVLISCFQEERGGKSWGKDEEDEGREEREGDRRGEKTLPAPSLNDLHWRSGQGLIHDAVREGWREVLKELIAMGRKGSKNIVDINLRSGGMGVTGWGWTPMQMAAMKDDKEGGRLLWREEAVREKHRCDLMVRSWVWWRKIGGEEERKKTR 254
The following BLAST results are available for this feature:
BLAST of EWM25603.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107413|gb|EWM25603.1|1.546e-180100.00Ankyrin repeat-containing domain protein, partial ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5082rna5082Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications