EWM25609.1, cds5063 (CDS) Nannochloropsis gaditana

Overview
NameEWM25609.1
Unique Namecds5063
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:48957..49097 -
Alignment locationCM002465.1:48811..48853 -
Alignment locationCM002465.1:48523..48585 -
Alignment locationCM002465.1:45953..48204 -

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Properties
Property NameValue
Protein idEWM25609.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100544g1.3243.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:48957..49097 -
CM002465.1supercontigCM002465.1:48811..48853 -
CM002465.1supercontigCM002465.1:48523..48585 -
CM002465.1supercontigCM002465.1:45953..48204 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25609.1 vs. NCBI_GenBank
Match: gi|585107426|gb|EWM25609.1| (hypothetical protein Naga_100544g1 [Nannochloropsis gaditana])

HSP 1 Score: 1615.51 bits (4182), Expect = 0.000e+0
Identity = 832/832 (100.00%), Postives = 832/832 (100.00%), Query Frame = 0 
Query:    1 MADSDFTCLNFEEVIIPWLEWLKRTGRARAPKTRNLYRQYVTDLTLQVAMDNLHDEDLPCLGREAVEGFAVENESHLAALAADQSQAGYWHAWGHFWHWLQGDARREGPCASEPQGGGEIGGEGGEEEEGRKGQWAGGTAAEENKRDDMGGKVDEEKRMDTDTALDVKVEEGTDKEAKEEQKGREREAGPGTPQKPCTPQPSSPSSSSTCSSRTASPFSYIHSPSTTPHHLAPLPLFTDRLAHSERQPSPSPFRMGEFDGERKEGRPWLETKRKRGGMAGRISGEEEKNGAKKEKVSERGWARRGEKEGMAEGVREGGEEAEGNEAMWIRALQASFIGYLGGVGVTSKRAQTQYTEAVTRLVAKVVKALRGGVVGRKGGKKQRIKKMEERAGVRVSPAVGLRRFLCRHMDVVEGMMGREEEEEGRMAHEVMIKLYDFIMSAEEEMEEEKEVWRRKKKEEEKRKEEADVEEEEEKEGEEELEEEGSEGRESRGGAPTDVVRKGLDSFMQPSCSLTPTTWPLLPLSMARKAMRREGGEERGRSRPRGVKREEEGGIAREGMKDGAKDVKEGEERQNGIALGGGWEALEEEEEGEEEEEEEEEGDEGGEEEGGKEEEEMEEEGELGLSPVVFGELVHLMATGMRKGTGGGGRGGGGGGGGGGGGGGGEGREWGVTKYAHSEAWKWAMAIDDGVRRMQEERGEEEEGGERGWKRTMGKRRLRSLLEGGMRKEGGKEGWREGLYARMVESQGGDGERAFEKLLVFLGQKDGQNRWKGGGKERVGRAVVGKVREKRRRGWEGAAKGRQRGGVEGGGSMRSWEGGSPDVLRGDMAGRRT 832
            MADSDFTCLNFEEVIIPWLEWLKRTGRARAPKTRNLYRQYVTDLTLQVAMDNLHDEDLPCLGREAVEGFAVENESHLAALAADQSQAGYWHAWGHFWHWLQGDARREGPCASEPQGGGEIGGEGGEEEEGRKGQWAGGTAAEENKRDDMGGKVDEEKRMDTDTALDVKVEEGTDKEAKEEQKGREREAGPGTPQKPCTPQPSSPSSSSTCSSRTASPFSYIHSPSTTPHHLAPLPLFTDRLAHSERQPSPSPFRMGEFDGERKEGRPWLETKRKRGGMAGRISGEEEKNGAKKEKVSERGWARRGEKEGMAEGVREGGEEAEGNEAMWIRALQASFIGYLGGVGVTSKRAQTQYTEAVTRLVAKVVKALRGGVVGRKGGKKQRIKKMEERAGVRVSPAVGLRRFLCRHMDVVEGMMGREEEEEGRMAHEVMIKLYDFIMSAEEEMEEEKEVWRRKKKEEEKRKEEADVEEEEEKEGEEELEEEGSEGRESRGGAPTDVVRKGLDSFMQPSCSLTPTTWPLLPLSMARKAMRREGGEERGRSRPRGVKREEEGGIAREGMKDGAKDVKEGEERQNGIALGGGWEALEEEEEGEEEEEEEEEGDEGGEEEGGKEEEEMEEEGELGLSPVVFGELVHLMATGMRKGTGGGGRGGGGGGGGGGGGGGGEGREWGVTKYAHSEAWKWAMAIDDGVRRMQEERGEEEEGGERGWKRTMGKRRLRSLLEGGMRKEGGKEGWREGLYARMVESQGGDGERAFEKLLVFLGQKDGQNRWKGGGKERVGRAVVGKVREKRRRGWEGAAKGRQRGGVEGGGSMRSWEGGSPDVLRGDMAGRRT
Sbjct:    1 MADSDFTCLNFEEVIIPWLEWLKRTGRARAPKTRNLYRQYVTDLTLQVAMDNLHDEDLPCLGREAVEGFAVENESHLAALAADQSQAGYWHAWGHFWHWLQGDARREGPCASEPQGGGEIGGEGGEEEEGRKGQWAGGTAAEENKRDDMGGKVDEEKRMDTDTALDVKVEEGTDKEAKEEQKGREREAGPGTPQKPCTPQPSSPSSSSTCSSRTASPFSYIHSPSTTPHHLAPLPLFTDRLAHSERQPSPSPFRMGEFDGERKEGRPWLETKRKRGGMAGRISGEEEKNGAKKEKVSERGWARRGEKEGMAEGVREGGEEAEGNEAMWIRALQASFIGYLGGVGVTSKRAQTQYTEAVTRLVAKVVKALRGGVVGRKGGKKQRIKKMEERAGVRVSPAVGLRRFLCRHMDVVEGMMGREEEEEGRMAHEVMIKLYDFIMSAEEEMEEEKEVWRRKKKEEEKRKEEADVEEEEEKEGEEELEEEGSEGRESRGGAPTDVVRKGLDSFMQPSCSLTPTTWPLLPLSMARKAMRREGGEERGRSRPRGVKREEEGGIAREGMKDGAKDVKEGEERQNGIALGGGWEALEEEEEGEEEEEEEEEGDEGGEEEGGKEEEEMEEEGELGLSPVVFGELVHLMATGMRKGTGGGGRGGGGGGGGGGGGGGGEGREWGVTKYAHSEAWKWAMAIDDGVRRMQEERGEEEEGGERGWKRTMGKRRLRSLLEGGMRKEGGKEGWREGLYARMVESQGGDGERAFEKLLVFLGQKDGQNRWKGGGKERVGRAVVGKVREKRRRGWEGAAKGRQRGGVEGGGSMRSWEGGSPDVLRGDMAGRRT 832
[Close]
BLAST of EWM25609.1 vs. NCBI_GenBank
Match: gi|553191469|ref|XP_005855384.1| (hypothetical protein NGA_0077300 [Nannochloropsis gaditana CCMP526] >gi|422293683|gb|EKU20983.1| hypothetical protein NGA_0077300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 469.544 bits (1207), Expect = 2.606e-156
Identity = 283/292 (96.92%), Postives = 287/292 (98.29%), Query Frame = 0 
Query:   50 MDNLHDEDLPCLGREAVEGFAVENESHLAALAADQSQAGYWHAWGHFWHWLQGDARREGPCASEPQGGGEIGGEGGEEEEGRKGQWAGGTAAEENKRDDMGGKVDEEKRMDTDTALDVKVEEGTDKEAKEEQKGREREAGPGTPQKPCTPQPSSPSSSSTCSSRTASPFSYIHSPSTTPHHLAPLPLFTDRLAHSERQPSPSPFRMGEFDGERKEGRPWLETKRKRGGMAGRISGEEEKNGAKKEKVSERGWARRGEKEGMAEGVREGGEEAEGNEAMWIRALQASFIGYLG 341
            MDNLHDEDLPCLGREAVEGFAVENESHLAALAADQSQAGYWHAWGHFWHWL+GDARREGPCASEPQGGGEIGGE GEEEEGRKGQWAGGTAAEENKRDDMGGKVDEEKRMDTDTALD+KVEEGTDKEAKEEQKGREREAGPGTPQKPCTP PSSPSSSSTCSSRTASPFSY HS STTPHHLAPLPLFTDRLAHSERQPSPSPFRMGEF+GERKEGRPWLET+RKRGGMAGRISGEEEKNGAKKEKVSERGWARRGEKEGMAEGVREGGEEAEGNEAMW RALQASFIGYLG
Sbjct:    1 MDNLHDEDLPCLGREAVEGFAVENESHLAALAADQSQAGYWHAWGHFWHWLRGDARREGPCASEPQGGGEIGGEEGEEEEGRKGQWAGGTAAEENKRDDMGGKVDEEKRMDTDTALDMKVEEGTDKEAKEEQKGREREAGPGTPQKPCTPLPSSPSSSSTCSSRTASPFSYNHSSSTTPHHLAPLPLFTDRLAHSERQPSPSPFRMGEFEGERKEGRPWLETRRKRGGMAGRISGEEEKNGAKKEKVSERGWARRGEKEGMAEGVREGGEEAEGNEAMWARALQASFIGYLG 292
The following BLAST results are available for this feature:
BLAST of EWM25609.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107426|gb|EWM25609.1|0.000e+0100.00hypothetical protein Naga_100544g1 [Nannochloropsi... [more]
gi|553191469|ref|XP_005855384.1|2.606e-15696.92hypothetical protein NGA_0077300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5075rna5075Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications