EWM25611.1, cds5060 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|585107430|gb|EWM25611.1| (origin recognition complex subunit 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 SLPPSSSTSASSRGGLYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 335
SLPPSSSTSASSRGGLYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR
Sbjct: 1 SLPPSSSTSASSRGGLYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 335
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|553191438|ref|XP_005855377.1| (origin recognition complex subunit 1 [Nannochloropsis gaditana CCMP526] >gi|422293676|gb|EKU20976.1| origin recognition complex subunit 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 429.098 bits (1102), Expect = 1.690e-148 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query: 125 MDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 335
MDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR
Sbjct: 1 MDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESGR 211
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|551554631|ref|XP_005764548.1| (hypothetical protein EMIHUDRAFT_104391 [Emiliania huxleyi CCMP1516] >gi|485614263|gb|EOD12119.1| hypothetical protein EMIHUDRAFT_104391 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 186.422 bits (472), Expect = 1.040e-49 Identity = 115/244 (47.13%), Postives = 142/244 (58.20%), Query Frame = 0
Query: 9 SASSRGG----LYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRR 248
SA S GG LYI+G PGTGKTATVHH L L ER F E+NG+ LS+P Q YSLLW LT Q S ARA L F+ PS R A VV++LDE+DYLV T VIYN EW G L L+G+SNT+DLPER++ PRV SRL +RRV F PYSH ++A+I+ RL GL + + +++C+RKVA VSGD+R+A +VCR A L R
Sbjct: 378 SAISGGGKGTSLYISGTPGTGKTATVHHALRLLAAERGLPPFRTLEVNGMKLSSPQQVYSLLWEGLTGQH---ASVARAQQLLDKRFSAPSKKRRCG-------------AEVVVLLLDELDYLV-----TRTQSVIYNLFEWATSGHA---PLALIGISNTMDLPERLL-PRVHSRLGIRRVSFLPYSHSEIAAIIADRLTGL--DAFEPKGVELCARKVAAVSGDIRRALEVCRLAAQLAER 594
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|922852759|gb|KOO21425.1| (origin recognition complex subunit 1 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 184.882 bits (468), Expect = 1.083e-49 Identity = 118/299 (39.46%), Postives = 169/299 (56.52%), Query Frame = 0
Query: 14 GGLYIAGFPGTGKTATVHHVLSRLRRERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQ 312
G LYI+G PGTGKTATVH L L +R L F +NG+ +S P Q Y+LLW LT Q A+ P+RAL L F P+++ S S ++ R+ + V+++LDE+DYLV T V+YN EW + L+++G+SNT+DLPER++ PRV+SRL++RRV F PY + SI+ RLG L D +++C+RKVA+V+GD+R+A +VCR A + + R + A E EGG GA R+ V IA I +A ++L+ + AVQ
Sbjct: 261 GSLYISGTPGTGKTATVHQALRELTADR-TLQFRSIFVNGMKMSTPFQVYALLWEGLTGQ---AVKPSRALELLERRFAAPTTSRLSF--SKAVQQRRKGASEKVILILDELDYLV-----TSRQSVLYNLFEWSTRANAA---LVVVGISNTMDLPERLL-PRVESRLNIRRVNFHPYDRSALESIITDRLGTLDAFAAGDGGLELCARKVASVTGDVRRALEVCRLATQI--------AEREEAAAHSERASEGGK-----GAARQAPTH----VTIAHIEEAHKQLRGSALLLAVQ 527
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|1132455348|gb|OLY81679.1| (Origin recognition complex subunit 1 [Smittium mucronatum]) HSP 1 Score: 172.17 bits (435), Expect = 3.693e-45 Identity = 105/311 (33.76%), Postives = 164/311 (52.73%), Query Frame = 0
Query: 16 LYIAGFPGTGKTATVHHVLSR--LRRERRDL-GFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVL 323
LYI+G PGTGKTATV+ V+ L E DL F EING+ L+ P Q Y LW +T + L+PA A L D+FT PSS S P +V +DE+D LV KS ++YN +W + LI++ ++NT+DLPER++Q ++ SRL L+R+ F PYSH Q+ I+ +R+G + D +Q+CSRK+ VSGD R+A VCR A+++ + S+ P+S + + G D+ ++ + + +V + +I+Q RE+ +Q ++ ++
Sbjct: 235 LYISGVPGTGKTATVYEVIRMISLSCESGDLPNFEFIEINGMKLTEPQQLYVQLWKGITGN-QTKLTPAHAALMLNDYFTKPSSGKGSQPMK--------------IVFVDELDVLVTKS-----QSIMYNLFDWPTRSNSN---LIVITVANTMDLPERMLQHKISSRLGLKRINFMPYSHEQLTKIVSSRIGD--NSIFDQDAVQLCSRKIGAVSGDARRALDVCRRAVEIVQT-----SLEPNSNSQFKSHG-----------DKSDLNKSQ-VVTMKIIDQVIREMYSYGFIPIIQNASFHQKIFLI 503
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|915192031|ref|XP_013321210.1| (hypothetical protein PV05_00828 [Exophiala xenobiotica] >gi|759284124|gb|KIW60626.1| hypothetical protein PV05_00828 [Exophiala xenobiotica]) HSP 1 Score: 172.17 bits (435), Expect = 1.539e-44 Identity = 116/323 (35.91%), Postives = 170/323 (52.63%), Query Frame = 0
Query: 16 LYIAGFPGTGKTATVHHVLSRLRR-----ERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPA--SSPGADRKEVEERKPL--VDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRS 329
+YI+G PGTGKTATV V++ L + E D F EING+ ++ P Q+YSLLW AL R +SP ALS L F+ PS R P VV++DE+D LV T V+YNF W A LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+ +RL G+ ++D +Q S+KVA VSGD R+A +CR A+++ + V +S A EE G P+ + AD +E ++ K L V IA I QA E P+ + ++ +++ + ++ RS
Sbjct: 358 IYISGTPGTGKTATVREVVTSLHQAVLNDELDDFNF--VEINGMKVTEPHQSYSLLWEALKGDR---VSPNHALSLLEQEFSHPSP-----------------RRIPCVVLMDELDQLV-----TRNQSVMYNFFNWPAMRHSR---LIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHTQLMEIISSRLEGVAGNIVDKDAVQFASQKVAAVSGDARRALDICRRAVEIAEQSQEKKDV--ASDADAEEVA-AGTPSRKNRSKADIQETDKTKRLARVTIATIRQAINEATSSPVAQHLKSVPLSSKLFLAALLARS 647
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|915044291|ref|XP_013256679.1| (origin recognition complex subunit 1 [Exophiala aquamarina CBS 119918] >gi|656908354|gb|KEF54089.1| origin recognition complex subunit 1 [Exophiala aquamarina CBS 119918]) HSP 1 Score: 171.785 bits (434), Expect = 1.934e-44 Identity = 120/338 (35.50%), Postives = 171/338 (50.59%), Query Frame = 0
Query: 6 SSTSASSRGGLYIAGFPGTGKTATVHHVLSRLRRERRDL---GFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGA--DRKEV----------EERKPLVDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIR 328
S+ + S +YI+G PGTGKTATV V+ L + D F EING+ ++ P Q+YSLLW AL R +SP ALS L F+ PS R P VV++DE+D LV K+ V+YNF W A LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+ +RL G+ ++D IQ SRKVA VSGD R+A +CR A++L + S P S TG+ P+S+ + R E E+R P V IA I QA E P+ + ++ +++ + V+ R
Sbjct: 346 SAIADGSGACIYISGTPGTGKTATVREVVGSLHQAVLDEELDDFNFIEINGMKVTEPHQSYSLLWEALKGDR---VSPNHALSLLEQEFSHPSP-----------------RRIPCVVLMDELDQLVTKN-----QSVMYNFFNWPAMR---HSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHTQLMEIISSRLAGVPGNIVDQDAIQFASRKVAAVSGDARRALDICRRAVELTEQ--SQPKSELS-------TGDEDEPSSNTPSRKGRNEAKQHENEAVGGEKRLPRVTIATIKQAINEATSSPLAQHLRSVSLSSKLFLAAVLAR 646
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|628231061|ref|XP_007721987.1| (origin recognition complex subunit 1 [Capronia coronata CBS 617.96] >gi|590019294|gb|EXJ94493.1| origin recognition complex subunit 1 [Capronia coronata CBS 617.96]) HSP 1 Score: 171.785 bits (434), Expect = 2.633e-44 Identity = 124/338 (36.69%), Postives = 174/338 (51.48%), Query Frame = 0
Query: 16 LYIAGFPGTGKTATVHHVLSRLRR----ERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALE-ETGEGGAPASSP-----GADR-------KEVEERKPL--VDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRSTVESG 334
+YI+G PGTGKTATV V+ L + E D F EING+ ++ P Q+YSLLW AL R +SP ALS L F+ PS R P VV++DE+D LV KS V+YNF W A LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+ +RL G+ ++D +Q SRKVA VSGD R+A +CR A+++ + S + + A E + + AS+P GA + +E + KPL V IA I QA E PI + ++ L+ A L L I+ T +G
Sbjct: 361 IYISGTPGTGKTATVREVVGALHQAVLSEELD-DFNFVEINGMKVTEPHQSYSLLWEALKGDR---VSPNHALSLLEQEFSHPSP-----------------RRIPCVVLMDELDQLVTKS-----QSVMYNFFNWPAMRHSR---LIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHTQLMEIISSRLEGVPGNIVDQDAVQFASRKVAAVSGDARRALDICRRAVEIAEQ-----SQQTQNTATTETDNDDASISASTPSRKGRGATKDLSNTKPEESDASKPLPRVTIATIKQAINEATSSPIAQHLR-SLSLASKLFLAAILARTRRTG 663
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|440488975|gb|ELQ68658.1| (origin recognition complex subunit 1, partial [Magnaporthe oryzae P131]) HSP 1 Score: 169.474 bits (428), Expect = 3.824e-44 Identity = 101/234 (43.16%), Postives = 138/234 (58.97%), Query Frame = 0
Query: 16 LYIAGFPGTGKTATVHHVLSRLRRERRDL---GFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRG-LILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDL 245
+YI+G PGTGKTATV V++ L R+ F EING+ +S+P QAYSLLW AL QR +SPA+AL L F+ PS R P VV++DE+D LV K+ +G V+YNF W G R LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+++RL G+ ++D IQ SRKVA VSGD R+A +CR A++L
Sbjct: 202 IYISGTPGTGKTATVREVVASLDHAVRNDELDDFIFVEINGMKVSDPHQAYSLLWEALKGQR---VSPAQALDLLEREFSNPSP-----------------RRVPCVVLMDELDQLVTKN----QG-VMYNFFNW----PGLRHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHEQLMKIIQSRLEGVPGNIVDPDAIQFASRKVAAVSGDARRALDICRRAVEL 406
BLAST of EWM25611.1 vs. NCBI_GenBank
Match: gi|1022821828|ref|XP_016232153.1| (hypothetical protein PV08_09210 [Exophiala spinifera] >gi|759234989|gb|KIW11937.1| hypothetical protein PV08_09210 [Exophiala spinifera]) HSP 1 Score: 171.014 bits (432), Expect = 4.026e-44 Identity = 114/325 (35.08%), Postives = 169/325 (52.00%), Query Frame = 0
Query: 12 SRGGLYIAGFPGTGKTATVHHVLSRLRR-----ERRDLGFTHCEINGLTLSNPTQAYSLLWAALTDQREAALSPARALSKLADFFTGPSSTVRSTPSSASLSTSRQRRARPVVVVLDEMDYLVGKSLHTMEGKVIYNFLEWGAGGDGGRRGLILLGLSNTVDLPERVMQPRVQSRLSLRRVRFEPYSHLQVASILRTRLGGLVPQVIDDQCIQMCSRKVANVSGDLRKAFQVCRYAIDLKRRFLSSPSVRPSSLAALEETGEGGAPASSPGADRKEVEERKPL--VDIALINQAARELQEKPIFRAVQEGLTDAQVLVLIVIIRS 329
S G +YI+G PGTGKTATV V++ L + E D F EING+ ++ P Q+YSLLW AL R +SP ALS L F+ PS R P VV++DE+D LV T V+YNF W A LI+L ++NT+DLPER + ++ SRL L R+ F Y+H Q+ I+ +RL G+ ++D +Q S+KVA VSGD R+A +CR A+++ ++ ++ A E G P S G + + E +P+ V IA I QA E P+ + ++ +++ + ++ RS
Sbjct: 354 SGGCIYISGTPGTGKTATVRDVVTSLHQAVLNDELDDFNF--VEINGMKVTEPHQSYSLLWEALKGDR---VSPNHALSLLEQEFSHPSP-----------------RRIPCVVLMDELDQLV-----TRNQSVMYNFFNWPAMR---HSKLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHTQLMEIISSRLEGVPGNIVDKDAVQFASQKVAAVSGDARRALDICRRAVEIAE---NTHERNNATAQANNEDTSAGTP-SRKGKGQPDSEGSRPMARVTIATIRQAINEATSSPVAQHLRSLPLSSKLFLAALLARS 644 The following BLAST results are available for this feature:
BLAST of EWM25611.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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