EWM25650.1, cds5029 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|585107478|gb|EWM25650.1| (ccr4-associated factor [Nannochloropsis gaditana]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 Query: 1 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD 365 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD Sbjct: 1 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD 365
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|553188481|ref|XP_005854806.1| (CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526] >gi|422294255|gb|EKU21555.1| CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 756.133 bits (1951), Expect = 0.000e+0 Identity = 362/365 (99.18%), Postives = 363/365 (99.45%), Query Frame = 0 Query: 1 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD 365 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTD GDSVST QSISSTSGPRR+GTEAAATSPSAGTGTGGNGDANAMSD Sbjct: 154 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDSGDSVSTSQSISSTSGPRRVGTEAAATSPSAGTGTGGNGDANAMSD 518
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|672826746|gb|KFH71636.1| (hypothetical protein MVEG_01932 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 371.318 bits (952), Expect = 3.844e-125 Identity = 166/259 (64.09%), Postives = 216/259 (83.40%), Query Frame = 0 Query: 30 GKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLG 287 +R IREVW ENLD+EM +R++V+QYPY+AMDTEFPGVVARP+G+ +++DY Y+TL+CNVDLLK+IQLG++FAD +GN P + TWQFNF+F+L+DD+YA+DSI+LL++SGI+F KHE +GIDV FGELL++SG VL+DEV+WISFHSGYDFGYLLK+LTC+ LP++E FFDLLRTYFPC YDIKYLM +C+ L GGLQ +A +L V R+GP HQAGSDSLLT TFF++ + F+ + + D K+ G L+GLG Sbjct: 5 NERAIIREVWAENLDQEMALLRDLVDQYPYLAMDTEFPGVVARPIGNFRTSADYHYQTLRCNVDLLKMIQLGVTFADENGNVPKDACTWQFNFKFNLADDMYAQDSIDLLQKSGINFQKHEDYGIDVHHFGELLISSGFVLLDEVKWISFHSGYDFGYLLKILTCSPLPAEEGDFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQELANDLQVVRIGPQHQAGSDSLLTCSTFFKMRQIFFE--DKIDDAKYLGYLYGLG 261
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|676379739|ref|XP_009033148.1| (hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens] >gi|323456185|gb|EGB12052.1| hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens]) HSP 1 Score: 372.474 bits (955), Expect = 6.352e-125 Identity = 171/277 (61.73%), Postives = 217/277 (78.34%), Query Frame = 0 Query: 24 IYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPE-CPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQN 299 + +DGK +EI++VW LD EM +RE+VE YPYVAMDTEFPGVVA+P+GD ++ YQY+TL+CNVDLLKIIQLG+SF D +G +P E C +QFNFRF L++D+YAEDSI+LLK+SGIDF +H + GIDV RFGEL+M SGLVL D+V+W+SFHSGYDFGYL+K+LTC LP+DE GFF+LL YFP YD+K LMT GLHGGLQR+AE+L V R+GPMHQAGSDS+LT TFFRL ++F + +EK++G ++GLG + YR K Sbjct: 44 FFPDKDGKMVEIKDVWASTLDAEMAVIRELVESYPYVAMDTEFPGVVAKPIGDAYSTGYQYQTLQCNVDLLKIIQLGISFCDGEGKTPEEGCYCFQFNFRFDLAEDMYAEDSIQLLKESGIDFHRHATEGIDVARFGELVMMSGLVLCDDVKWVSFHSGYDFGYLIKILTCQTLPADEQGFFELLALYFPTLYDVKLLMTHVDGLHGGLQRVAEDLKVERIGPMHQAGSDSMLTNATFFRLAELAFSSPEKV-EEKYRGAIYGLGEH--AYRGKQHQ 317
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|727154057|emb|CEG62914.1| (Putative CCR4-NOT transcription complex subunit 7 [Rhizopus microsporus]) HSP 1 Score: 369.392 bits (947), Expect = 1.051e-124 Identity = 171/267 (64.04%), Postives = 218/267 (81.65%), Query Frame = 0 Query: 35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGL-----GHNHTVYRS 295 I+EVW ENL++EM +R++VE YPY+AMDTEFPGVVARP+G ++SDY Y+TL+CNVDLLKIIQLG++FAD GN P TWQFNF+FSL+DD+YA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTC+ +P+DE+ FFDLLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT TFF++ + F+ + + D+K+ G L+GL N+T+ +S Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNSNNTIMKS 273
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|1043304527|gb|OBZ89232.1| (CCR4-NOT transcription complex subunit 7 [Choanephora cucurbitarum]) HSP 1 Score: 369.777 bits (948), Expect = 1.601e-124 Identity = 171/269 (63.57%), Postives = 217/269 (80.67%), Query Frame = 0 Query: 35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLG----HNHTVYRSKMQ 298 I+EVW ENL++EM +R++VE YPY+AMDTEFPGVVARP+G ++SDY Y+TL+CNVDLLKIIQLG++FAD GN P TWQFNF+F+L+DD+YA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+D+V+WISFHSGYDFGYLLKVLTC+ +P+DE FF+LLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT TFF++ + F+ + + D+K+ G L+GL H HT + +Q Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSLMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGLKCSPQHTHTTHHQALQ 275
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|1178068010|gb|ORE22406.1| (CAF1-domain-containing protein [Rhizopus microsporus]) HSP 1 Score: 368.622 bits (945), Expect = 2.902e-124 Identity = 171/267 (64.04%), Postives = 218/267 (81.65%), Query Frame = 0 Query: 35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGL-----GHNHTVYRS 295 I+EVW ENL++EM +R++VE YPY+AMDTEFPGVVARP+G ++SDY Y+TL+CNVDLLKIIQLG++FAD GN P TWQFNF+FSL+DD+YA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTC+ +P+DE+ FFDLLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT TFF++ + F+ + + D+K+ G L+GL +N+T +S Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNNNNTTMKS 273
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|1183475422|gb|ORY99279.1| (ribonuclease H-like domain-containing protein [Syncephalastrum racemosum]) HSP 1 Score: 367.081 bits (941), Expect = 1.846e-123 Identity = 171/269 (63.57%), Postives = 222/269 (82.53%), Query Frame = 0 Query: 35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHN-HTVYRSKMQNTN 301 I+EVW +NL++EM +R++VE++PY+AMDTEFPGVVARP+G ++SDY Y+TL+CNVDLLKIIQLG++FAD GN P TWQFNF+F+LSDD+YA+DSIELL +SGIDF +HE GIDV FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTC+++P+DE+ FFDLLR YFPC YDIKYLM +C+ L GGLQ IA++L V+R+GP HQAGSDSLLT TFF++ AV FD + + D+K+ G LFGL ++ + +S +Q TN Sbjct: 9 IKEVWADNLEEEMEYLRDLVEEFPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDLLKIIQLGVTFADEHGNLPRNVCTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKRHEEDGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKLLTCSSMPADESEFFDLLRIYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVSRIGPQHQAGSDSLLTCSTFFKMRAVFFD--DRIDDQKYLGYLFGLKNSTSSSVQSLVQATN 275
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|758363786|emb|CEP13830.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 366.311 bits (939), Expect = 2.968e-123 Identity = 168/253 (66.40%), Postives = 212/253 (83.79%), Query Frame = 0 Query: 35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGL 286 I+EVW ENL++EM +R++VE+YPY+AMDTEFPGVVARP+G ++SDY Y+TL+CNVDLLKIIQLG++FAD GN P TWQFNF+F+LSDD+YA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+D+V+WISFHSGYDFGYLLKVLTC+ +P+DE FF+LLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT TFF++ + F+ + + D+K+ G L+GL Sbjct: 9 IKEVWAENLEEEMAYLRDLVEEYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSVMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGL 259
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|661183241|emb|CDH54244.1| (ccr4-not transcription complex subunit 7 [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 365.925 bits (938), Expect = 4.036e-123 Identity = 175/289 (60.55%), Postives = 225/289 (77.85%), Query Frame = 0 Query: 35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGD 322 I+EVW ENL++EM +R++VE+YPY+AMDTEFPGVVARP+G ++SDY Y+TL+CNVD+LKIIQLG++FAD GN P TWQFNF+FSLS+D+YA+DSIELL +SGIDF KHE HGIDV FGELL++SG VL+++V+WISFHSGYDFGYLLK+LTC+ +P+DE FF++LR YFPC YDIKYLM +C+ L GGLQ IA++L VARVGP HQAGSDSLLT TFF++ + FD + + D+K+ G L+GL + + +S Q T+ L P +TD GD Sbjct: 9 IKEVWSENLEEEMAHLRDLVEEYPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDVLKIIQLGITFADEHGNIPRNICTWQFNFKFSLSEDMYAQDSIELLTKSGIDFKKHEEHGIDVEHFGELLISSGFVLLEDVKWISFHSGYDFGYLLKLLTCSPMPADETEFFEILRLYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVARVGPQHQAGSDSLLTCTTFFKMRQMFFD--DRIDDQKYLGYLYGLRSSPSAVQSLTQATSN---MSLNSNNNSPTITDSGD 292 The following BLAST results are available for this feature:
BLAST of EWM25650.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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