EWM25650.1, cds5029 (CDS) Nannochloropsis gaditana

Overview
NameEWM25650.1
Unique Namecds5029
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:1027792..1027828 -
Alignment locationCM002464.1:1027556..1027674 -
Alignment locationCM002464.1:1027252..1027380 -
Alignment locationCM002464.1:1026878..1027039 -
Alignment locationCM002464.1:1026592..1026749 -
Alignment locationCM002464.1:1026317..1026414 -
Alignment locationCM002464.1:1026002..1026152 -
Alignment locationCM002464.1:1025720..1025784 -
Alignment locationCM002464.1:1025430..1025534 -
Alignment locationCM002464.1:1025217..1025290 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25650.1
Productccr4-associated factor
Orig transcript idgnl|cribi|Naga_100037g9.10739.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:1027792..1027828 -
CM002464.1supercontigCM002464.1:1027556..1027674 -
CM002464.1supercontigCM002464.1:1027252..1027380 -
CM002464.1supercontigCM002464.1:1026878..1027039 -
CM002464.1supercontigCM002464.1:1026592..1026749 -
CM002464.1supercontigCM002464.1:1026317..1026414 -
CM002464.1supercontigCM002464.1:1026002..1026152 -
CM002464.1supercontigCM002464.1:1025720..1025784 -
CM002464.1supercontigCM002464.1:1025430..1025534 -
CM002464.1supercontigCM002464.1:1025217..1025290 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_dom
Homology
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|585107478|gb|EWM25650.1| (ccr4-associated factor [Nannochloropsis gaditana])

HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
Query:    1 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD 365
            MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD
Sbjct:    1 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD 365          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|553188481|ref|XP_005854806.1| (CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526] >gi|422294255|gb|EKU21555.1| CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 756.133 bits (1951), Expect = 0.000e+0
Identity = 362/365 (99.18%), Postives = 363/365 (99.45%), Query Frame = 0
Query:    1 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGDSVSTPQSISSTSGPRRLGTEAAATSPSAGTGTGGNGDANAMSD 365
            MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTD GDSVST QSISSTSGPRR+GTEAAATSPSAGTGTGGNGDANAMSD
Sbjct:  154 MNGGPQSSAEEKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDSGDSVSTSQSISSTSGPRRVGTEAAATSPSAGTGTGGNGDANAMSD 518          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|672826746|gb|KFH71636.1| (hypothetical protein MVEG_01932 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 371.318 bits (952), Expect = 3.844e-125
Identity = 166/259 (64.09%), Postives = 216/259 (83.40%), Query Frame = 0
Query:   30 GKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLG 287
             +R  IREVW ENLD+EM  +R++V+QYPY+AMDTEFPGVVARP+G+  +++DY Y+TL+CNVDLLK+IQLG++FAD +GN P +  TWQFNF+F+L+DD+YA+DSI+LL++SGI+F KHE +GIDV  FGELL++SG VL+DEV+WISFHSGYDFGYLLK+LTC+ LP++E  FFDLLRTYFPC YDIKYLM +C+ L GGLQ +A +L V R+GP HQAGSDSLLT  TFF++  + F+  + + D K+ G L+GLG
Sbjct:    5 NERAIIREVWAENLDQEMALLRDLVDQYPYLAMDTEFPGVVARPIGNFRTSADYHYQTLRCNVDLLKMIQLGVTFADENGNVPKDACTWQFNFKFNLADDMYAQDSIDLLQKSGINFQKHEDYGIDVHHFGELLISSGFVLLDEVKWISFHSGYDFGYLLKILTCSPLPAEEGDFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQELANDLQVVRIGPQHQAGSDSLLTCSTFFKMRQIFFE--DKIDDAKYLGYLYGLG 261          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|676379739|ref|XP_009033148.1| (hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens] >gi|323456185|gb|EGB12052.1| hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens])

HSP 1 Score: 372.474 bits (955), Expect = 6.352e-125
Identity = 171/277 (61.73%), Postives = 217/277 (78.34%), Query Frame = 0
Query:   24 IYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPE-CPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQN 299
             +  +DGK +EI++VW   LD EM  +RE+VE YPYVAMDTEFPGVVA+P+GD  ++ YQY+TL+CNVDLLKIIQLG+SF D +G +P E C  +QFNFRF L++D+YAEDSI+LLK+SGIDF +H + GIDV RFGEL+M SGLVL D+V+W+SFHSGYDFGYL+K+LTC  LP+DE GFF+LL  YFP  YD+K LMT   GLHGGLQR+AE+L V R+GPMHQAGSDS+LT  TFFRL  ++F     + +EK++G ++GLG +   YR K   
Sbjct:   44 FFPDKDGKMVEIKDVWASTLDAEMAVIRELVESYPYVAMDTEFPGVVAKPIGDAYSTGYQYQTLQCNVDLLKIIQLGISFCDGEGKTPEEGCYCFQFNFRFDLAEDMYAEDSIQLLKESGIDFHRHATEGIDVARFGELVMMSGLVLCDDVKWVSFHSGYDFGYLIKILTCQTLPADEQGFFELLALYFPTLYDVKLLMTHVDGLHGGLQRVAEDLKVERIGPMHQAGSDSMLTNATFFRLAELAFSSPEKV-EEKYRGAIYGLGEH--AYRGKQHQ 317          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|727154057|emb|CEG62914.1| (Putative CCR4-NOT transcription complex subunit 7 [Rhizopus microsporus])

HSP 1 Score: 369.392 bits (947), Expect = 1.051e-124
Identity = 171/267 (64.04%), Postives = 218/267 (81.65%), Query Frame = 0
Query:   35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGL-----GHNHTVYRS 295
            I+EVW ENL++EM  +R++VE YPY+AMDTEFPGVVARP+G   ++SDY Y+TL+CNVDLLKIIQLG++FAD  GN P    TWQFNF+FSL+DD+YA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTC+ +P+DE+ FFDLLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT  TFF++  + F+  + + D+K+ G L+GL       N+T+ +S
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNSNNTIMKS 273          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|1043304527|gb|OBZ89232.1| (CCR4-NOT transcription complex subunit 7 [Choanephora cucurbitarum])

HSP 1 Score: 369.777 bits (948), Expect = 1.601e-124
Identity = 171/269 (63.57%), Postives = 217/269 (80.67%), Query Frame = 0
Query:   35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLG----HNHTVYRSKMQ 298
            I+EVW ENL++EM  +R++VE YPY+AMDTEFPGVVARP+G   ++SDY Y+TL+CNVDLLKIIQLG++FAD  GN P    TWQFNF+F+L+DD+YA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+D+V+WISFHSGYDFGYLLKVLTC+ +P+DE  FF+LLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT  TFF++  + F+  + + D+K+ G L+GL     H HT +   +Q
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSLMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGLKCSPQHTHTTHHQALQ 275          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|1178068010|gb|ORE22406.1| (CAF1-domain-containing protein [Rhizopus microsporus])

HSP 1 Score: 368.622 bits (945), Expect = 2.902e-124
Identity = 171/267 (64.04%), Postives = 218/267 (81.65%), Query Frame = 0
Query:   35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGL-----GHNHTVYRS 295
            I+EVW ENL++EM  +R++VE YPY+AMDTEFPGVVARP+G   ++SDY Y+TL+CNVDLLKIIQLG++FAD  GN P    TWQFNF+FSL+DD+YA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTC+ +P+DE+ FFDLLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT  TFF++  + F+  + + D+K+ G L+GL      +N+T  +S
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNNNNTTMKS 273          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|1183475422|gb|ORY99279.1| (ribonuclease H-like domain-containing protein [Syncephalastrum racemosum])

HSP 1 Score: 367.081 bits (941), Expect = 1.846e-123
Identity = 171/269 (63.57%), Postives = 222/269 (82.53%), Query Frame = 0
Query:   35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHN-HTVYRSKMQNTN 301
            I+EVW +NL++EM  +R++VE++PY+AMDTEFPGVVARP+G   ++SDY Y+TL+CNVDLLKIIQLG++FAD  GN P    TWQFNF+F+LSDD+YA+DSIELL +SGIDF +HE  GIDV  FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTC+++P+DE+ FFDLLR YFPC YDIKYLM +C+ L GGLQ IA++L V+R+GP HQAGSDSLLT  TFF++ AV FD  + + D+K+ G LFGL ++  +  +S +Q TN
Sbjct:    9 IKEVWADNLEEEMEYLRDLVEEFPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDLLKIIQLGVTFADEHGNLPRNVCTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKRHEEDGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKLLTCSSMPADESEFFDLLRIYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVSRIGPQHQAGSDSLLTCSTFFKMRAVFFD--DRIDDQKYLGYLFGLKNSTSSSVQSLVQATN 275          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|758363786|emb|CEP13830.1| (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 366.311 bits (939), Expect = 2.968e-123
Identity = 168/253 (66.40%), Postives = 212/253 (83.79%), Query Frame = 0
Query:   35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGL 286
            I+EVW ENL++EM  +R++VE+YPY+AMDTEFPGVVARP+G   ++SDY Y+TL+CNVDLLKIIQLG++FAD  GN P    TWQFNF+F+LSDD+YA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+D+V+WISFHSGYDFGYLLKVLTC+ +P+DE  FF+LLRTYFPC YDIKYLM +C+ L GGLQ IA++L VAR+GP HQAGSDSLLT  TFF++  + F+  + + D+K+ G L+GL
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEEYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSVMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGL 259          
BLAST of EWM25650.1 vs. NCBI_GenBank
Match: gi|661183241|emb|CDH54244.1| (ccr4-not transcription complex subunit 7 [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 365.925 bits (938), Expect = 4.036e-123
Identity = 175/289 (60.55%), Postives = 225/289 (77.85%), Query Frame = 0
Query:   35 IREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDV-SASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHGGLERQREVPPLTDRGD 322
            I+EVW ENL++EM  +R++VE+YPY+AMDTEFPGVVARP+G   ++SDY Y+TL+CNVD+LKIIQLG++FAD  GN P    TWQFNF+FSLS+D+YA+DSIELL +SGIDF KHE HGIDV  FGELL++SG VL+++V+WISFHSGYDFGYLLK+LTC+ +P+DE  FF++LR YFPC YDIKYLM +C+ L GGLQ IA++L VARVGP HQAGSDSLLT  TFF++  + FD  + + D+K+ G L+GL  + +  +S  Q T+      L      P +TD GD
Sbjct:    9 IKEVWSENLEEEMAHLRDLVEEYPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDVLKIIQLGITFADEHGNIPRNICTWQFNFKFSLSEDMYAQDSIELLTKSGIDFKKHEEHGIDVEHFGELLISSGFVLLEDVKWISFHSGYDFGYLLKLLTCSPMPADETEFFEILRLYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVARVGPQHQAGSDSLLTCTTFFKMRQMFFD--DRIDDQKYLGYLYGLRSSPSAVQSLTQATSN---MSLNSNNNSPTITDSGD 292          
The following BLAST results are available for this feature:
BLAST of EWM25650.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107478|gb|EWM25650.1|0.000e+0100.00ccr4-associated factor [Nannochloropsis gaditana][more]
gi|553188481|ref|XP_005854806.1|0.000e+099.18CCR4-NOT transcription complex subunit 7/8 [Nannoc... [more]
gi|672826746|gb|KFH71636.1|3.844e-12564.09hypothetical protein MVEG_01932 [Mortierella verti... [more]
gi|676379739|ref|XP_009033148.1|6.352e-12561.73hypothetical protein AURANDRAFT_52324 [Aureococcus... [more]
gi|727154057|emb|CEG62914.1|1.051e-12464.04Putative CCR4-NOT transcription complex subunit 7 ... [more]
gi|1043304527|gb|OBZ89232.1|1.601e-12463.57CCR4-NOT transcription complex subunit 7 [Choaneph... [more]
gi|1178068010|gb|ORE22406.1|2.902e-12464.04CAF1-domain-containing protein [Rhizopus microspor... [more]
gi|1183475422|gb|ORY99279.1|1.846e-12363.57ribonuclease H-like domain-containing protein [Syn... [more]
gi|758363786|emb|CEP13830.1|2.968e-12366.40hypothetical protein [Parasitella parasitica][more]
gi|661183241|emb|CDH54244.1|4.036e-12360.55ccr4-not transcription complex subunit 7 [Lichthei... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5041rna5041Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications