EWM25641.1, cds5023 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|585107469|gb|EWM25641.1| (augmenter of liver regeneration [Nannochloropsis gaditana]) HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0 Query: 1 MWSKTRSGNASFLSRNGRAGRLAPFGPPLRVPLSFESRRSTMANSLSILILSVFLQFLGSKQVKIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316 MWSKTRSGNASFLSRNGRAGRLAPFGPPLRVPLSFESRRSTMANSLSILILSVFLQFLGSKQVKIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP Sbjct: 1 MWSKTRSGNASFLSRNGRAGRLAPFGPPLRVPLSFESRRSTMANSLSILILSVFLQFLGSKQVKIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|553180430|ref|XP_005853403.1| (augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >gi|553189896|ref|XP_005855096.1| augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >gi|422293966|gb|EKU21266.1| augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >gi|422295658|gb|EKU22957.1| augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 518.079 bits (1333), Expect = 0.000e+0 Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0 Query: 64 KIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316 KIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSML LLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDF+ECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHI SAPSPLTRRKSKFYIIEPGVGKKKTGP Sbjct: 1 KIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLDLLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFEECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHIPSAPSPLTRRKSKFYIIEPGVGKKKTGP 253
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|299471431|emb|CBN79383.1| (Mitochondrial intermembrane space Erv1 homolog [Ectocarpus siliculosus]) HSP 1 Score: 176.792 bits (447), Expect = 3.324e-51 Identity = 92/181 (50.83%), Postives = 116/181 (64.09%), Query Frame = 0 Query: 96 ECEHAACKSMLALLKSA---AGMSKSGATSSSSP------SLASSTPSAASSDEAAW---RKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGE 264 +CE AC M LL+ A +K A S+++ S A + SAA +DE A R + CPLDK LG TWG++H+TAA+YPE P+ + Q A LV G+AGLYPCTYCR DF+E ++ LPP V SR A S+W C+QHNLVNEK+GKP F C L +LD RWK G+P CW E G E Sbjct: 13 DCEDPACADMADLLRKGRALAAKNKQKAASNTATDGKAAGSQAQPSSSAAETDEHAASSSRNDGCPLDKGELGAATWGLIHTTAAHYPEKPSKETQDQARALVTGLAGLYPCTYCRKDFREEVRKLPPDVSSRVALSLWACQQHNLVNEKIGKPTFGCTLPALDERWKKGKPSCW-EGGAE 192
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|325180892|emb|CCA15302.1| (augmenter of liver regeneration putative [Albugo laibachii Nc14]) HSP 1 Score: 162.155 bits (409), Expect = 1.279e-45 Identity = 79/178 (44.38%), Postives = 105/178 (58.99%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGAD 274 C ACKS + L + G K G +SS TP EA RK CPLD++ LG TWG++HS YYPE P+ + Q A V +A +YPC+ C DF++ I PP+VESR+AFS+W+C+QHNLVNEK+GKP+F C++ +L RW+TG+ CW ED G D Sbjct: 15 CVEPACKSKVDLFRHFVGSDKKGKREASS-----LTPQ-----EAEQRKIECPLDREELGRSTWGLMHSIGVYYPEKPSEEYQRHARSFVEALALMYPCSDCAEDFRKEIAKCPPKVESRQAFSMWLCEQHNLVNEKIGKPLFQCNMSTLSERWRTGKKECWDADQKEDTIPNSLGQD 182
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|970660935|gb|KUF98447.1| (T-complex protein 1 subunit zeta [Phytophthora nicotianae]) HSP 1 Score: 157.147 bits (396), Expect = 5.808e-44 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266 C AC + KS+ G K +++ P A+ CPLD+ LG TWG+LHS YYP+ P+P+ Q+ A V +A +YPC +C DFQ+ I PPRVESR FS+W+C+QHN+VN K+ KPVF C L+ L+ RW+ G+P CWGE G ED+ Sbjct: 10 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTLEKLEERWRKGKPACWGEDGDEDS 161
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|566026862|gb|ETI49773.1| (hypothetical protein F443_06548 [Phytophthora parasitica P1569] >gi|567964046|gb|ETK89537.1| hypothetical protein L915_06417 [Phytophthora parasitica] >gi|567992748|gb|ETL42938.1| hypothetical protein L916_06363 [Phytophthora parasitica] >gi|568022034|gb|ETL96114.1| hypothetical protein L917_06231 [Phytophthora parasitica] >gi|568052392|gb|ETM49268.1| hypothetical protein L914_06344 [Phytophthora parasitica] >gi|570330448|gb|ETO78396.1| hypothetical protein F444_06614 [Phytophthora parasitica P1976] >gi|570954153|gb|ETP19410.1| hypothetical protein F441_06553 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 156.762 bits (395), Expect = 8.196e-44 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266 C AC + KS+ G K +++ P A+ CPLD+ LG TWG+LHS YYP+ P+P+ Q+ A V +A +YPC +C DFQ+ I PPRVESR FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+ Sbjct: 10 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|970634970|gb|KUF80004.1| (Augmenter of liver regeneration [Phytophthora nicotianae]) HSP 1 Score: 156.762 bits (395), Expect = 1.012e-43 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266 C AC + KS+ G K +++ P A+ CPLD+ LG TWG+LHS YYP+ P+P+ Q+ A V +A +YPC +C DFQ+ I PPRVESR FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+ Sbjct: 6 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 157
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|675166429|ref|XP_008892099.1| (hypothetical protein PPTG_02650 [Phytophthora parasitica INRA-310] >gi|568108255|gb|ETN22879.1| hypothetical protein PPTG_02650 [Phytophthora parasitica INRA-310] >gi|570989052|gb|ETP47329.1| hypothetical protein F442_06592 [Phytophthora parasitica P10297]) HSP 1 Score: 156.762 bits (395), Expect = 1.017e-43 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266 C AC + KS+ G K +++ P A+ CPLD+ LG TWG+LHS YYP+ P+P+ Q+ A V +A +YPC +C DFQ+ I PPRVESR FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+ Sbjct: 10 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|301114727|ref|XP_002999133.1| (augmenter of liver regeneration [Phytophthora infestans T30-4] >gi|262111227|gb|EEY69279.1| augmenter of liver regeneration [Phytophthora infestans T30-4]) HSP 1 Score: 155.992 bits (393), Expect = 2.206e-43 Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266 C AC + KS+ G K +++ P A+ CPLD+ LG+ TWG+LHS YYP+ P+P+ Q+ A + +A +YPC +C DFQ+ + PPRVESR FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+ Sbjct: 10 CVEPACADKMDFFKSSMG--KKTKKTATQPKPATD----------------CPLDRQELGNATWGLLHSMGIYYPDKPSPEYQAKAKTFIEALALMYPCVHCAEDFQKEVAISPPRVESRTTFSMWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|635367173|emb|CCI44583.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 154.451 bits (389), Expect = 1.052e-42 Identity = 70/168 (41.67%), Postives = 103/168 (61.31%), Query Frame = 0 Query: 97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGE 264 C ACKS + L + K G S ++S E+A +K CPLD++ LG TWG++HS YYPE+P+ + Q A + +A +YPC+ C DF++ I PPRV+SR++FS+W+C+QHNLVNEK+GKP+F C++ +L RW+TG+ CW + E Sbjct: 15 CVEPACKSKVDLFRHFIKSDKKGIKEESR----------SASVESAQQKAECPLDREELGRSTWGLMHSIGMYYPENPSEEYQRHARSFIEALALMYPCSDCAEDFRKEIIKCPPRVKSRQSFSLWLCEQHNLVNEKIGKPIFQCNMSTLSERWRTGKKECWNIEENE 172 The following BLAST results are available for this feature:
BLAST of EWM25641.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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