EWM25641.1, cds5023 (CDS) Nannochloropsis gaditana

Overview
NameEWM25641.1
Unique Namecds5023
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:992254..993204 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25641.1
Productaugmenter of liver regeneration
Orig transcript idgnl|cribi|Naga_100037g2.10730.mrna
GeneErv1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:992254..993204 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016972thiol oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR017905ERV/ALR_sulphydryl_oxidase
Homology
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|585107469|gb|EWM25641.1| (augmenter of liver regeneration [Nannochloropsis gaditana])

HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query:    1 MWSKTRSGNASFLSRNGRAGRLAPFGPPLRVPLSFESRRSTMANSLSILILSVFLQFLGSKQVKIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316
            MWSKTRSGNASFLSRNGRAGRLAPFGPPLRVPLSFESRRSTMANSLSILILSVFLQFLGSKQVKIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP
Sbjct:    1 MWSKTRSGNASFLSRNGRAGRLAPFGPPLRVPLSFESRRSTMANSLSILILSVFLQFLGSKQVKIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|553180430|ref|XP_005853403.1| (augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >gi|553189896|ref|XP_005855096.1| augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >gi|422293966|gb|EKU21266.1| augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >gi|422295658|gb|EKU22957.1| augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 518.079 bits (1333), Expect = 0.000e+0
Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0
Query:   64 KIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316
            KIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSML LLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDF+ECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHI SAPSPLTRRKSKFYIIEPGVGKKKTGP
Sbjct:    1 KIVLLQALTSSSAMPPPTPPPRIDNPLAAVEEECEHAACKSMLDLLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFEECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGADLTPAGAHTKQQEHIPSAPSPLTRRKSKFYIIEPGVGKKKTGP 253          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|299471431|emb|CBN79383.1| (Mitochondrial intermembrane space Erv1 homolog [Ectocarpus siliculosus])

HSP 1 Score: 176.792 bits (447), Expect = 3.324e-51
Identity = 92/181 (50.83%), Postives = 116/181 (64.09%), Query Frame = 0
Query:   96 ECEHAACKSMLALLKSA---AGMSKSGATSSSSP------SLASSTPSAASSDEAAW---RKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGE 264
            +CE  AC  M  LL+     A  +K  A S+++       S A  + SAA +DE A    R + CPLDK  LG  TWG++H+TAA+YPE P+ + Q  A  LV G+AGLYPCTYCR DF+E ++ LPP V SR A S+W C+QHNLVNEK+GKP F C L +LD RWK G+P CW E G E
Sbjct:   13 DCEDPACADMADLLRKGRALAAKNKQKAASNTATDGKAAGSQAQPSSSAAETDEHAASSSRNDGCPLDKGELGAATWGLIHTTAAHYPEKPSKETQDQARALVTGLAGLYPCTYCRKDFREEVRKLPPDVSSRVALSLWACQQHNLVNEKIGKPTFGCTLPALDERWKKGKPSCW-EGGAE 192          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|325180892|emb|CCA15302.1| (augmenter of liver regeneration putative [Albugo laibachii Nc14])

HSP 1 Score: 162.155 bits (409), Expect = 1.279e-45
Identity = 79/178 (44.38%), Postives = 105/178 (58.99%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDNNHRQAGAD 274
            C   ACKS + L +   G  K G   +SS      TP      EA  RK  CPLD++ LG  TWG++HS   YYPE P+ + Q  A   V  +A +YPC+ C  DF++ I   PP+VESR+AFS+W+C+QHNLVNEK+GKP+F C++ +L  RW+TG+  CW     ED      G D
Sbjct:   15 CVEPACKSKVDLFRHFVGSDKKGKREASS-----LTPQ-----EAEQRKIECPLDREELGRSTWGLMHSIGVYYPEKPSEEYQRHARSFVEALALMYPCSDCAEDFRKEIAKCPPKVESRQAFSMWLCEQHNLVNEKIGKPLFQCNMSTLSERWRTGKKECWDADQKEDTIPNSLGQD 182          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|970660935|gb|KUF98447.1| (T-complex protein 1 subunit zeta [Phytophthora nicotianae])

HSP 1 Score: 157.147 bits (396), Expect = 5.808e-44
Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266
            C   AC   +   KS+ G  K    +++ P  A+                 CPLD+  LG  TWG+LHS   YYP+ P+P+ Q+ A   V  +A +YPC +C  DFQ+ I   PPRVESR  FS+W+C+QHN+VN K+ KPVF C L+ L+ RW+ G+P CWGE G ED+
Sbjct:   10 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTLEKLEERWRKGKPACWGEDGDEDS 161          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|566026862|gb|ETI49773.1| (hypothetical protein F443_06548 [Phytophthora parasitica P1569] >gi|567964046|gb|ETK89537.1| hypothetical protein L915_06417 [Phytophthora parasitica] >gi|567992748|gb|ETL42938.1| hypothetical protein L916_06363 [Phytophthora parasitica] >gi|568022034|gb|ETL96114.1| hypothetical protein L917_06231 [Phytophthora parasitica] >gi|568052392|gb|ETM49268.1| hypothetical protein L914_06344 [Phytophthora parasitica] >gi|570330448|gb|ETO78396.1| hypothetical protein F444_06614 [Phytophthora parasitica P1976] >gi|570954153|gb|ETP19410.1| hypothetical protein F441_06553 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 156.762 bits (395), Expect = 8.196e-44
Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266
            C   AC   +   KS+ G  K    +++ P  A+                 CPLD+  LG  TWG+LHS   YYP+ P+P+ Q+ A   V  +A +YPC +C  DFQ+ I   PPRVESR  FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+
Sbjct:   10 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|970634970|gb|KUF80004.1| (Augmenter of liver regeneration [Phytophthora nicotianae])

HSP 1 Score: 156.762 bits (395), Expect = 1.012e-43
Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266
            C   AC   +   KS+ G  K    +++ P  A+                 CPLD+  LG  TWG+LHS   YYP+ P+P+ Q+ A   V  +A +YPC +C  DFQ+ I   PPRVESR  FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+
Sbjct:    6 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 157          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|675166429|ref|XP_008892099.1| (hypothetical protein PPTG_02650 [Phytophthora parasitica INRA-310] >gi|568108255|gb|ETN22879.1| hypothetical protein PPTG_02650 [Phytophthora parasitica INRA-310] >gi|570989052|gb|ETP47329.1| hypothetical protein F442_06592 [Phytophthora parasitica P10297])

HSP 1 Score: 156.762 bits (395), Expect = 1.017e-43
Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266
            C   AC   +   KS+ G  K    +++ P  A+                 CPLD+  LG  TWG+LHS   YYP+ P+P+ Q+ A   V  +A +YPC +C  DFQ+ I   PPRVESR  FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+
Sbjct:   10 CVEPACADKMGFFKSSMG--KKTKKTAAQPKPATD----------------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|301114727|ref|XP_002999133.1| (augmenter of liver regeneration [Phytophthora infestans T30-4] >gi|262111227|gb|EEY69279.1| augmenter of liver regeneration [Phytophthora infestans T30-4])

HSP 1 Score: 155.992 bits (393), Expect = 2.206e-43
Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 266
            C   AC   +   KS+ G  K    +++ P  A+                 CPLD+  LG+ TWG+LHS   YYP+ P+P+ Q+ A   +  +A +YPC +C  DFQ+ +   PPRVESR  FS+W+C+QHN+VN K+ KPVF C ++ L+ RW+ G+P CWGE G ED+
Sbjct:   10 CVEPACADKMDFFKSSMG--KKTKKTATQPKPATD----------------CPLDRQELGNATWGLLHSMGIYYPDKPSPEYQAKAKTFIEALALMYPCVHCAEDFQKEVAISPPRVESRTTFSMWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161          
BLAST of EWM25641.1 vs. NCBI_GenBank
Match: gi|635367173|emb|CCI44583.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 154.451 bits (389), Expect = 1.052e-42
Identity = 70/168 (41.67%), Postives = 103/168 (61.31%), Query Frame = 0
Query:   97 CEHAACKSMLALLKSAAGMSKSGATSSSSPSLASSTPSAASSDEAAWRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGE 264
            C   ACKS + L +      K G    S           ++S E+A +K  CPLD++ LG  TWG++HS   YYPE+P+ + Q  A   +  +A +YPC+ C  DF++ I   PPRV+SR++FS+W+C+QHNLVNEK+GKP+F C++ +L  RW+TG+  CW  +  E
Sbjct:   15 CVEPACKSKVDLFRHFIKSDKKGIKEESR----------SASVESAQQKAECPLDREELGRSTWGLMHSIGMYYPENPSEEYQRHARSFIEALALMYPCSDCAEDFRKEIIKCPPRVKSRQSFSLWLCEQHNLVNEKIGKPIFQCNMSTLSERWRTGKKECWNIEENE 172          
The following BLAST results are available for this feature:
BLAST of EWM25641.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107469|gb|EWM25641.1|0.000e+0100.00augmenter of liver regeneration [Nannochloropsis g... [more]
gi|553180430|ref|XP_005853403.1|0.000e+098.81augmenter of liver regeneration, partial [Nannochl... [more]
gi|299471431|emb|CBN79383.1|3.324e-5150.83Mitochondrial intermembrane space Erv1 homolog [Ec... [more]
gi|325180892|emb|CCA15302.1|1.279e-4544.38augmenter of liver regeneration putative [Albugo l... [more]
gi|970660935|gb|KUF98447.1|5.808e-4442.94T-complex protein 1 subunit zeta [Phytophthora nic... [more]
gi|566026862|gb|ETI49773.1|8.196e-4442.35hypothetical protein F443_06548 [Phytophthora para... [more]
gi|970634970|gb|KUF80004.1|1.012e-4342.35Augmenter of liver regeneration [Phytophthora nico... [more]
gi|675166429|ref|XP_008892099.1|1.017e-4342.35hypothetical protein PPTG_02650 [Phytophthora para... [more]
gi|301114727|ref|XP_002999133.1|2.206e-4341.18augmenter of liver regeneration [Phytophthora infe... [more]
gi|635367173|emb|CCI44583.1|1.052e-4241.67unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5035rna5035Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications