EWM25670.1, cds5003 (CDS) Nannochloropsis gaditana

Overview
NameEWM25670.1
Unique Namecds5003
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:936348..936520 -
Alignment locationCM002464.1:935596..935854 -
Alignment locationCM002464.1:935265..935351 -
Alignment locationCM002464.1:934973..935147 -
Alignment locationCM002464.1:934697..934794 -
Alignment locationCM002464.1:934440..934552 -
Alignment locationCM002464.1:934162..934303 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25670.1
Producter lumen protein retaining receptor
Orig transcript idgnl|cribi|Naga_100355g6.9420.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:936348..936520 -
CM002464.1supercontigCM002464.1:935596..935854 -
CM002464.1supercontigCM002464.1:935265..935351 -
CM002464.1supercontigCM002464.1:934973..935147 -
CM002464.1supercontigCM002464.1:934697..934794 -
CM002464.1supercontigCM002464.1:934440..934552 -
CM002464.1supercontigCM002464.1:934162..934303 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006621protein retention in ER lumen
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0046923ER retention sequence binding
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0005783endoplasmic reticulum
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR000133ER_ret_rcpt
Homology
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|585107506|gb|EWM25670.1| (er lumen protein retaining receptor [Nannochloropsis gaditana])

HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0
Query:    1 MKMLEHPFARLQAAWASNPELLVVFLYTLLRGSLHCFSGLSNTPRTSNKFSIIMGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 348
            MKMLEHPFARLQAAWASNPELLVVFLYTLLRGSLHCFSGLSNTPRTSNKFSIIMGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV
Sbjct:    1 MKMLEHPFARLQAAWASNPELLVVFLYTLLRGSLHCFSGLSNTPRTSNKFSIIMGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 348          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|553185877|ref|XP_005854326.1| (er lumen protein retaining receptor, partial [Nannochloropsis gaditana CCMP526] >gi|422294733|gb|EKU22033.1| er lumen protein retaining receptor, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0
Identity = 276/337 (81.90%), Postives = 279/337 (82.79%), Query Frame = 0
Query:   12 QAAWASNPELLVVFLYTLLRGSLHCFSGLSNTPRTSNKFSIIMGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 348
            QAAWASNPELLVVFLYTLLRGSLHCFSGLSNTPRTSNKFSIIMGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPC ALAVLFHPGLNSHFLADTTWAFS+                  S++V V                                      FVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV
Sbjct:    1 QAAWASNPELLVVFLYTLLRGSLHCFSGLSNTPRTSNKFSIIMGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCFALAVLFHPGLNSHFLADTTWAFSI-----------------GSKMVGV--------------------------------------FVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 282          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|1210521154|dbj|GAX19902.1| (hypothetical protein FisN_1Lh630 [Fistulifera solaris])

HSP 1 Score: 299.671 bits (766), Expect = 1.926e-96
Identity = 143/264 (54.17%), Postives = 190/264 (71.97%), Query Frame = 0
Query:   84 WVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGL 347
            W GF   SL V+ L+S GDFSF+MTYGA AR FGFG+L VK + ++ ATGVS K+LQLY LVFFFRLTSII   GYLPYDKSGDW YH +E +SL     ++Y   V F  +Y    D FG  +VP   GA VY+AVP L +++  HP LN+ FL+DT W ++MYLES+A++PQLYMFQKQ+S VVE+L  H+V A GF R+++ +FW+ SYHEL   SGS++ G   L +QF+ ++LM+DFF+YY ++V++  PL LP+  G+
Sbjct:   96 WAGFFTASLFVYFLLSGGDFSFLMTYGAMARMFGFGILIVKTYKSQRATGVSVKSLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHLIEIMSLIFTSAALYGCMVPFKGTYQADMDRFGEFNVPPGAGA-VYIAVPVLIISIFIHPNLNADFLSDTAWTYAMYLESMALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLMEFLFWIYSYHELASSSGSRLPGYLALFSQFVQLVLMIDFFWYYYMAVKNATPLVLPQHSGM 358          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|1072230889|gb|OEU15622.1| (hypothetical protein FRACYDRAFT_170314, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 298.516 bits (763), Expect = 4.502e-96
Identity = 147/248 (59.27%), Postives = 182/248 (73.39%), Query Frame = 0
Query:   82 LAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYY 329
            L W GF   SL V+ ++S GDFSF+MTYG  ARTFGFG+L +K + ++ ATGVS KTLQLY +VFFFRLTSII   GYLPYDKSGDW YHFVE +SL L  +++Y   V F H+Y    D FG L VP   GA VYLA P L LA++ HP LN+ F++DT W ++MYLES A+LPQLYMFQKQSS VVE+L  H+VFA GF RV++ +FW+ SYHEL D SGSK+ G   L +  + II+M+DFF+YY
Sbjct:  113 LMWAGFFSASLFVYFMMSGGDFSFLMTYGGMARTFGFGILNLKTFKSQRATGVSIKTLQLYVIVFFFRLTSIIRHEGYLPYDKSGDWLYHFVEGMSLVLASLALYACMVPFKHTYQAELDKFGELLVPPGTGA-VYLAAPILLLAIIVHPNLNADFISDTAWTYAMYLESAALLPQLYMFQKQSSGVVELLTAHFVFALGFGRVMEFLFWIYSYHELADASGSKLPGYLALFSLAVQIIMMLDFFWYY 359          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|1210512311|dbj|GAX28580.1| (hypothetical protein FisN_1Hh630 [Fistulifera solaris])

HSP 1 Score: 298.516 bits (763), Expect = 5.347e-96
Identity = 142/264 (53.79%), Postives = 190/264 (71.97%), Query Frame = 0
Query:   84 WVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGL 347
            W GF   SL V+ L+S GDFSF+MTYGA AR FGFG+L VK + ++ ATGVS K+LQLY LVFFFRLTSII   GYLPYDKSGDW YH +E +SL     ++Y   V F  +Y    D FG  +VP   GA VY+A+P L +++  HP LN+ FL+DT W ++MYLES+A++PQLYMFQKQ+S VVE+L  H+V A GF R+++ +FW+ SYHEL   SGS++ G   L +QF+ ++LM+DFF+YY ++V++  PL LP+  G+
Sbjct:   96 WAGFFTASLFVYFLLSGGDFSFLMTYGAMARMFGFGILIVKTYKSQRATGVSVKSLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHLIEIMSLIFTSAALYGCMVPFKGTYQADMDRFGEFNVPPGAGA-VYIALPVLIISIFIHPNLNADFLSDTAWTYAMYLESMALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLMEFLFWIYSYHELASSSGSRLPGYLALFSQFVQLVLMIDFFWYYYMAVKNATPLVLPQHSGM 358          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|224002334|ref|XP_002290839.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974261|gb|EED92591.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 294.278 bits (752), Expect = 1.875e-95
Identity = 144/264 (54.55%), Postives = 188/264 (71.21%), Query Frame = 0
Query:   82 LAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAG 345
            + W GF   SL V+ ++S GDFSF+MTYGA +R FGFG+L VK + ++ ATGVS KTLQLY LVFFFRLTSII   GYLPYDKSGDW YH +E L+L     +++   V F  +Y    D FG ++VP   GA VYLAVP + LAV  HP LNS F++D  W ++MYLESVA++PQL+MFQKQ S VVE+L  H+V A GF RV++ +FW+ SYHEL   +GSK+ G   L +QF+ ++LM+DFF+YY ++V++  PL LP  G
Sbjct:   11 IMWAGFFTASLFVYFMMSGGDFSFLMTYGAMSRMFGFGILNVKTFMSKRATGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALVFTASALWGCMVPFKQTYQADQDKFGEMNVPPGAGA-VYLAVPVMLLAVFVHPNLNSDFVSDVAWTYAMYLESVALVPQLFMFQKQQSGVVELLTAHFVAALGFGRVMEFMFWVYSYHELATSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHG 273          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|298710843|emb|CBJ26352.1| (er lumen protein retaining receptor 1 [Ectocarpus siliculosus])

HSP 1 Score: 293.893 bits (751), Expect = 3.220e-95
Identity = 150/285 (52.63%), Postives = 198/285 (69.47%), Query Frame = 0
Query:   58 KGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLP 342
            +GG+ NM +      + K   + AL W GF   S VV+ L SDGDFSF+MT+ +F R FGF +L   +   + A GVS K+LQLYA+VF  RL S++   GYLPYD+SGD+ YH  E  SL L +  + L+  +F  +Y +  DSFG LHVP  +G L Y+ VPCL LA++ HP LN +FL+DT W FSMYLES+A++PQL+MFQKQ+  +VEVL+ H  FA G ARVLDM+FWM SY EL  H+GS  VG+FVL +QF+H+++M DFFYYY ISV++G  +QLP
Sbjct:    8 RGGSSNMVMGT----VRKQHMNIAL-WFGFFTASFVVFYLFSDGDFSFLMTFASFTRGFGFAVLLGLMLAKKHARGVSMKSLQLYAVVFASRLVSVLQHEGYLPYDRSGDFVYHGAEIASLALAVGCVVLISTKFKSTYQQDVDSFGALHVPTEWGTL-YIFVPCLLLAIVMHPNLNKNFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGLARVLDMVFWMFSYKELT-HAGSNSVGMFVLFSQFVHVVIMGDFFYYYAISVKTGNMMQLP 285          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|219112663|ref|XP_002178083.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410968|gb|EEC50897.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 288.886 bits (738), Expect = 8.836e-94
Identity = 137/246 (55.69%), Postives = 179/246 (72.76%), Query Frame = 0
Query:   84 WVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYY 329
            W GF  +SLVV+ ++S GDFSF+MTYGA +R FGFG+L VK + +  A+GVS KTLQLY LVFFFRLTSII   GYLPYDKSGDW YHF+E  +L     ++Y   V F  +Y +  D FG  +VP   GA +YLA P L +A+L HP LN+ F++DT W ++MYLES A++PQLYMFQKQ+S VVE+L  H+V A GF R+++  FW+ SYHEL + SGSK+ G   L +QF+ ++LM+DFF+YY
Sbjct:    7 WAGFFTISLVVYSMLSGGDFSFLMTYGAMSRMFGFGILNVKTFKSERASGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHFIEIAALLFTASALYGCMVPFKGTYQKELDRFGEFNVPEGLGA-IYLAGPILIIAILIHPNLNADFISDTAWTYAMYLESTALMPQLYMFQKQASGVVELLTAHFVAALGFGRLMEFFFWIYSYHELANSSGSKLPGYLALFSQFVQLVLMIDFFWYY 251          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|676396829|ref|XP_009041692.1| (hypothetical protein AURANDRAFT_59616 [Aureococcus anophagefferens] >gi|323447705|gb|EGB03617.1| hypothetical protein AURANDRAFT_59616 [Aureococcus anophagefferens])

HSP 1 Score: 288.5 bits (737), Expect = 4.454e-93
Identity = 149/281 (53.02%), Postives = 199/281 (70.82%), Query Frame = 0
Query:   72 LLSKHRQSPALA-WVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNL-HVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQS--SQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 348
            L    R+S  LA W+GFL+LS +V+ + SDGDFSF++TY +  R FG  LL  K+ T++SA G+S KTL  YA+VF  RL SI+   GYLPYD+SGDW YH VE  S    L ++ LV V    SY+E  DSFG L  +P S GALV + +P L  A  FHPGLN  F++DT+W ++MYLES A+LPQL++FQKQS  +  V+ LIGH+V A GF+R+++M FWM+S+HEL D +G++ VGV VL TQ +H+++M DFFY+YL SV  G+P+QLP A G+V
Sbjct:   13 LFEGTRKSSMLAPWLGFLMLSTLVYLVFSDGDFSFLLTYASLTRCFGITLLVAKMQTSQSAAGLSAKTLHCYAVVFASRLVSIMRHEGYLPYDRSGDWIYHCVEFASFGATLAALGLVHVVHGRSYEENNDSFGALPPLPGSLGALVVI-LPTLLFAACFHPGLNKDFISDTSWTYAMYLESFAILPQLFLFQKQSKANATVDYLIGHFVAALGFSRLVEMGFWMNSFHELADRNGNRYVGVLVLATQMVHLVIMGDFFYFYLRSVGRGMPIQLPTAAGMV 292          
BLAST of EWM25670.1 vs. NCBI_GenBank
Match: gi|1173959363|gb|OQS05607.1| (hypothetical protein THRCLA_02290 [Thraustotheca clavata])

HSP 1 Score: 282.722 bits (722), Expect = 5.879e-91
Identity = 140/276 (50.72%), Postives = 187/276 (67.75%), Query Frame = 0
Query:   71 RLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGG 346
              ++KH+ + AL W GF ++ L  + L SDGDFSF+MT+GAF R FGFG+L  K  T RS +G+S KTLQLYA VFFFRL SI+ + GYLPYD+SGDW Y F+E + L L +  ++LV V+F  SY+ R D+FG LHVP+ +G +VY+ VPC+ L +L HP LN ++ AD  W  ++Y+E+VA+LPQL+MFQK+    VE  I HWV+A  F   L + FWM SYHEL +      VG  V+  Q  H+I+M DF YYY  S++ G P+ LP  GG
Sbjct:   10 HFVTKHKGNIAL-WTGFFVIVLFAYHLFSDGDFSFLMTFGAFVRAFGFGILIFKSLTQRSVSGLSLKTLQLYAFVFFFRLCSILRYQGYLPYDRSGDWLYTFIEFVGLALTIGVIFLVTVQFRGSYEFRYDTFGFLHVPSEYG-IVYILVPCIFLGMLIHPNLNMNWFADVAWTIALYIEAVAILPQLFMFQKRGGGTVESCISHWVYALAFGSFLHLWFWMFSYHELGEKDAGHHVGYTVIFVQIGHMIMMGDFLYYYFKSLKDGGPMMLPTHGG 283          
The following BLAST results are available for this feature:
BLAST of EWM25670.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107506|gb|EWM25670.1|0.000e+0100.00er lumen protein retaining receptor [Nannochlorops... [more]
gi|553185877|ref|XP_005854326.1|0.000e+081.90er lumen protein retaining receptor, partial [Nann... [more]
gi|1210521154|dbj|GAX19902.1|1.926e-9654.17hypothetical protein FisN_1Lh630 [Fistulifera sola... [more]
gi|1072230889|gb|OEU15622.1|4.502e-9659.27hypothetical protein FRACYDRAFT_170314, partial [F... [more]
gi|1210512311|dbj|GAX28580.1|5.347e-9653.79hypothetical protein FisN_1Hh630 [Fistulifera sola... [more]
gi|224002334|ref|XP_002290839.1|1.875e-9554.55predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|298710843|emb|CBJ26352.1|3.220e-9552.63er lumen protein retaining receptor 1 [Ectocarpus ... [more]
gi|219112663|ref|XP_002178083.1|8.836e-9455.69predicted protein, partial [Phaeodactylum tricornu... [more]
gi|676396829|ref|XP_009041692.1|4.454e-9353.02hypothetical protein AURANDRAFT_59616 [Aureococcus... [more]
gi|1173959363|gb|OQS05607.1|5.879e-9150.72hypothetical protein THRCLA_02290 [Thraustotheca c... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5015rna5015Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications