EWM25681.1, cds4992 (CDS) Nannochloropsis gaditana

Overview
NameEWM25681.1
Unique Namecds4992
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:906266..907573 -

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Properties
Property NameValue
Start range906266
Start range.
Protein idEWM25681.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101294g1.1195.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:906266..907573 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25681.1 vs. NCBI_GenBank
Match: gi|585107529|gb|EWM25681.1| (hypothetical protein Naga_101294g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 843.573 bits (2178), Expect = 0.000e+0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0 
Query:    1 MAAAYLDGRRSRRRPGLHGLPPAARKITLRVPLTLALLLLLVFPQNISGFVFPSPGKRLHASFFPSSSSFLGGAPGLFTLNATPPPSSDPKRPSPSFSSSSSPSSSPSYQDLNQLLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGGREEGREGVEVAMEVARQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERGRGKRREAEGERDVEDSALMGRGGEKGREGGRTGGREDVLSARVQDDFIREVERAAARQGQREGAEEGGGGDIRTSSLPEGRGSTPGAAGGEGAPNGTGAPPSLSAGGEEEEETYY 436
            MAAAYLDGRRSRRRPGLHGLPPAARKITLRVPLTLALLLLLVFPQNISGFVFPSPGKRLHASFFPSSSSFLGGAPGLFTLNATPPPSSDPKRPSPSFSSSSSPSSSPSYQDLNQLLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGGREEGREGVEVAMEVARQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERGRGKRREAEGERDVEDSALMGRGGEKGREGGRTGGREDVLSARVQDDFIREVERAAARQGQREGAEEGGGGDIRTSSLPEGRGSTPGAAGGEGAPNGTGAPPSLSAGGEEEEETYY
Sbjct:    1 MAAAYLDGRRSRRRPGLHGLPPAARKITLRVPLTLALLLLLVFPQNISGFVFPSPGKRLHASFFPSSSSFLGGAPGLFTLNATPPPSSDPKRPSPSFSSSSSPSSSPSYQDLNQLLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGGREEGREGVEVAMEVARQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERGRGKRREAEGERDVEDSALMGRGGEKGREGGRTGGREDVLSARVQDDFIREVERAAARQGQREGAEEGGGGDIRTSSLPEGRGSTPGAAGGEGAPNGTGAPPSLSAGGEEEEETYY 436
[Close]
BLAST of EWM25681.1 vs. NCBI_GenBank
Match: gi|553177292|ref|XP_005852452.1| (hypothetical protein NGA_0683300, partial [Nannochloropsis gaditana CCMP526] >gi|422296081|gb|EKU23380.1| hypothetical protein NGA_0683300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0 
Query:    1 MAAAYLDGRRSRRRPGLHGLPPAARKITLRVPLTLALLLLLVFPQNISGFVFPSPGKRLHASFFPSSSSFLGGAPGLFTLNATPPPSSDPKRPSPSFSSSSSPSSSPSYQDLNQLLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGGREEGREGVEVAMEVARQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERGRGKRREAEGERDVEDSAL 339
            MAAAYLDGRRSRRRPGLHGLPPAARKITLRVPLTLALLLLLVFPQNISGFVFPSPGKRLHASFFPSSSSFLGGAPGLFTLNATPPPSSDPKRPSPSFSSSSSPSSSPSYQDLNQLLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGGREEGREGVEVAMEVARQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERGRGKRREAEGERDVEDSAL
Sbjct:    1 MAAAYLDGRRSRRRPGLHGLPPAARKITLRVPLTLALLLLLVFPQNISGFVFPSPGKRLHASFFPSSSSFLGGAPGLFTLNATPPPSSDPKRPSPSFSSSSSPSSSPSYQDLNQLLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGGREEGREGVEVAMEVARQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERGRGKRREAEGERDVEDSAL 339
The following BLAST results are available for this feature:
BLAST of EWM25681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107529|gb|EWM25681.1|0.000e+0100.00hypothetical protein Naga_101294g1, partial [Nanno... [more]
gi|553177292|ref|XP_005852452.1|0.000e+0100.00hypothetical protein NGA_0683300, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5004rna5004Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications