EWM25697.1, cds4971 (CDS) Nannochloropsis gaditana

Overview
NameEWM25697.1
Unique Namecds4971
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:842153..842297 -
Alignment locationCM002464.1:841584..841930 -
Alignment locationCM002464.1:841069..841458 -
Alignment locationCM002464.1:840596..840871 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25697.1
ProductIntegral membrane protein TerC
Orig transcript idgnl|cribi|Naga_100222g3.2410.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:842153..842297 -
CM002464.1supercontigCM002464.1:841584..841930 -
CM002464.1supercontigCM002464.1:841069..841458 -
CM002464.1supercontigCM002464.1:840596..840871 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR005496Integral_membrane_TerC
IPR022369Integral_membrane_TerC_rswitch
Homology
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|553183748|ref|XP_005853957.1| (hypothetical protein NGA_0432601 [Nannochloropsis gaditana CCMP526] >gi|422295102|gb|EKU22401.1| hypothetical protein NGA_0432601 [Nannochloropsis gaditana CCMP526] >gi|585107553|gb|EWM25697.1| Integral membrane protein TerC [Nannochloropsis gaditana])

HSP 1 Score: 773.852 bits (1997), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MRGLFIRKEMRVVLLIAGLVSFLAVGSSSTCPTPGDKTQISRAPRQGSAHLPQWVSSRGGLTLPFRQQQIAHAKTATVVKGPSSKGKAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRVLARRDVSG 385
            MRGLFIRKEMRVVLLIAGLVSFLAVGSSSTCPTPGDKTQISRAPRQGSAHLPQWVSSRGGLTLPFRQQQIAHAKTATVVKGPSSKGKAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRVLARRDVSG
Sbjct:    1 MRGLFIRKEMRVVLLIAGLVSFLAVGSSSTCPTPGDKTQISRAPRQGSAHLPQWVSSRGGLTLPFRQQQIAHAKTATVVKGPSSKGKAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRVLARRDVSG 385          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|298715265|emb|CBJ27914.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 342.043 bits (876), Expect = 1.170e-111
Identity = 178/359 (49.58%), Postives = 242/359 (67.41%), Query Frame = 0
Query:   21 SFLAVGSSSTCPTPGDKTQISRAPRQGSAHLPQWVSSRGGLTLPFRQQQIAHAKTATVVKGPSSKGKAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRR--NGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRV 377
            + +A GSSS+  T       +  P + S  L  W  S  G T       +    +A  + G S  G+AV       +     + Y  AV+RT++++  +  FG       GRQ  +EFFAGYL+E+SLSVDN+FVF+M F+YF+VP+E+Q R L+WGI+GA+ MRG+MI  GVAA++RF+W+ ++FA +LL S++KLL E   E  + DLS N LV  +K+LV AVDEYDGD FFTR    GK  ATPL +CL+CIELSDFVFAVDSIPAVLG+S+DP +V++SN+FAIM LRS+Y ++A AV+ L Y+KP+VALVL FVG KM+ E+ H+ +    SL VV+SL+ GG+GLSLL +R 
Sbjct:   33 AHMAFGSSSSGATCVKSAPYAYNPLEHSTSL-GWQQSLMGAT----DVDLGAEPSAADIGGSSHGGRAVHNNLDGGSMPQQSKTYRMAVKRTVMSIALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEE--DHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRC 384          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|553186027|ref|XP_005854349.1| (hypothetical protein NGA_0191400 [Nannochloropsis gaditana CCMP526] >gi|422294715|gb|EKU22015.1| hypothetical protein NGA_0191400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 300.056 bits (767), Expect = 1.041e-96
Identity = 165/290 (56.90%), Postives = 215/290 (74.14%), Query Frame = 0
Query:   85 KGKAVGKRGKSPAAIDAGE-AYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGK-RYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSL 372
            K KAVG  G+   +I   E  Y  A  +T L+VG+A  FG G+W  +G    +E++AGYL+E+SLSVDN+FVF++LFEYFKVP ++Q R LSWGI GA+AMR +M+F GV AI+ FR V+L FAG+L+ ++ KLLAE   EGGEEDL++N +V +A+ L+  VD YDG NFFT   G+ R ATPL + LIC+ELSD VFAVDS+PAV GV+KDP IVY+SNIFAI+ LRSLYT++A A+  L Y+KP+VAL+L  VG K+ AE+F  EV  +VSL V+ SLLG G+  SL
Sbjct:   19 KIKAVGNAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGADSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASL 308          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|397642873|gb|EJK75512.1| (hypothetical protein THAOC_02764 [Thalassiosira oceanica])

HSP 1 Score: 300.827 bits (769), Expect = 1.196e-96
Identity = 147/274 (53.65%), Postives = 210/274 (76.64%), Query Frame = 0
Query:  103 EAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQR 376
            E Y  A++RTLL VG A AFG GL  + G   A EFFAGYL+E+SLSVDN+FVF++LFEYF+VP+  Q R L+WGI GA+ MR +MI VG AA++ FR ++L+FA +L+ S+ K L     +  EEDL++N +V +++KL  + D++DG NFFT  +G + ATPLF+C+I +E+SD VFAVDSIPAV GV+++PL+V+SSN+FAIM LRSLYT+++ A + L+Y++P+V +VL F+G KM+AE+F  EVP  ++L VV ++L GG+GLS+ ++R
Sbjct:   63 EIYQQAIQRTLLWVGLAVAFGSGLGVLVGPDTAEEFFAGYLVEQSLSVDNLFVFLLLFEYFQVPLRSQDRVLNWGIYGAIVMRAVMIGVGAAALKEFRAILLVFAAILVYSSAKTLIPGDEDEEEEDLNDNAIVKFSRKLFDSTDQFDGSNFFTMVDGVKMATPLFICMIALEISDVVFAVDSIPAVFGVTENPLVVFSSNMFAIMGLRSLYTILSQAASDLKYLEPAVGVVLGFIGSKMIAEYFGTEVPTEIALGVVATVLSGGVGLSVWERR 336          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|585108338|gb|EWM26331.1| (Integral membrane protein TerC [Nannochloropsis gaditana])

HSP 1 Score: 300.442 bits (768), Expect = 1.165e-95
Identity = 165/290 (56.90%), Postives = 215/290 (74.14%), Query Frame = 0
Query:   85 KGKAVGKRGKSPAAIDAGE-AYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGK-RYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSL 372
            K KAVG  G+   +I   E  Y  A  +T L+VG+A  FG G+W  +G    +E++AGYL+E+SLSVDN+FVF++LFEYFKVP ++Q R LSWGI GA+AMR +M+F GV AI+ FR V+L FAG+L+ ++ KLLAE   EGGEEDL++N +V +A+ L+  VD YDG NFFT   G+ R ATPL + LIC+ELSD VFAVDS+PAV GV+KDP IVY+SNIFAI+ LRSLYT++A A+  L Y+KP+VAL+L  VG K+ AE+F  EV  +VSL V+ SLLG G+  SL
Sbjct:  103 KIKAVGNAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGADSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASL 392          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|1079249360|ref|XP_018498932.1| (PREDICTED: thylakoid membrane protein TERC, chloroplastic isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 290.812 bits (743), Expect = 2.408e-92
Identity = 152/312 (48.72%), Postives = 205/312 (65.71%), Query Frame = 0
Query:   68 QQIAHAKTATVVKGPSSKGKAVGK----RGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQ 375
            +Q     T+   +G S+    +         SP  I   EAYA +VR   L V AA AFG G+ F +G   A EFFAGYL+E+SLSVDN+FVF+++F+YFKVPI YQ+R LS+GI GAV  R  +I +G A +QRF  V LL A +LL S+FKL +    E  + DLSNN +V   ++ +     YDG+ FFT ++G R ATPL + +  IELSD  FAVDSIPAV GV++DP IV+SSN+FAI+ LRSLYTL++  ++ LEY++PS+A+VL F+G KM+ +FF   V   VSL  V + L  G+ LSL+K+
Sbjct:   63 EQDDDLSTSEEKRGDSASRDGISNAEPSHNDSPDKIKGREAYAASVRTVALWVCAAVAFGIGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLVFKYFKVPIMYQNRVLSYGIAGAVVFRLTLILLGTATLQRFEAVNLLLAAILLYSSFKLFSS---EEDDTDLSNNFIVKTCQRFIPVTSNYDGNRFFTFQDGVRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAIVGLRSLYTLISAGMSDLEYLQPSIAVVLGFIGCKMILDFFGFHVSTEVSLGFVATSLSAGVLLSLMKK 371          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|1079249358|ref|XP_018498931.1| (PREDICTED: thylakoid membrane protein TERC, chloroplastic isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 290.812 bits (743), Expect = 2.591e-92
Identity = 152/312 (48.72%), Postives = 205/312 (65.71%), Query Frame = 0
Query:   68 QQIAHAKTATVVKGPSSKGKAVGK----RGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQ 375
            +Q     T+   +G S+    +         SP  I   EAYA +VR   L V AA AFG G+ F +G   A EFFAGYL+E+SLSVDN+FVF+++F+YFKVPI YQ+R LS+GI GAV  R  +I +G A +QRF  V LL A +LL S+FKL +    E  + DLSNN +V   ++ +     YDG+ FFT ++G R ATPL + +  IELSD  FAVDSIPAV GV++DP IV+SSN+FAI+ LRSLYTL++  ++ LEY++PS+A+VL F+G KM+ +FF   V   VSL  V + L  G+ LSL+K+
Sbjct:   65 EQDDDLSTSEEKRGDSASRDGISNAEPSHNDSPDKIKGREAYAASVRTVALWVCAAVAFGIGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLVFKYFKVPIMYQNRVLSYGIAGAVVFRLTLILLGTATLQRFEAVNLLLAAILLYSSFKLFSS---EEDDTDLSNNFIVKTCQRFIPVTSNYDGNRFFTFQDGVRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAIVGLRSLYTLISAGMSDLEYLQPSIAVVLGFIGCKMILDFFGFHVSTEVSLGFVATSLSAGVLLSLMKK 373          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|1079249362|ref|XP_018498933.1| (PREDICTED: thylakoid membrane protein TERC, chloroplastic isoform X4 [Pyrus x bretschneideri])

HSP 1 Score: 290.812 bits (743), Expect = 2.717e-92
Identity = 149/289 (51.56%), Postives = 197/289 (68.17%), Query Frame = 0
Query:   87 KAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQ 375
             A      SP  I   EAYA +VR   L V AA AFG G+ F +G   A EFFAGYL+E+SLSVDN+FVF+++F+YFKVPI YQ+R LS+GI GAV  R  +I +G A +QRF  V LL A +LL S+FKL +    E  + DLSNN +V   ++ +     YDG+ FFT ++G R ATPL + +  IELSD  FAVDSIPAV GV++DP IV+SSN+FAI+ LRSLYTL++  ++ LEY++PS+A+VL F+G KM+ +FF   V   VSL  V + L  G+ LSL+K+
Sbjct:   85 NAEPSHNDSPDKIKGREAYAASVRTVALWVCAAVAFGIGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLVFKYFKVPIMYQNRVLSYGIAGAVVFRLTLILLGTATLQRFEAVNLLLAAILLYSSFKLFSS---EEDDTDLSNNFIVKTCQRFIPVTSNYDGNRFFTFQDGVRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAIVGLRSLYTLISAGMSDLEYLQPSIAVVLGFIGCKMILDFFGFHVSTEVSLGFVATSLSAGVLLSLMKK 370          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|1079249356|ref|XP_018498930.1| (PREDICTED: thylakoid membrane protein TERC, chloroplastic isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 290.426 bits (742), Expect = 5.467e-92
Identity = 149/289 (51.56%), Postives = 197/289 (68.17%), Query Frame = 0
Query:   87 KAVGKRGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQ 375
             A      SP  I   EAYA +VR   L V AA AFG G+ F +G   A EFFAGYL+E+SLSVDN+FVF+++F+YFKVPI YQ+R LS+GI GAV  R  +I +G A +QRF  V LL A +LL S+FKL +    E  + DLSNN +V   ++ +     YDG+ FFT ++G R ATPL + +  IELSD  FAVDSIPAV GV++DP IV+SSN+FAI+ LRSLYTL++  ++ LEY++PS+A+VL F+G KM+ +FF   V   VSL  V + L  G+ LSL+K+
Sbjct:   96 NAEPSHNDSPDKIKGREAYAASVRTVALWVCAAVAFGIGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLVFKYFKVPIMYQNRVLSYGIAGAVVFRLTLILLGTATLQRFEAVNLLLAAILLYSSFKLFSS---EEDDTDLSNNFIVKTCQRFIPVTSNYDGNRFFTFQDGVRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAIVGLRSLYTLISAGMSDLEYLQPSIAVVLGFIGCKMILDFFGFHVSTEVSLGFVATSLSAGVLLSLMKK 381          
BLAST of EWM25697.1 vs. NCBI_GenBank
Match: gi|658040115|ref|XP_008355652.1| (PREDICTED: thylakoid membrane protein TERC, chloroplastic-like isoform X4 [Malus domestica])

HSP 1 Score: 289.271 bits (739), Expect = 8.848e-92
Identity = 147/284 (51.76%), Postives = 195/284 (68.66%), Query Frame = 0
Query:   92 RGKSPAAIDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQ 375
               SP  I   EAYA +VR   L V AA AFG G+ F +G   A EFFAGYL+E+SLSVDN+FVF+++F+YFKVPI YQ+R LS+GI GAV  R  +I +G A +QRF  V L  A +LL S+FKL +    E  + DLSNN +V   ++ +     YDG+ FFT ++G R ATPL + +  IELSD  FAVDSIPAV GV++DP IV+SSN+FAI+ LRSLYTL++  ++ LEY++PS+A+VL F+G KM+ +FF   V   VSL  V + L  G+ LSL+K+
Sbjct:   90 HNDSPDKIKGREAYAASVRTVALWVCAAVAFGIGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLVFKYFKVPIMYQNRVLSYGIAGAVVFRLTLILLGTATLQRFEVVNLFLAAILLYSSFKLFSS---EEDDTDLSNNFIVKTCQRFIPVTSNYDGNRFFTFQDGVRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAIVGLRSLYTLISAGMSDLEYLQPSIAVVLGFIGCKMILDFFGFHVSTEVSLGFVATSLSAGVLLSLMKK 370          
The following BLAST results are available for this feature:
BLAST of EWM25697.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553183748|ref|XP_005853957.1|0.000e+0100.00hypothetical protein NGA_0432601 [Nannochloropsis ... [more]
gi|298715265|emb|CBJ27914.1|1.170e-11149.58conserved unknown protein [Ectocarpus siliculosus][more]
gi|553186027|ref|XP_005854349.1|1.041e-9656.90hypothetical protein NGA_0191400 [Nannochloropsis ... [more]
gi|397642873|gb|EJK75512.1|1.196e-9653.65hypothetical protein THAOC_02764 [Thalassiosira oc... [more]
gi|585108338|gb|EWM26331.1|1.165e-9556.90Integral membrane protein TerC [Nannochloropsis ga... [more]
gi|1079249360|ref|XP_018498932.1|2.408e-9248.72PREDICTED: thylakoid membrane protein TERC, chloro... [more]
gi|1079249358|ref|XP_018498931.1|2.591e-9248.72PREDICTED: thylakoid membrane protein TERC, chloro... [more]
gi|1079249362|ref|XP_018498933.1|2.717e-9251.56PREDICTED: thylakoid membrane protein TERC, chloro... [more]
gi|1079249356|ref|XP_018498930.1|5.467e-9251.56PREDICTED: thylakoid membrane protein TERC, chloro... [more]
gi|658040115|ref|XP_008355652.1|8.848e-9251.76PREDICTED: thylakoid membrane protein TERC, chloro... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4983rna4983Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications