EWM30162.1, cds497 (CDS) Nannochloropsis gaditana

Overview
NameEWM30162.1
Unique Namecds497
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1246631..1246685 -
Alignment locationCM002455.1:1246373..1246456 -
Alignment locationCM002455.1:1245910..1246136 -
Alignment locationCM002455.1:1245689..1245797 -
Alignment locationCM002455.1:1245468..1245525 -
Alignment locationCM002455.1:1244979..1245297 -
Alignment locationCM002455.1:1244679..1244805 -
Alignment locationCM002455.1:1244346..1244533 -
Alignment locationCM002455.1:1244238..1244255 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30162.1
Producttransmembrane protein 30a
Orig transcript idgnl|cribi|Naga_100096g5.970.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1246631..1246685 -
CM002455.1supercontigCM002455.1:1246373..1246456 -
CM002455.1supercontigCM002455.1:1245910..1246136 -
CM002455.1supercontigCM002455.1:1245689..1245797 -
CM002455.1supercontigCM002455.1:1245468..1245525 -
CM002455.1supercontigCM002455.1:1244979..1245297 -
CM002455.1supercontigCM002455.1:1244679..1244805 -
CM002455.1supercontigCM002455.1:1244346..1244533 -
CM002455.1supercontigCM002455.1:1244238..1244255 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005045CDC50/LEM3_fam
Homology
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|585112819|gb|EWM30162.1| (transmembrane protein 30a [Nannochloropsis gaditana])

HSP 1 Score: 812.757 bits (2098), Expect = 0.000e+0
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
Query:    1 MAGQSNSDTVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKEQ 394
            MAGQSNSDTVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKEQ
Sbjct:    1 MAGQSNSDTVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKEQ 394          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|553182307|ref|XP_005853711.1| (transmembrane protein 30a, partial [Nannochloropsis gaditana CCMP526] >gi|422295352|gb|EKU22651.1| transmembrane protein 30a, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 326.25 bits (835), Expect = 3.624e-109
Identity = 156/158 (98.73%), Postives = 158/158 (100.00%), Query Frame = 0
Query:    1 MAGQSNSDTVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVA 158
            MAGQSNS+TVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGN+LSEAELSDCDPLRTINVA
Sbjct:    1 MAGQSNSETVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNILSEAELSDCDPLRTINVA 158          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|669150618|ref|XP_008610871.1| (hypothetical protein SDRG_06844 [Saprolegnia diclina VS20] >gi|530737312|gb|EQC35554.1| hypothetical protein SDRG_06844 [Saprolegnia diclina VS20])

HSP 1 Score: 294.278 bits (752), Expect = 3.458e-93
Identity = 185/437 (42.33%), Postives = 228/437 (52.17%), Query Frame = 0
Query:    7 SDTVPLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEG--TPE----------SLADCQILDPNEASA----HPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRV------------------LSPCGLIANSFFND--WYVLASPPTGP-------------ANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKEQ 394
            S+T    S++P+DT FKQQRL AWQPILTP WVI TF LVGLIF+P+G+ L  ++  IVE SLQYDG    TP           S   C + +  E  A       C V F +  +MKAPI VYYQLDNFYQNHRRYV SRSDAQL G+ +    +S C        AG T V                   +PCGLIANS FND  W    + P G               NL ++  G+AW+SD++ +F  P    ++  +   +       P            G TA    PTP               LY            GV  E FIVWMRTAGLP FRKLYGKI+ DLP GT L F V   F V  F G+K LV+ST+SW+GG N FLG++Y+V+GS+C+ L+ +F  K    PRKLGDT YL WK +
Sbjct:    2 SNTDAEHSKRPDDTPFKQQRLKAWQPILTPNWVIGTFFLVGLIFIPIGVFLFEENKNIVEMSLQYDGVNMHTPSASDGVALQNVSANGCYLKNAKEGDAFNLTEHGCVVQFTLQEDMKAPIMVYYQLDNFYQNHRRYVSSRSDAQLRGDPVVHP-ISTC-----TGSAGITGVKYNSTEDLAPGAPSAFYRFNPCGLIANSLFNDLFWINSITTPDGKYLGQTDTYKGKEVVNL-MEQSGLAWQSDIETKFENPKTLSSDDMMLWQNPKYRFVIPSRLGQERILNVTGWTA----PTP---------------LY------------GVETERFIVWMRTAGLPNFRKLYGKINTDLPKGTVLRFLVSSNFAVTPFEGKKSLVISTLSWYGGRNPFLGVAYMVIGSICIVLSLIFFAKHKMTPRKLGDTNYLVWKAK 400          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|1072237195|gb|OEU21922.1| (Lem3/Cdc50 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 287.73 bits (735), Expect = 1.477e-90
Identity = 160/400 (40.00%), Postives = 224/400 (56.00%), Query Frame = 0
Query:   13 KSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAE-------LSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGPA--------NLTLDVEGIAWESDVDRRFAQPDGFLAE--PNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVF-YPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKEQ 394
            ++ +P D   +QQR+ AW PIL P W+I+++ ++ LI +P G  L  +SD IVE +  YD  G  +    C  +  N  +A+  CT+TF++T++M  P+ +YY L NF+QN+R Y +SR D QL G V  +          + C P   INV G T V++PCGLIAN+FFND + L    T  A         L L  +GIAW+SD+  RF  P+GF +   P+ +   CD+           ATY+    T   +  T      + YP+ D   YLYQ YP   +  +E VTNEHFIVWMR A  P FRKLYG IDQ +PAGT L+F V+  + V SF G K   ++T S +G  +S +GI+   +G  CL     FG+KQ   PRK+ D +YL +KE+
Sbjct:   18 QTNRPRDVPIQQQRINAWHPILDPNWMIVSYLILALIMIPFGYHLAKESDKIVELTQLYDAGGNTDMTEACPSIGMN-YNANENCTLTFNVTKQMDPPVLIYYGLTNFHQNYRSYTESRDDYQLTGTVYDDKNNNQDQLSKTKCHP---INVLGNT-VINPCGLIANTFFNDKFTLGDDTTTSAPPVDDLDQKLILREDGIAWQSDLKYRFKMPNGFNSTVCPDESAESCDS-----TSTCCTATYSDWSCTVPAINQTDNKCYAYNYPQQDTTQYLYQTYPTIIS-PLEHVTNEHFIVWMRIAAQPKFRKLYGYIDQTIPAGTILNFNVNMNYVVESFGGTKSFTITTNSMWGTKDSSIGITIYSIGYFCLACGVFFGLKQYFRPRKIADRKYLHYKEE 406          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|219116879|ref|XP_002179234.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409125|gb|EEC49057.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 267.314 bits (682), Expect = 7.989e-83
Identity = 160/404 (39.60%), Postives = 218/404 (53.96%), Query Frame = 0
Query:    1 MAGQSNSDTVPL-----KSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSD--CDPLRTINVAGETRVLSPCGLIANSFFNDWYVLAS-PPTGPANLTLDVEGIAWESDVDRRFAQPDGFL---AEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKE 393
            MAG  + D   +     ++ +P DTAF QQR+ AW PIL P WVII    +G+I VP G  +      +VE   +YDG    + +  C I    E +A+  C + F   R M+API ++Y+L NF+QNHR Y  SR D QL G V ++  +S   C PL  +      + L+PCGL AN+ FND++ L S       +L +   GIAW+SD++  + QP+GF     EPN   + C     T  G+  +       G       T + +   YP  D+  YLY+ YP   +  +EGVTNEHF+VWMR A  PTFRKLYG IDQD+PAG  L F V+  + V  F G K L++ST + FGG N + G  +  VG  CL     F  K A  PR+LGD  YL +K+
Sbjct:    1 MAGSLDDDEDSVLDESEQTNRPTDTAFSQQRIQAWHPILDPVWVIIALFYLGVIMVPTGFKIDSLQKNVVELKTKYDGILPKDQV--CGI--GGEFNANRTCFLNFTAPRYMRAPILIHYELTNFHQNHRSYYDSRDDFQLHGRVGNQDSVSRKACQPLNKLG----NKTLNPCGLAANTMFNDFFTLESGRDINRIDLEMLETGIAWKSDIEYMYRQPEGFEYAECEPNACDSTC-CERTTENGERFSC------GAPYFDRKTDKCFAYHYPLQDETQYLYETYPDVIS-PIEGVTNEHFVVWMRIATQPTFRKLYGWIDQDIPAGETLRFRVNANYVVTRFQGSKSLLISTNNIFGGRNPYFGSFFFWVGIFCLAAGTFFAFKHAFRPRRLGDGNYLHYKD 388          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|298709459|emb|CBJ31365.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 258.84 bits (660), Expect = 3.021e-80
Identity = 143/336 (42.56%), Postives = 195/336 (58.04%), Query Frame = 0
Query:   58 KIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKE 393
            ++    +VE+  +YDG+     +  C+I + N+ +    C+V  ++   MK PIYVYY+L+N++QNHRRYVKSRS  QL+G  +   E  +C+PL    V GE   L+PCGLIANS FND   L +       +T+  + I+WESD + RF QP GF      A   C   LG        + Y+  G        T   +  +YP+ +   +LY+ YP   +  +EGV NEHFIVWMRTAGLP FRKLYG+ID+ + A   L+F +   F V  FSG K LVVS +S  G  N +LGI+YI +GSL L +   F IK  + PRKLGDTR+L WK+
Sbjct:   16 RLLERTVVEFKRRYDGDNV--DVEGCKITEGNQGTT---CSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDE--NCEPLERTTVGGEIMDLNPCGLIANSMFNDIIQLTTE-----GVTMSEKDISWESDRETRFKQPPGFTFAECSADTSCSDCLG-------GSKYSSCGDHTDE--STGTEYKFWYPDDETTQFLYETYPEVVS-PIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQVLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKD 329          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|299115309|emb|CBN74125.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 251.906 bits (642), Expect = 5.501e-77
Identity = 152/379 (40.11%), Postives = 205/379 (54.09%), Query Frame = 0
Query:   11 PLKSRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYL 389
            P  S KP +  + QQ L +W P+LTP   +  + L+GLIFVPLG VL    D +    L+Y  +G      DC+I    E   +  CT+TFD+ +++  P YVYY+L NFYQNH  YV S   +QL+G+  S +++ DCDPL    +   T VL PCGLIAN+ FND + ++S  T      ++   IAW+SDV  +F QPDGF+         C+   G       A      GGT             +YP+ D   YLY+ +P   +  ++GV NEHFIVWMR +GL +FRKLYG+ID  L  G  LSF V   F V  + G K ++VS  + FGG N + G S   +G + L LA L  IKQ   PR +GD   L
Sbjct:   12 PELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVV---ELRYQYDGDGSDGDDCKITTYKE---NLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGST-STSDIDDCDPL----IYNGTLVLHPCGLIANTLFNDIFTVSSGQT------MEETDIAWDSDVADKFVQPDGFVTTA------CEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVIS-PLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKL 366          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|780154716|ref|XP_011682205.1| (PREDICTED: cell cycle control protein 50A isoform X4 [Strongylocentrotus purpuratus])

HSP 1 Score: 234.572 bits (597), Expect = 6.617e-70
Identity = 155/406 (38.18%), Postives = 203/406 (50.00%), Query Frame = 0
Query:   14 SRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPES----LADCQILD--PNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMG-NVLSEAELSDCDPLRT-----INVAGETRVLSPCGLIANSFFNDWYVL-----ASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKI--------DQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKEQ 394
            S+KP +TAFKQQRLPAWQPILT   V+  F LVG++FVPLG+   + S+ + E  L Y    T ++      DC      P   ++   CT+ F++  ++  PIY+YY+L N+YQNHRRYV SR D QL+G N LS +  SDC P         N + E    +PCG IANS FND + +        P+G   L LD   IAW SD+  +F  P G   E                 +A   T  PP             W        K+ +  Q          +G  NE FIVWMRTA  PTFRKLYG++        D  LP G   + TV   + V  F G K +V++T SW GG N+FLGI+YIV GS+C+   ALF I      +KL   +   WK +
Sbjct:   39 SKKPGNTAFKQQRLPAWQPILTAGTVLPMFFLVGIVFVPLGVGFLVTSNNVQEVVLDYTTSCTYQNATNGTKDCTDFYEYPENENSSCTCTMKFELNTKIDGPIYMYYRLTNYYQNHRRYVNSRDDIQLLGKNPLSVS--SDCSPYDEELCIYSNTSEEKIPYAPCGAIANSLFNDTFNITFDDDGQLPSGKEVL-LDRTNIAWASDIRTKFRNPTGASLE-----------------EAFNGTTKPPN------------W-------QKYIWEMQ----------DGYQNEDFIVWMRTAAFPTFRKLYGRVVDQPNTRLDNGLPVG-NYTLTVQYNYLVHMFDGTKSIVLTTTSWLGGKNNFLGIAYIVTGSVCIVFGALFLIVHIRHGKKLAHVK--AWKSK 392          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|1210530805|dbj|GAX10756.1| (hypothetical protein FisN_14Lh276 [Fistulifera solaris])

HSP 1 Score: 235.343 bits (599), Expect = 2.035e-69
Identity = 140/381 (36.75%), Postives = 192/381 (50.39%), Query Frame = 0
Query:   16 KPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPESLADCQILDPNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMGNVLSEAELSDCDPLRTINVAGETRVLSPCGLIANSFFNDWYVLASPPTGP-ANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCV--FYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKIDQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTRYLGWKE 393
            +P D AF QQR+ AW PIL PKWV I    +G+I +P+G  +      +VE  + YD  G  +     Q    N  +A   C +T    R+M  PI+++Y+L NFYQNHR Y  +R + QL G   +  +L  C PL  +        L+PCGL AN+ FND   L        A+L +  EGIAW +D++ +F    GF  E      +C   +G  P       ++       P+       C   FYP+ D   YLY+ YP   +  +E V NEHF+VWMR A  P FRKLYG IDQ + AG +++F ++  + V  F G K L+V T S FGG NS     ++  G   +     FG K    PRKL D +YL  KE
Sbjct:  105 RPVDNAFNQQRIEAWSPILDPKWVSIALIYLGIIMIPVGYKIDSIQKDVVEMKVTYDAYGHDDDPIVRQCGINNTYNADHNCNITLTAPRDMNPPIFIHYELSNFYQNHRSYYTNRDEYQLRGETTAGDDLF-CSPLHKLGDIS----LNPCGLTANTMFNDIITLVEGKDASGADLQMIEEGIAWGTDLEYKFQPARGFKKE------ECPDDIGCTPACCEGEDWS----CQEPVVDKKDGLCYRYFYPDEDTVQYLYETYPKIVS-PLEHVQNEHFVVWMRIAVNPDFRKLYGWIDQPIAAGEKITFQINNNYVVQRFRGSKTLIVGTTSIFGGRNSTFATVFLGPGYFFIVAGLFFGFKLFYKPRKLADPKYLHLKE 469          
BLAST of EWM30162.1 vs. NCBI_GenBank
Match: gi|780154725|ref|XP_011682207.1| (PREDICTED: cell cycle control protein 50A isoform X6 [Strongylocentrotus purpuratus])

HSP 1 Score: 232.646 bits (592), Expect = 3.409e-69
Identity = 154/399 (38.60%), Postives = 200/399 (50.13%), Query Frame = 0
Query:   14 SRKPEDTAFKQQRLPAWQPILTPKWVIITFTLVGLIFVPLGIVLKIQSDAIVEYSLQYDGEGTPES----LADCQILD--PNEASAHPPCTVTFDITREMKAPIYVYYQLDNFYQNHRRYVKSRSDAQLMG-NVLSEAELSDCDPLRT-----INVAGETRVLSPCGLIANSFFNDWYVL-----ASPPTGPANLTLDVEGIAWESDVDRRFAQPDGFLAEPNLAGADCDALLGTPPGQAVAATYTPPGGTAGPLPPTPQPWCVFYPEPDKFFYLYQRYPFFPNLAVEGVTNEHFIVWMRTAGLPTFRKLYGKI--------DQDLPAGTQLSFTVHPGFEVVSFSGRKHLVVSTVSWFGGANSFLGISYIVVGSLCLFLAALFGIKQATCPRKLGDTR 387
            S+KP +TAFKQQRLPAWQPILT   V+  F LVG++FVPLG+   + S+ + E  L Y    T ++      DC      P   ++   CT+ F++  ++  PIY+YY+L N+YQNHRRYV SR D QL+G N LS +  SDC P         N + E    +PCG IANS FND + +        P+G   L LD   IAW SD+  +F  P G   E                 +A   T  PP             W        K+ +  Q          +G  NE FIVWMRTA  PTFRKLYG++        D  LP G   + TV   + V  F G K +V++T SW GG N+FLGI+YIV GS+C+   ALF I      +KL   R
Sbjct:   39 SKKPGNTAFKQQRLPAWQPILTAGTVLPMFFLVGIVFVPLGVGFLVTSNNVQEVVLDYTTSCTYQNATNGTKDCTDFYEYPENENSSCTCTMKFELNTKIDGPIYMYYRLTNYYQNHRRYVNSRDDIQLLGKNPLSVS--SDCSPYDEELCIYSNTSEEKIPYAPCGAIANSLFNDTFNITFDDDGQLPSGKEVL-LDRTNIAWASDIRTKFRNPTGASLE-----------------EAFNGTTKPPN------------W-------QKYIWEMQ----------DGYQNEDFIVWMRTAAFPTFRKLYGRVVDQPNTRLDNGLPVG-NYTLTVQYNYLVHMFDGTKSIVLTTTSWLGGKNNFLGIAYIVTGSVCIVFGALFLIVHIRHGKKLDVQR 387          
The following BLAST results are available for this feature:
BLAST of EWM30162.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112819|gb|EWM30162.1|0.000e+0100.00transmembrane protein 30a [Nannochloropsis gaditan... [more]
gi|553182307|ref|XP_005853711.1|3.624e-10998.73transmembrane protein 30a, partial [Nannochloropsi... [more]
gi|669150618|ref|XP_008610871.1|3.458e-9342.33hypothetical protein SDRG_06844 [Saprolegnia dicli... [more]
gi|1072237195|gb|OEU21922.1|1.477e-9040.00Lem3/Cdc50 [Fragilariopsis cylindrus CCMP1102][more]
gi|219116879|ref|XP_002179234.1|7.989e-8339.60predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298709459|emb|CBJ31365.1|3.021e-8042.56conserved unknown protein [Ectocarpus siliculosus][more]
gi|299115309|emb|CBN74125.1|5.501e-7740.11conserved unknown protein [Ectocarpus siliculosus][more]
gi|780154716|ref|XP_011682205.1|6.617e-7038.18PREDICTED: cell cycle control protein 50A isoform ... [more]
gi|1210530805|dbj|GAX10756.1|2.035e-6936.75hypothetical protein FisN_14Lh276 [Fistulifera sol... [more]
gi|780154725|ref|XP_011682207.1|3.409e-6938.60PREDICTED: cell cycle control protein 50A isoform ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna497rna497Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications