EWM25708.1, cds4965 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|585107566|gb|EWM25708.1| (nucleosome chromatin assembly complex protein [Nannochloropsis gaditana]) HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0 Query: 1 MADEASKKPEGASPFANTTFSFTAPQGGVTGPFPSLSGFQQALADAAQGAAEEEGEEEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEGEEDESEYADSVGESEEDDEDESVTESSDDDEPSPPQRRPRQPGRPRRGGR 372 MADEASKKPEGASPFANTTFSFTAPQGGVTGPFPSLSGFQQALADAAQGAAEEEGEEEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEGEEDESEYADSVGESEEDDEDESVTESSDDDEPSPPQRRPRQPGRPRRGGR Sbjct: 1 MADEASKKPEGASPFANTTFSFTAPQGGVTGPFPSLSGFQQALADAAQGAAEEEGEEEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEGEEDESEYADSVGESEEDDEDESVTESSDDDEPSPPQRRPRQPGRPRRGGR 372
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|971511546|dbj|GAQ86671.1| (nucleosome assembly protein [Klebsormidium nitens]) HSP 1 Score: 172.94 bits (437), Expect = 1.569e-46 Identity = 111/275 (40.36%), Postives = 163/275 (59.27%), Query Frame = 0 Query: 57 EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKE-------EDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPK-GKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEGE 323 E + +V+ R+E LKKLQ+E +E + + +E+ L KY APL KR A++ G + +E E + E+ EA + E +E E KGIPNFWL L ++ I + E+D GAL+YLRD++ E GF+L FHFA PNPYF+N VL+K+Y +++D E IL+ GT I W++ K NL + R KPK G + K + SFFN+F IPED D++E+E EEL +++ DY V S L+E+I+P A++W+ GE + Sbjct: 60 ESLPKKVKNRVENLKKLQEEHDELEEQYLKEKAELEAKYNAKYAPLYEKRAAIVGGEFEPEELPPKEGEEAKEGEEEKPEATSSENKEDEDV--KGIPNFWLTALRNNLTIEETISEKDEGALEYLRDIKWHPLESQKGFTLEFHFA-PNPYFSNTVLTKSY---YMVEDEEPILERAEGTDIEWLAGK-NLTQKTLRKKPKKGSKNAKPITKTEQVPSFFNFFSPPTIPED--DMDEQEAEELQDQMEADYDVGSALKEKIIPHAVEWFTGEAQ 325
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|743799239|ref|XP_010925426.1| (PREDICTED: nucleosome assembly protein 1;2 isoform X2 [Elaeis guineensis]) HSP 1 Score: 165.622 bits (418), Expect = 4.180e-44 Identity = 103/288 (35.76%), Postives = 164/288 (56.94%), Query Frame = 0 Query: 37 SGFQQALADAAQGAAEEEGE--EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEG 322 +G AL + Q A + + E ++P+V+ R+E L+++Q + +E F EER AL KY L PL SKR ++ G ++V+ V +P E E + T+ KG+PNFWL + ++ ++A +QE D GALKYL+D++ ++ GF L F F PNPYF N +L+K Y +++DD E IL+ GT I W+ K K+ KG + K + ESFFN+F +P+D ED++E+ E+L +++ DY + S +R++I+P A+ W+ GE Sbjct: 32 AGLVNALKNKLQSLAGKHSDVLETLSPKVRKRVEVLREIQSQHDELEAKFFEERAALEAKYQKLYGPLYSKRYEIVNGLVEVE----GVTNEPAEENQTEDK---TTEEKGVPNFWLNAMKTNEVLAEEIQERDEGALKYLKDIKWCRIDNPKGFKLEFFF-NPNPYFKNAILTKTY---HMIDDEEPILEKAIGTEIEWLPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPDDDEDIDEDVAEQLQSQMEQDYDIGSTIRDKIIPHAVSWFTGEA 308
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|661897936|emb|CDO97903.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 165.622 bits (418), Expect = 5.240e-44 Identity = 109/293 (37.20%), Postives = 168/293 (57.34%), Query Frame = 0 Query: 37 SGFQQALADAAQGAAEEEGE--EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAG-EGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKK----ESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEG 322 +G AL D Q A E + E ++P+V+ R+E+L++LQ + +E F EER AL KY L PL +KR ++ G ++V E +A+ G EG++G + KG+PNFWL + ++ ++A + E D ALKYL+D++ + GF L F F NP+F N VL+K Y +++DD E IL+ GT I W K C+ +K +K K + +G VK I K ESFFN+F +PED +D++E+ EEL ++ DY + S +R++I+P A+ W+ GE Sbjct: 32 AGLVNALKDKLQHLAGEHSDIMETLSPKVRKRVEFLRELQSQHDELESKFFEERAALEAKYQKLYEPLYTKRYQIVNGVLEV--------EGVGDASKGDEGDKG--TEEKGVPNFWLTAMKTNEILAEEISERDEEALKYLKDIKWCRIDSPKGFKLEFFF-DANPFFKNTVLTKTY---HMIDDDEPILEKAIGTEIEWCPGK---CLTQKVLKKKPR-KGSKNVKPITKTENCESFFNFFNPPQVPEDDDDIDEDTAEELQNSMEQDYDIGSTIRDKIIPHAVSWFTGEA 306
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|743799237|ref|XP_010925425.1| (PREDICTED: nucleosome assembly protein 1;2 isoform X1 [Elaeis guineensis]) HSP 1 Score: 165.236 bits (417), Expect = 6.994e-44 Identity = 103/288 (35.76%), Postives = 164/288 (56.94%), Query Frame = 0 Query: 37 SGFQQALADAAQGAAEEEGE--EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEG 322 +G AL + Q A + + E ++P+V+ R+E L+++Q + +E F EER AL KY L PL SKR ++ G ++V+ V +P E E + T+ KG+PNFWL + ++ ++A +QE D GALKYL+D++ ++ GF L F F PNPYF N +L+K Y +++DD E IL+ GT I W+ K K+ KG + K + ESFFN+F +P+D ED++E+ E+L +++ DY + S +R++I+P A+ W+ GE Sbjct: 32 AGLVNALKNKLQSLAGKHSDVLETLSPKVRKRVEVLREIQSQHDELEAKFFEERAALEAKYQKLYGPLYSKRYEIVNGLVEVE----GVTNEPAEENQTEDK---TTEEKGVPNFWLNAMKTNEVLAEEIQERDEGALKYLKDIKWCRIDNPKGFKLEFFF-NPNPYFKNAILTKTY---HMIDDEEPILEKAIGTEIEWLPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPDDDEDIDEDVAEQLQSQMEQDYDIGSTIRDKIIPHAVSWFTGEA 308
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|1109255511|ref|XP_019151653.1| (PREDICTED: nucleosome assembly protein 1;2-like isoform X3 [Ipomoea nil]) HSP 1 Score: 164.466 bits (415), Expect = 9.367e-44 Identity = 94/266 (35.34%), Postives = 150/266 (56.39%), Query Frame = 0 Query: 57 EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEG 322 E ++P V+ R+E L+++Q + +E F+EER AL KY L PL +KR ++ G +V+ + E +A EEGE ++ KG+P+FWL + + ++A + E D GALKYL+D++ ++ GF L F F NPYF N VL+K Y +++D+ + +L+ GT I W K K+ KG + K + ESFFN+F +PED D++E+ E+L ++ DY + S +RE+I+P A+ W+ GE Sbjct: 41 ENLSPNVRKRVEVLREVQTQHDELEAKFNEERAALEAKYQKLYQPLYTKRYEIVNGVAEVEMDKS-------EKSAAVQEEGEAAVEKGVPDFWLTAMKNSVVLAEEITERDEGALKYLKDIKWSRIDEPKGFKLEFFF-DTNPYFKNSVLTKVY---HMIDEDDPVLEKAIGTEIEWYPGKSLTEKILKKKPKKGSKNVKPITKTEQCESFFNFFCPPQVPEDENDIDEDAAEDLQNLMEQDYEIGSTIREKIIPHAVSWFTGEA 295
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|629087218|gb|KCW53575.1| (hypothetical protein EUGRSUZ_J02850 [Eucalyptus grandis]) HSP 1 Score: 165.236 bits (417), Expect = 9.541e-44 Identity = 110/296 (37.16%), Postives = 165/296 (55.74%), Query Frame = 0 Query: 38 GFQQALADAAQGAAEEEGE--EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRM--KPKGKSRGGVVVKQIKK-ESFFNWFEAVDIPEDPEDVEEEEYEELMGK--LDYDYAVASILREEIVPEAIKWYLGEGEEDE 326 G AL + Q A + + E + P V+ R+E LK++Q +E F EER AL KY L PL +KR ++ G ++V DG V E A+A E E+ KG+PNFWL + ++ ++A + + D GALKYL+D++C + GF L F F NPYF N VL+K Y + + DD E IL+ GT I W K C+ EK + KP+ S+ + +I+K ESFFN+F +IP+D ED E +E + ++ DY + S +R++I+P A+ W+ GE +D+ Sbjct: 34 GLVNALKNKLQSLAGQHSDVLESLPPNVRKRVEALKEIQSHHDEMEAKFFEERAALEAKYQKLYEPLYTKRYEIVNGIVEV---DGVVKE----ASAVEEEDKSAEGEKGVPNFWLTAMKTNEILAEEISDRDEGALKYLKDIKCSKIDKPKGFKLEFFF-DANPYFKNSVLTKTYHM--IDDDDEPILEKAIGTEIEWYPGK---CLTEKLLKKKPRKGSKNAKPITKIEKCESFFNFFNPPEIPDDDEDDELDEDAAEELQNLMEQDYDMGSTIRDKIIPHAVSWFTGEAAQDD 316
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|1109255509|ref|XP_019151652.1| (PREDICTED: nucleosome assembly protein 1;2-like isoform X2 [Ipomoea nil]) HSP 1 Score: 164.081 bits (414), Expect = 1.105e-43 Identity = 94/266 (35.34%), Postives = 150/266 (56.39%), Query Frame = 0 Query: 57 EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEG 322 E ++P V+ R+E L+++Q + +E F+EER AL KY L PL +KR ++ G +V+ + E +A EEGE ++ KG+P+FWL + + ++A + E D GALKYL+D++ ++ GF L F F NPYF N VL+K Y +++D+ + +L+ GT I W K K+ KG + K + ESFFN+F +PED D++E+ E+L ++ DY + S +RE+I+P A+ W+ GE Sbjct: 44 ENLSPNVRKRVEVLREVQTQHDELEAKFNEERAALEAKYQKLYQPLYTKRYEIVNGVAEVEMDKS-------EKSAAVQEEGEAAVEKGVPDFWLTAMKNSVVLAEEITERDEGALKYLKDIKWSRIDEPKGFKLEFFF-DTNPYFKNSVLTKVY---HMIDEDDPVLEKAIGTEIEWYPGKSLTEKILKKKPKKGSKNVKPITKTEQCESFFNFFCPPQVPEDENDIDEDAAEDLQNLMEQDYEIGSTIREKIIPHAVSWFTGEA 298
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|565352403|ref|XP_006343134.1| (PREDICTED: nucleosome assembly protein 1;4, partial [Solanum tuberosum]) HSP 1 Score: 164.081 bits (414), Expect = 1.114e-43 Identity = 106/294 (36.05%), Postives = 160/294 (54.42%), Query Frame = 0 Query: 37 SGFQQALADAAQGAAEEEGE--EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMK---PKGKSRGGVVVKQIKKESFFNWFEAVDIP-EDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEGEE 324 +G AL D Q A + + E + P V+ R++ L++LQ + +E F EER AL KY L PL SKR ++ G ++V D EA +GE+ ET KG+PNFWL + ++ ++A + E D ALKYL+D++ +D GF L F F NP+F N VL+K Y + + DD + IL+ GT I W K C+ +K +K KG V+K ESFFN+F +P +D +D++E+ E+L ++ DY + S +R +I+P A+ W+ GE E Sbjct: 13 AGLVNALKDKLQNLAGKHTDILETLTPPVRKRVDVLRELQSQHDELEAKFFEERAALESKYQKLYEPLYSKRYEIVNGVVEVDGVD--------EAPMIQGEDSETENEKGVPNFWLTAMKTNEILAEEISERDEEALKYLKDIKWCKLDDRKGFKLEFFF-DTNPFFKNSVLTKTYHM--IDDDDDPILEKAIGTNIEWYPGK---CLTQKILKRKPKKGSKNAKFVIKTESCESFFNFFNPPQVPEDDDDDIDEDAAEDLQNLMEQDYDIGSTIRAKIIPHAVSWFTGEAAE 292
BLAST of EWM25708.1 vs. NCBI_GenBank
Match: gi|1109255507|ref|XP_019151651.1| (PREDICTED: nucleosome assembly protein 1;2-like isoform X1 [Ipomoea nil]) HSP 1 Score: 164.081 bits (414), Expect = 1.168e-43 Identity = 94/266 (35.34%), Postives = 150/266 (56.39%), Query Frame = 0 Query: 57 EEVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVDIPEDPEDVEEEEYEELMGKLDYDYAVASILREEIVPEAIKWYLGEG 322 E ++P V+ R+E L+++Q + +E F+EER AL KY L PL +KR ++ G +V+ + E +A EEGE ++ KG+P+FWL + + ++A + E D GALKYL+D++ ++ GF L F F NPYF N VL+K Y +++D+ + +L+ GT I W K K+ KG + K + ESFFN+F +PED D++E+ E+L ++ DY + S +RE+I+P A+ W+ GE Sbjct: 45 ENLSPNVRKRVEVLREVQTQHDELEAKFNEERAALEAKYQKLYQPLYTKRYEIVNGVAEVEMDKS-------EKSAAVQEEGEAAVEKGVPDFWLTAMKNSVVLAEEITERDEGALKYLKDIKWSRIDEPKGFKLEFFF-DTNPYFKNSVLTKVY---HMIDEDDPVLEKAIGTEIEWYPGKSLTEKILKKKPKKGSKNVKPITKTEQCESFFNFFCPPQVPEDENDIDEDAAEDLQNLMEQDYEIGSTIREKIIPHAVSWFTGEA 299 The following BLAST results are available for this feature:
BLAST of EWM25708.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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