EWM25706.1, cds4964 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|585107564|gb|EWM25706.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 360.147 bits (923), Expect = 7.293e-126 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK 178 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK Sbjct: 1 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK 178
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1183428598|gb|ORY52885.1| (hypothetical protein BCR33DRAFT_711305 [Rhizoclosmatium globosum]) HSP 1 Score: 134.42 bits (337), Expect = 8.436e-37 Identity = 73/158 (46.20%), Postives = 98/158 (62.03%), Query Frame = 0 Query: 24 ATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPK--------AGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173 AT++++L LL+K T+ QGGARF AG RPPED P KQ+F +A+ AE ++ KA + RW RIV+NDLENIPLGLIIAW SL + SP H +LV F +R+ HT+ YA QPHRA + G+++V+G+ +NGV G Sbjct: 10 ATSLSTLVLLIKFYATLMKQGGARFRAGSRPPEDANAFPDLVKSLKATTVKQTFGVSAEGAEASEKEL---KARMADVRWQRIVSNDLENIPLGLIIAWTSLPTAWSPLLHALLVSLFAAARVGHTIAYAKALQPHRAATWAAGIVSVLGLCLNGVAG 164
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1173938124|gb|OQR88553.1| (hypothetical protein THRCLA_10247 [Thraustotheca clavata]) HSP 1 Score: 124.02 bits (310), Expect = 1.031e-32 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0 Query: 32 LLVKHILTVFVQGGARFGAGMRPPED--VCFMPKAGKQSF---DGTAKAAERGNEDKALK-----KALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLA---VVGMGVNGVL 172 L +K + F+QGG RF AG RPPED + K KQSF D AK + N K ++ +A++ + RW R+V NDLENIP+GL+I+W ++ S +P + ++ FTVSR+ HT+ YA G QPHRA+A+ GVL+ +VG ++G++ Sbjct: 17 LAIKFYASTFIQGGKRFAAGTRPPEDQSLSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSGAIIVFTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLVLVGNSIHGII 170
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1173941117|gb|OQR90357.1| (hypothetical protein ACHHYP_05607 [Achlya hypogyna]) HSP 1 Score: 120.939 bits (302), Expect = 1.781e-31 Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 0 Query: 28 ASLTLLVKHILTVFVQGGARFGAGMRPPED---VCFMPKAGKQSF---DGTAKAAERGNEDKALK-----KALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173 A+ L VK ++ +QGG RF AG RPPED F PK KQSF D AKA E + K LK +A++ + RW R+V NDLENIP+GL+ AW ++ S +P + ++ FT+ R+ HT YA QPHRA A+ GV ++ + N V+G Sbjct: 13 ATAVLTVKFYISTMIQGGKRFAAGTRPPEDQILTDFNPKNQKQSFGLRDPNAKA-EEDDAKKPLKLTPSARAIEADLRWERLVRNDLENIPIGLLAAWAAVNSGGNPLVNSAAIVIFTIGRVAHTFAYANSLQPHRAYAWMAGVFGIMVLVGNSVVG 168
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|669143378|ref|XP_008607251.1| (hypothetical protein SDRG_03396 [Saprolegnia diclina VS20] >gi|530740948|gb|EQC39190.1| hypothetical protein SDRG_03396 [Saprolegnia diclina VS20]) HSP 1 Score: 118.627 bits (296), Expect = 1.541e-30 Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 0 Query: 28 ASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFM---PKAGKQSFDGTAKAAERGNEDKALKK---------ALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGV---LAVVGMGVNGV 171 S L VK ++ +QGG RF AG RPPED PK KQSF +A + ++D KK A++ + RW R+V NDLENIP+GL+ AW ++ S +P + V ++ FTV R+ HT YA QPHRA A+ GV L +VG + G+ Sbjct: 17 CSAILTVKFYISTMIQGGKRFAAGTRPPEDQILTNLNPKNQKQSFGVRHEAEAKTDDDSKTKKPLNLTPSDRAIEADLRWERLVRNDLENIPIGLLSAWAAVNSGGNPLVNSVAIVIFTVGRVAHTFAYANSLQPHRAYAWMAGVFGTLVLVGNSIAGI 175
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|813103138|ref|XP_012194037.1| (hypothetical protein SPRG_18820 [Saprolegnia parasitica CBS 223.65] >gi|641541913|gb|KDO35658.1| hypothetical protein SPRG_18820 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 117.472 bits (293), Expect = 4.717e-30 Identity = 68/174 (39.08%), Postives = 94/174 (54.02%), Query Frame = 0 Query: 13 AFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFM---PKAGKQSFDGTAKAAERGNEDKALKK---------ALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGV---LAVVGMGVNGV 171 AFL N A +++ L VK ++ +QGG RF AG RPPED PK KQSF + + ++D KK A++ + RW R+V NDLENIP+GL+ AW ++ S +P + ++ FTV RI HT YA QPHRA A+ GV L +VG + G+ Sbjct: 2 AFLASVNDTKVLIACSAI-LTVKFYISTMIQGGKRFAAGTRPPEDQILTNLNPKNQKQSFGVRQETEAKTDDDSETKKPLNLTPSDRAIEADLRWERLVRNDLENIPIGLLSAWAAVNSGGNPLVNSAAIVIFTVGRIAHTFAYAKSLQPHRAYAWMAGVFGTLVLVGNSIAGI 174
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|673029106|ref|XP_008868514.1| (hypothetical protein H310_05552 [Aphanomyces invadans] >gi|574476131|gb|ETW03130.1| hypothetical protein H310_05552 [Aphanomyces invadans]) HSP 1 Score: 115.931 bits (289), Expect = 1.573e-29 Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 0 Query: 20 APLQATAVASLT--LLVKHILTVFVQGGARFGAGMRPPEDVC---FMPKAGKQSFD-----GTAKAAE----RGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173 +PL + T L +K +T+ +QGG RF AG RPPED F P +Q+F AK +E G +K +A++++ RW RIV NDLENIP+GL+ AW ++ S + + + AFT+ R+LHT YA QPHR +FGGVL+VV + N G Sbjct: 3 SPLDTKVLIGATGILCIKLYVTLMIQGGKRFAAGTRPPEDQMLKMFNPSKQRQTFGVVDHAAAAKKSEDKPASGLREKPTDRAVEDDIRWERIVRNDLENIPIGLLTAWAAVNSGGNVVVNTGAIAAFTLFRVLHTYAYAKQLQPHRGYIWFGGVLSVVTLVGNSFYG 170
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1173929585|gb|OQR82792.1| (hypothetical protein ACHHYP_15508 [Achlya hypogyna]) HSP 1 Score: 115.546 bits (288), Expect = 1.790e-29 Identity = 61/157 (38.85%), Postives = 86/157 (54.78%), Query Frame = 0 Query: 28 ASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFM---PKAGKQSFDGTAKAAERGNEDKALK--------KALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173 A+ L+VK + + +QG RF AG RPPED F P+ KQSF G + + ED K +A++ + RW R+V NDLENIP+GL+ AW ++ S P + +L FT+ RI HT YA QPHRA + V + + + N V+G Sbjct: 13 ATAVLIVKFYIAIIIQGAKRFAAGTRPPEDQFFSKFNPRNQKQSF-GVRYSNVKSEEDNTKKQINFIPSARAIEADLRWERLVRNDLENIPIGLLAAWAAVNSGGCPLVNSTAILIFTIGRIAHTFAYANSLQPHRACVWIISVFSTIVLVANSVVG 168
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|813165783|ref|XP_012203768.1| (hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65] >gi|641531467|gb|KDO25539.1| hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-28 Identity = 66/153 (43.14%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 23 QATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQ--RWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173 +A +S+ L K +LT +QGG RF AG RPPED F + F+ T +A G D A EQ RW RIV NDLENIP+GLI+AWG++QS + FT +R+ HT YA G QPHR A+ G AV+ M +N + G Sbjct: 6 KAWVASSVVLYTKCLLTTAIQGGKRFAAGSRPPEDKIF------KQFNPTKQAQTFG-VDTAAATTAAREQDIRWERIVRNDLENIPIGLIVAWGAVQSGGVEAVTTCALGTFTAARVYHTYAYAQGLQPHRGNAWMVGTAAVLVMALNSLYG 151
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|698801348|ref|XP_009833703.1| (hypothetical protein H257_09244 [Aphanomyces astaci] >gi|574111295|gb|ETV76791.1| hypothetical protein H257_09244 [Aphanomyces astaci]) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-28 Identity = 63/157 (40.13%), Postives = 92/157 (58.60%), Query Frame = 0 Query: 23 QATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKK--ALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAK 177 +A +++L L VK+++ + R AG+R PED P KQ+F + E G + K + AL +E+RW+RI ANDLENIPLGLI+ W S+ S + + ++ FT RILHTV YA R++A+ GV A++ M V G++GAF K Sbjct: 10 KAAIISTLVLYVKYLVATLIGARKRELAGLRAPEDT---PDQ-KQNFGLVVDSVEDGQQSKEATQQAALLDERRWSRITANDLENIPLGLIVVWASILSGGDTDINGISIIVFTGVRILHTVFYALAWSKPRSMAYMVGVAAILVMAVAGIVGAFKK 162 The following BLAST results are available for this feature:
BLAST of EWM25706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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