EWM25706.1, cds4964 (CDS) Nannochloropsis gaditana

Overview
NameEWM25706.1
Unique Namecds4964
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:816636..816764 -
Alignment locationCM002464.1:816250..816444 -
Alignment locationCM002464.1:815934..816146 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25706.1
ProductMembrane associated eicosanoid/glutathione metabolism-like domain protein
Orig transcript idgnl|cribi|Naga_100333g1.1589.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:816636..816764 -
CM002464.1supercontigCM002464.1:816250..816444 -
CM002464.1supercontigCM002464.1:815934..816146 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001129Membr-assoc_MAPEG
IPR023352MAPEG-like_dom
Homology
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|585107564|gb|EWM25706.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 360.147 bits (923), Expect = 7.293e-126
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK 178
            MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK
Sbjct:    1 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK 178          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1183428598|gb|ORY52885.1| (hypothetical protein BCR33DRAFT_711305 [Rhizoclosmatium globosum])

HSP 1 Score: 134.42 bits (337), Expect = 8.436e-37
Identity = 73/158 (46.20%), Postives = 98/158 (62.03%), Query Frame = 0
Query:   24 ATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPK--------AGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173
            AT++++L LL+K   T+  QGGARF AG RPPED    P           KQ+F  +A+ AE   ++    KA   + RW RIV+NDLENIPLGLIIAW SL +  SP  H +LV  F  +R+ HT+ YA   QPHRA  +  G+++V+G+ +NGV G
Sbjct:   10 ATSLSTLVLLIKFYATLMKQGGARFRAGSRPPEDANAFPDLVKSLKATTVKQTFGVSAEGAEASEKEL---KARMADVRWQRIVSNDLENIPLGLIIAWTSLPTAWSPLLHALLVSLFAAARVGHTIAYAKALQPHRAATWAAGIVSVLGLCLNGVAG 164          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1173938124|gb|OQR88553.1| (hypothetical protein THRCLA_10247 [Thraustotheca clavata])

HSP 1 Score: 124.02 bits (310), Expect = 1.031e-32
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0
Query:   32 LLVKHILTVFVQGGARFGAGMRPPED--VCFMPKAGKQSF---DGTAKAAERGNEDKALK-----KALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLA---VVGMGVNGVL 172
            L +K   + F+QGG RF AG RPPED  +    K  KQSF   D  AK  +  N  K ++     +A++ + RW R+V NDLENIP+GL+I+W ++ S  +P  +   ++ FTVSR+ HT+ YA G QPHRA+A+  GVL+   +VG  ++G++
Sbjct:   17 LAIKFYASTFIQGGKRFAAGTRPPEDQSLSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSGAIIVFTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLVLVGNSIHGII 170          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1173941117|gb|OQR90357.1| (hypothetical protein ACHHYP_05607 [Achlya hypogyna])

HSP 1 Score: 120.939 bits (302), Expect = 1.781e-31
Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 0
Query:   28 ASLTLLVKHILTVFVQGGARFGAGMRPPED---VCFMPKAGKQSF---DGTAKAAERGNEDKALK-----KALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173
            A+  L VK  ++  +QGG RF AG RPPED     F PK  KQSF   D  AKA E  +  K LK     +A++ + RW R+V NDLENIP+GL+ AW ++ S  +P  +   ++ FT+ R+ HT  YA   QPHRA A+  GV  ++ +  N V+G
Sbjct:   13 ATAVLTVKFYISTMIQGGKRFAAGTRPPEDQILTDFNPKNQKQSFGLRDPNAKA-EEDDAKKPLKLTPSARAIEADLRWERLVRNDLENIPIGLLAAWAAVNSGGNPLVNSAAIVIFTIGRVAHTFAYANSLQPHRAYAWMAGVFGIMVLVGNSVVG 168          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|669143378|ref|XP_008607251.1| (hypothetical protein SDRG_03396 [Saprolegnia diclina VS20] >gi|530740948|gb|EQC39190.1| hypothetical protein SDRG_03396 [Saprolegnia diclina VS20])

HSP 1 Score: 118.627 bits (296), Expect = 1.541e-30
Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 0
Query:   28 ASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFM---PKAGKQSFDGTAKAAERGNEDKALKK---------ALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGV---LAVVGMGVNGV 171
             S  L VK  ++  +QGG RF AG RPPED       PK  KQSF    +A  + ++D   KK         A++ + RW R+V NDLENIP+GL+ AW ++ S  +P  + V ++ FTV R+ HT  YA   QPHRA A+  GV   L +VG  + G+
Sbjct:   17 CSAILTVKFYISTMIQGGKRFAAGTRPPEDQILTNLNPKNQKQSFGVRHEAEAKTDDDSKTKKPLNLTPSDRAIEADLRWERLVRNDLENIPIGLLSAWAAVNSGGNPLVNSVAIVIFTVGRVAHTFAYANSLQPHRAYAWMAGVFGTLVLVGNSIAGI 175          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|813103138|ref|XP_012194037.1| (hypothetical protein SPRG_18820 [Saprolegnia parasitica CBS 223.65] >gi|641541913|gb|KDO35658.1| hypothetical protein SPRG_18820 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 117.472 bits (293), Expect = 4.717e-30
Identity = 68/174 (39.08%), Postives = 94/174 (54.02%), Query Frame = 0
Query:   13 AFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFM---PKAGKQSFDGTAKAAERGNEDKALKK---------ALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGV---LAVVGMGVNGV 171
            AFL   N      A +++ L VK  ++  +QGG RF AG RPPED       PK  KQSF    +   + ++D   KK         A++ + RW R+V NDLENIP+GL+ AW ++ S  +P  +   ++ FTV RI HT  YA   QPHRA A+  GV   L +VG  + G+
Sbjct:    2 AFLASVNDTKVLIACSAI-LTVKFYISTMIQGGKRFAAGTRPPEDQILTNLNPKNQKQSFGVRQETEAKTDDDSETKKPLNLTPSDRAIEADLRWERLVRNDLENIPIGLLSAWAAVNSGGNPLVNSAAIVIFTVGRIAHTFAYAKSLQPHRAYAWMAGVFGTLVLVGNSIAGI 174          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|673029106|ref|XP_008868514.1| (hypothetical protein H310_05552 [Aphanomyces invadans] >gi|574476131|gb|ETW03130.1| hypothetical protein H310_05552 [Aphanomyces invadans])

HSP 1 Score: 115.931 bits (289), Expect = 1.573e-29
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 0
Query:   20 APLQATAVASLT--LLVKHILTVFVQGGARFGAGMRPPEDVC---FMPKAGKQSFD-----GTAKAAE----RGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173
            +PL    +   T  L +K  +T+ +QGG RF AG RPPED     F P   +Q+F        AK +E     G  +K   +A++++ RW RIV NDLENIP+GL+ AW ++ S  +   +   + AFT+ R+LHT  YA   QPHR   +FGGVL+VV +  N   G
Sbjct:    3 SPLDTKVLIGATGILCIKLYVTLMIQGGKRFAAGTRPPEDQMLKMFNPSKQRQTFGVVDHAAAAKKSEDKPASGLREKPTDRAVEDDIRWERIVRNDLENIPIGLLTAWAAVNSGGNVVVNTGAIAAFTLFRVLHTYAYAKQLQPHRGYIWFGGVLSVVTLVGNSFYG 170          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|1173929585|gb|OQR82792.1| (hypothetical protein ACHHYP_15508 [Achlya hypogyna])

HSP 1 Score: 115.546 bits (288), Expect = 1.790e-29
Identity = 61/157 (38.85%), Postives = 86/157 (54.78%), Query Frame = 0
Query:   28 ASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFM---PKAGKQSFDGTAKAAERGNEDKALK--------KALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173
            A+  L+VK  + + +QG  RF AG RPPED  F    P+  KQSF G   +  +  ED   K        +A++ + RW R+V NDLENIP+GL+ AW ++ S   P  +   +L FT+ RI HT  YA   QPHRA  +   V + + +  N V+G
Sbjct:   13 ATAVLIVKFYIAIIIQGAKRFAAGTRPPEDQFFSKFNPRNQKQSF-GVRYSNVKSEEDNTKKQINFIPSARAIEADLRWERLVRNDLENIPIGLLAAWAAVNSGGCPLVNSTAILIFTIGRIAHTFAYANSLQPHRACVWIISVFSTIVLVANSVVG 168          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|813165783|ref|XP_012203768.1| (hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65] >gi|641531467|gb|KDO25539.1| hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 113.62 bits (283), Expect = 1.028e-28
Identity = 66/153 (43.14%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   23 QATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQ--RWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLG 173
            +A   +S+ L  K +LT  +QGG RF AG RPPED  F      + F+ T +A   G  D A       EQ  RW RIV NDLENIP+GLI+AWG++QS          +  FT +R+ HT  YA G QPHR  A+  G  AV+ M +N + G
Sbjct:    6 KAWVASSVVLYTKCLLTTAIQGGKRFAAGSRPPEDKIF------KQFNPTKQAQTFG-VDTAAATTAAREQDIRWERIVRNDLENIPIGLIVAWGAVQSGGVEAVTTCALGTFTAARVYHTYAYAQGLQPHRGNAWMVGTAAVLVMALNSLYG 151          
BLAST of EWM25706.1 vs. NCBI_GenBank
Match: gi|698801348|ref|XP_009833703.1| (hypothetical protein H257_09244 [Aphanomyces astaci] >gi|574111295|gb|ETV76791.1| hypothetical protein H257_09244 [Aphanomyces astaci])

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-28
Identity = 63/157 (40.13%), Postives = 92/157 (58.60%), Query Frame = 0
Query:   23 QATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKK--ALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAK 177
            +A  +++L L VK+++   +    R  AG+R PED    P   KQ+F     + E G + K   +  AL +E+RW+RI ANDLENIPLGLI+ W S+ S      + + ++ FT  RILHTV YA      R++A+  GV A++ M V G++GAF K
Sbjct:   10 KAAIISTLVLYVKYLVATLIGARKRELAGLRAPEDT---PDQ-KQNFGLVVDSVEDGQQSKEATQQAALLDERRWSRITANDLENIPLGLIVVWASILSGGDTDINGISIIVFTGVRILHTVFYALAWSKPRSMAYMVGVAAILVMAVAGIVGAFKK 162          
The following BLAST results are available for this feature:
BLAST of EWM25706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107564|gb|EWM25706.1|7.293e-126100.00Membrane associated eicosanoid/glutathione metabol... [more]
gi|1183428598|gb|ORY52885.1|8.436e-3746.20hypothetical protein BCR33DRAFT_711305 [Rhizoclosm... [more]
gi|1173938124|gb|OQR88553.1|1.031e-3242.21hypothetical protein THRCLA_10247 [Thraustotheca c... [more]
gi|1173941117|gb|OQR90357.1|1.781e-3142.68hypothetical protein ACHHYP_05607 [Achlya hypogyna... [more]
gi|669143378|ref|XP_008607251.1|1.541e-3040.88hypothetical protein SDRG_03396 [Saprolegnia dicli... [more]
gi|813103138|ref|XP_012194037.1|4.717e-3039.08hypothetical protein SPRG_18820 [Saprolegnia paras... [more]
gi|673029106|ref|XP_008868514.1|1.573e-2939.88hypothetical protein H310_05552 [Aphanomyces invad... [more]
gi|1173929585|gb|OQR82792.1|1.790e-2938.85hypothetical protein ACHHYP_15508 [Achlya hypogyna... [more]
gi|813165783|ref|XP_012203768.1|1.028e-2843.14hypothetical protein SPRG_20662 [Saprolegnia paras... [more]
gi|698801348|ref|XP_009833703.1|1.782e-2840.13hypothetical protein H257_09244 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4976rna4976Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications